morexGenes - Barley RNA-seq Database

Contig contig_9789

Source Contig contig_9789

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_9789 (1644 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_9789

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_81723	2	777 bp	AK358575	Available	Available	None

CDS Structure of MLOC_81723

Contig Sequence (1644 bp)

>contig_9789 1644 assembly3_WGSMorex_rbca.fasta
GATGTTCCACTACATCAACCGTGTGTTTTTTCTTAACGCTTCTCGCTTAGCGNNCTACAA
GGGTATGTAGATCCGATCTTCCTCTCGTAGATGATCATCAGCATGATAGGTCTTCGCGTG
CGTAGGATTTTTTTGTTTTCCATACAACGTTCCCAACACATGATCCCACTGCCATAGAGA
TGGTCCCACTACAGTTTTTTTCTAGCTTTGTCCCTGCATTAGATCTGTCGCTAAATAACA
ATTCCCATGATTCAATGTAGTGCTCACGAGCGACTGTACTAGCTGATAACCCATTACACG
GACAAAGCAGATCCCCTAAACACTTCAAAATGCAACAAAGAAGAGGGATCATTGAATGGT
AAGTCTATCGAAGAAGGACCAACTGATGATGATATCTGAGGATGAACACCCAAAGCATCA
TGTATGACACTGATAGCATTCTTTTCGTTTTATTCACTATGCATATTATCAGTGGCATAA
GTCAAACAATATAAAGTTTGACTAAGTTTATAAAAGACAATACAAACGTTTACAAAGATG
AATAATGTGAAACTGTATTTCAATGATGAATGATGTGCTAGTTGAGCATAGTGGATGTTG
ATTTTCTTCAAGTATAAATTTTATCAAAGTTTACAAAGCTCAACTGCTAATATGCAGAGT
AAATAAAAAAGAGAGTACACACGTTGGGAGTAGAAATCATTAAGTAGGGATACATTGTGT
AGGCACACAAACAGCACAACTCCAACAGTGGAACTGGGCACGATCGATCCAACAGCGGAA
ATGGCGATCAGTTCTTGGACTTGGGCTGCTTGACTATCATCACGGAGCAGTCCGCGTGGT
GGGCGCAGTAGTCGCTCACGCTCCCGAGCAATGCCCTGCGAGAAAGAGGAGTTCAGACAA
GAGACAGTCACCATTAGTTTCAGACTCGCGGTGAAAGCGTACATTGGAGGAGAAAACCAC
GGACCTCCTGATGGCGCCGTAGCCCTGGCTCCCGACGACGAGCAGATCGGCGTGGTGCTT
CTCGACGGCGTCGCACAGGACGTGCTTCGGCTCCCCGTCGACCACATCCACCACGCCCTG
CACCTGCGGTTTCATATAAGCAGCAATGTGTCATCGTCTCTGTCACTGATGTCTTCTCCA
CATCTGTCCATGGAGGAATGCGACGAGCGGAGAGTTTGGTGGTGGATGTTATGTTATTAC
CGAGTTGGCGGCGCAGAGGCTGCGCGCCTTGTCGACGACGCCCTCGGCCTTCTTGCGCAG
GTCGGCCTCCACCAACCCCACCACGTCGCCGGCCACGCCTGAAACAAATTCCCAGAATTC
AGTCAGAGCTTTGCTCCAGTCCAGTCCAGAGGACGAACACGGAACGATGAAGCGGTAAAG
AGGAGGCTAACGCACCGGGGCCGCCCATGTTGACGGCGGTGGAAGTGGGCGGCTTGGCGT
GGATGACAACGAGCTCCACCGCTCCGGCGCCGGCCATGCCGGCCGTCGCCGCCACGTGCC
GCACGGCCCACTCGAGCGCGCGGTAGCTTGCTTCGCTGTCGTCCACGGCGACCAGCACCA
CCGTCTTGCTCCTCCCCTCCACCACCGGACTCGCCTCCACCGCAGCAGCCACCGTCTCGC
TCCTCCCCTCCACCACCGGACTCG