Contig Data
morexGenes
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Map Locations of contig_97888 (4761 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_97888

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81721 2 1203 bp MLOC_81721.1 Available Available LOC_Os05g23130.1, FRAME:+2, EVALUE:3e-12, 13105.m02343 protein expressed protein





CDS Structure of MLOC_81721






Contig Sequence (4761 bp)

>contig_97888 4761 assembly3_WGSMorex_rbca.fasta
ATTGTAGGAAATTGAATAAAGCTACTAGAAAAGATCATTACCCCTTGGCTTTTATTGATC
AAATGTTAGAAAGATTATCTAAGGACACACACTTTTGCGTTCTTGATGGATATTCTGGTA
TCTTTCAAATACCTCTGTCAAAAGAGGACCAAGATAAAACTACCTTTACATGCCCTTTTG
GAACTTATGCTTATAGGCGTATGCCTTTTGGTATATGCAATGCACCTACTACATGTCAAA
CATGTATGACTCGTGTATTCTCTAGCTTTTGTGAAAAGATTGTTGAGGTTTTCATGGATA
CTTTTTTCGTTTATGGGATTTCTTTTGATGATTGTTGAGCAACCTTGATCGAGTTTTGCA
AAAACGTGAGGAAACCAATCTTGTCTTGAATTGGGAGAAGTACCACTTTATGGTAAATGA
AGATATAATACTTGGGCATAAAATTTCCGAACGGGGTATTGAGGTAGATAAGGCCAAAGG
TGACGCAATAGAGAAAATTCCATGCCCAAAAGATATCAAAGGTATAAGAAGTTTCCTCGG
TCATTTTGTTTTCTATAAGCGTTTCATTAATAATTTCTCAAAGATTTCTAGGCCATTAAC
TATTCTTCTTCAAAAAGATGTTCCTTTTGTTTNNNNNNNNNNNNNNNNNNNAGCCTTTGA
AATACTTAAGAAAGCCAACACATAGCATAAGTAGTTCCTTGCAATTTTATCATATTGGAA
ACATAGAGAGGTGAAGCTTTGGTTCATCTCTCATAATAATTGCAAGTAGGATCAACAAAC
ACATGCATATTATATCCATNNAAATCATCATGTGTAGTGGTAAAACGTAACCCATCAATA
TAATTCTTAATAAGTGCAAACTTCTCCCATATGATGTAGTTGTGAGAATTCAAAAAAATA
ATAGAACTATCATGTATGGGTGCAATAGCAACAATTTCATGCTAACATACAACATACACC
TACTTGCATAGGATTTGCGTCTCTTACTTGAAACGATTACACAACATAATCAATCCAAAC
TACTGAAGAATGGCAATGGATATACACATCCAAGCTCGAAGTACAATTGTAAGTGACCAC
ATCGTTTCTTTTTGTGTGCTTCTCCAGTCTTCCCCAAGTTCATCCCCGTGCATGCGTTGC
ACGGCGCTTGTCGTGCACTAGTGACCAGTCCATGCACGCATTGCCCTCCAGAGTTCGAAC
GCCACCGTGCGCCGGTCTCGGGTGCGCGGCGCCTCGTCGAGCGGCCGTCTTAGAGAGCAG
CCACGACGCACACGACGGCGGTGAAGAACGCAACGACGGGTCCGAGGCCGCTGGACTTGA
CGACGCTCGCTCCGCCAGCGTGGTCGGCCGTCTCGGAGACGGGACCAGGAGCCTCCGCCG
CGGGCCCCTCCCCCTCGGCGGCGGCGGGGGTTTCTTCGGTCGCCGGCGAGCTTTTGTCGG
TGGAACTGGTGACCTCGGCCATGGGGGCCTCGCTGGCAATGGGCGTGTCAGGCGGGAAGG
CGGTTTCTTCGTTGGACCCTTTCGATCCAGGGCCGGCGGCGCTCGGCGCTTGAGAGACGG
AGTGGCCAGGGGCCCTGGCCCTGGCCTTGGCGTCGGGGGCGCCCGCTGGGGCCTCCTCGC
TCTCGGCGGTAGGACCAGAGGCGCCACCTATATCCATGACGAAAGCGTGGTGCCCCGGAG
ATTTGGCGTCGGGGCCCATGGCGGACTTCGGAGCGCCGGAGGCAGGGCCCATGGCGGACT
TCGGAACGCCAGAGGCAGGGCCCATAGCTGCTGAGCCATACCCCGGGGCGCCGGCGGCAG
GGGCCATGGCTGCCGAGCCATACTCTCGGACGCCAGCGGCAGGGCTCCTGGCATGTGCGC
CGTGTTCAGGGGCGGAAGCGGCAGGGGCCATGGTCGGCGCGGCCGCGCCATGCCGCCGGC
CGCGTACGGCAGCTGGGGCCATGGCAGTCGCGTCTCCCCCCGGAGCACCGGCGACAGCGG
AGGCCTTACCCTTACCGTGTCCTCCCAGCGTGCTCTTCAGCATCCCAATGGTCCCGGACA
CGCCAGCCTCGAGGGTGTTGACCACCCCGACCGCCGCGCCGTGCGCCTTCGACAGCGCGG
CGGCCGGCAACGACGTGGCCTTAGACTTCTCCGGAGAGGCAGCCGGCGGGGCCGCCGCGA
GGACGGGGGAGGCCGCCACCGCGAGCACGGCGGCGACGACGAGGATGCATCCGGCGAGGG
CAGGGACGGGAGCACGGGCCATGTCGCGTTGCTGCGTTCGTGCTCGTTCACATGCAGGGT
AGGTGCGTAGCGAGCGCGAGCGCGGCGAACTTTTGACGTAGGAAGACCGAGACGGTGGTG
CAGTTATACAGCCATGCGGAGGCGGTGACTATCTTTGACGTCGGCATCTTAATTTGTCAG
CGGTGGCGCGCGACATGCGGGCGAATGCATGGACGCTTAATTTTGTCATCTGCGCCGGAC
TGGAGGAAGACGGTGCACGTGACGTGCGATCGATTGCAACGGCGCGTGGACTATTGGAGT
CGACTAGGCTGCTTTGCACAAATTGAGCCTGCATGGTTGATCTGTTGGGCAAACAATGCA
TCTCATACACGTGCTGCCACACCACAGCATCTACTGTAGAGTACACGTATCTTTTTTTTC
AATAATAAAGCAGCTACAGGATATTTTGCGAAAAAATCCCTCTCTTTTGAAGTAATTAAT
CCGTCGTCCTTATTTAAGTGACTAACCAGAAAAACGTTTCGTTTTTACAAAAAGAGCCTA
GCGTTTTGGAGTATTCCACCCGAGATCCTTCTCTTAAGATAAGGTTTCGTTTTTGTGTAG
GGGCAGTGCGGTGCGCGGGGTGCCATCAGCACCCACTCGCCGACGCCACCACCAAGGCGC
GGGACAAGGCCAAGGGCGCGCGCAAGCTGCGTGCCGCCGACGTCGCGCTCAACCACCGCC
TCGTCTCCTGGCGTGTCGTCGGCGGCGCCGGGGACGGCCCGGCGGCCACGGACGGGTACA
ACTACAGGGGCGCCGATCTCGAAGTTGCCGCCCCGAGAGGGATCTCTGACCTATACGACC
TCGTCCTCGGCCTCCAGGCCGCGCCGGGCGGTCAAAAAGACGACGCAGACGGCACGGCGG
CAGCGGCGGACACCGACAAAATCTAGGAGCAAGATGCTGAAATTACCGACGATGTCGACG
AGGACGAGGAGGACGACGACGACGGGTTCTGCGTGGTGCGGGGCATCACCATAGCGCTCG
AGTTCTCCGACGTGGAGGAGGACTGGATCGTGGTCTGATCCGGACTCATCTCATTCATTT
GCAAATAAGACGGCGTGCAAGTGAGGTCAGCCGTCCGCACCCTTCTACATCCGCTGCTGT
TGCGCAATTACCTTCAAAGCTGCATCTGCTCTGCTCCTGTTAATTCATCGTGCCCCTGTG
TGTATACTGCTCTATTCCTGTTAATTGATCGTGTCCCTGTGTATATACTATATGGTGATT
GTTTCTTTCTTTCTTTCTGATTGAATGGATGGATTCCGGTGTGGATGTGTCTTTCTGAAT
GTGCACTTTTAATCAGTTCCCTTCTGAATAGAAACTATATGACGATTTGAATGGCCGATC
GGCTTTTAGTGTGTGATGAAATCTGGTGAATTCAGTTCTTGATGTGGCCATGTTTTGTTG
TGAATGCTAGATGCAGGCCGCGTGGTTAGAGCATCTCTAGCCCTTCCCTTAAATATTTAT
ATAACAAGAAGCAAACCCTGTCCGGATTTTCTCTGGGAGCGACCCATTTGCCTATTGAGG
TGTTGGGGACTTGCTCTCGCTGGTCAGTATCAGTCATTGGTTGTTTTACCTTGACACTTG
GCTTCCTGTGCCTGTAAGCATCGGCTCAAACAAACTTTGTTCCGCATGATTTATTTACGA
CACCAGAATATTGTGTTGTGGACGCTTCGCCATTCGTCTGACGCTGTTGAGTGAGGAGGT
GCTTCCGGACATGAAATAGGGGGCAGAGAAGCTAGGCTGCAGATGCATCCACGCGCCGAC
TAACGCTTCGTGCAAACTAGGAAGGAGGGATAGGGACAGGCGAGGGGCCAACACAGGAAC
AGAAAAAAAGCAAGCTTTGGAGAGACAGGCGGAGAGCACGAGCGAGGAGGTCGGGGCAAA
ACACTACTCTGAGCATTTGGTTCACGCTAGTTCCTACCTCTGTTATGTCTGCGTATGTAA
TTATGCTGGCTGCTCGTGGGATATTCAGATTGAAATGTCCCACAAATAGATTTGTTTGTC
CACGGCGTCCACGTACAAATTTATCCAGCCTAAATTAGTGGGCGCGGTCTTAAATCATGA
TTATTGGTTAAGAACATGTTTTTTTTCTCCCATTGCAACGCACGGGCTCTTTTGTAGTCT
TTTTTTGAAAAGAGAAGCAAAAGTTTTGACTTTTTCATTAATTATAAGAATACAATGCTA
GGTTAATTAGAAAAAATCGAGCAAAAATCGATATAAACATAGCTAAGCTTTCTCGATATC
ACGACGCATCAGAGCCACGTTCACTCACCCCCAACATGGCACACACAATAGCCATCCCAC
AAATCTCAAGCGGAACTTTGGGCAATCCCCACCCTCTACTTATATCAAGGTCAAGGTTCG
ATAGTAATGGGCGGTACGCCAAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNATATCTATCCAGAACATATCGCCGGTGTTAAGTTGCGAGTCCCAC
CGAAAGTGTAAAGTCAAAGCA