Map Locations of contig_97864 (4856 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_97864

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81720 3 2757 bp AK356019 Available Available None





CDS Structure of MLOC_81720






Contig Sequence (4856 bp)

>contig_97864 4856 assembly3_WGSMorex_rbca.fasta
CGCGCCATGGGTGCCGGGGCGCGGGCGGGGGGGTGTGTGGCGCAGGGTGGGGTGGGGGGG
GGGGGGGGGGGGGGATTTTTGGAAGAGCAACAAGTGTAGGGTTCTACCCAACCTAAGGAA
CCTTACCATGCTTTTCTTTCTCATTGTTTCCTCTGGTTTTCCGATGCGTGCTCACGTGTT
CATGACCTTTTGATATATGCAATTCAAAATGAATCCAAGGATCGAGCATGTGATATATGC
AATTCAAAATGAATCCAAGGATCGAGCATGAGTAAAGTGAACCATAAGACGTTCCACTGC
TATAAACTCCGTATATCACAAACCCCACACCATAGTTTTACAATTTGGGTCAAGCAACAA
CGAGCACATAGACGAAATTGTTCCAAACCACACCAGCCAAGATCAAGAAAAAAACAAAGA
ACTTGCTGAATACAACAGCTATCAACTCACAAGGGGCAATGAGCTCTTTTTTGCGTTTAA
CCGAGGCAAAAGAATTGAATCATCTCCAAAGAATAATACAATACAACACAATATACCATG
GTATGGGAGCAAGTACAGACAAGTATAACAACAACAACACTTTCTACAACGTGGCTGGGC
TTTCCTTTCTTACACTAGAATGATAGACAGATTATCTCTATCTTCTATTCTCATCAAAAT
CAAAAAAAGAATGAGGGGGTGAACTGGTTTGCGCCTTCGAACAATGAATCGGGGTAGAGG
CGGATTATCTGTACAATGGCATCCAGATGTTGCTTTTCCTCGCACGCAACGAAAAAAAAG
GATGCCCGGCTCTTTTCTCCCGCGCTCTAGTAAATACATAATAACAAACAACATATAGCT
ACTAAATACTCAAAAAACCAAGACTGTACTTGTGTAGTACGCGTCTGGCGCACCTCAGTT
TCGGTGCGGTTTCCCCCAAGGTTTCATTCAAAATTGGAGGCGAGGCCTGTTCATCTCTGT
CCCTGGCGATCATCAGCTGATTCGCTGTGAACAGCTCCTTTCACCTTTTAACTTAGTTGG
GGTTTGCTGGAAGAGACGCGGTTAACCAAGGTTGTGTGGGCATTATGCTGAGCCGTCACC
TCACCTGTCAGAGCTCAACCTCGTGAAGATCCTCCGTTAAACCGGTAAACTGGACGGACG
AGTTGCTGTTGGAACGACTGTGCGAGGGGGGTCTGCCAGGCATTTGTGGCGAGGGCACAA
TCGGTCCGTCAGGTGACCTAGCCCCCGCCGTGGAACTGAATTGGTCAGAGTATGTTCCAC
TCCATGATGCTGCCCGTGATCTTGATGCGAATGAGCTGCTGTTACTTCCCGGGGACATCC
AGGGTGCCTGGTTCGGGGTAGCAATGTTGTCCATGCTCGGATACCGCTGAATGGTAGATG
ACATTCCTGTCGAAAATTGTGCTGCTGGCGGGGGTGATGAAAATGATGTTTCTGCTGGGG
GTGAGGATGAACGCTCATCCCGAGGGAAGGTTTCGCCACGTGTCTCCGCTGATTGGCTAG
GCATCTGCTCTGCAGCGACAGCAGCTGCTGTGGGAACAAAGAACCTGGCACCAGTAGGTG
GTGTCACAGATGGAGCAGCCGGTCTATTATAAGACTGGGCTGCTCCAGTTGCACCAGCCT
TATTGAATGTGTCCACATATCTAAAATGGACAAAATGCTAAAGTTATCTTGTTGACAGAA
AAATTAGAGAAAAGGAACTGAAAGCAAATGTCATCAGTACTGAAATACCTGGACCGGACA
CCCATTCGTCCACGAGCAGAGAACTGGTTCTGGCTGGGTGGAATTGGTGGCATCCCCAAA
CCATGATCTGAATGTTTTGGAGATCTTTGTTCTGCCACTCCATTAGGAATATGCATTCCA
CTAGCAGGGCCATTTAAGTTATAGTCCGGCATTCCATTCTGGTATGAGGAGGATTTTGTT
GGAGGTGGCGCGAGAGGAGGCTCCTCAGCAGGAATCTCAGCACCTTCCTCTACCCATCGC
TTCAGCTTTTCATCGTAGTAAAACTTGTTCTGTTGCCCTAATTTTGCCTTCGGAACAACA
GGATTTCAGCATCAGCATTGCTATGTTGATAAGACAAACTGAACAATGGCGGAGATACTG
CAATTTATAACTCACCTGGCGGGATTTTGAAACAAATCCCATTGTCTTCTGCAGCGTGGA
GCCAATCCAACCAAATCTTGAACCCGATGCACTGCTCTGTGTATTATCCGATCGCGAACC
CTGATAGATTTATTCAATATGAAGTGAGAAGGGAAAATTAGAACATCTTCCTTGCAGAAC
ATCCATCAATATACGAGCTGCTACATCTCTCTTCCTCTATAAAAAAACATATATACCTGT
TTTTGTGGTTTGCCGAAGTCTGGTTCGGAAACACTTCTGTTGTGTGCAATCTTCCTGCCA
GCGCCACCACTATTCTCTGCCATTTCAGTAATAGAATGCACTGAAGGGGATGCAGTTAAC
GATGACATCGTCATTACTGATTGGCTATTTACAAATTTTGCAGCTGCAGGTGCTGAATAG
ATTTCCTTATCACCAACAGAGCCCTGTGGCACTGGTGGAAGTGTTGCGGATGGTGTGCCC
ATCATGCGGGATATAGATTTATCAAGCGAGGTAAATAGCTTCCCAACTAGTTTCGCAGGG
GCCAAATTCGTTCCATACCCACCCTAAAAAAGGTAAAGCAAGTGGGTTAGTGATTAACAA
AGGAGGTGCACACCTCAGCTACAATGTAGAACAGGATTTGGAATCCAGTAGAACAGCATA
CACACATATTATAATTATGTAAGGTTGTACCTGCTGGTGAGTGCGTATCCTGTCCTCCAG
GGAGGAAAATAATTGTTTCCATGCTTCCAATTCTGGTGCACGGCCGGAAGCTTTCAGCAC
CTTCATAGAAGCTTGGCAGTACCTTGAAGAGATGATTTAGTTTGGTCATACTGTGCAAGA
ACAGATTCTAGAAAACACCAGGTTATTGTCTAATCATGCAAAACACAAGGCAATAACCTA
CCTCAAGGAATCAGCGAGCCTTCCCACTTCCGCAAGCATGTATGCATATATTAGCTTGTA
TGGCTGGAAGGGTAGTAGGATATACTGAGAATTACCAAGCACCTTTGTATATTCATAAAC
CTCTGTCCTCTGTAGTTGCATTTCAAATATATTAGCCCAGAGCAGTGAATGGCAGAAAAC
AAAAACAAGTAATAGACTATGCAAGATCATGCATATGTATCCACATAATGATTGTTTAGA
ACACACTGTGGATTCAATATACAACACAAGAAAGTTTTGAAGTAAACTTGCACTGAGCTT
GAATTTTTTTGCAGGTAATAAGGAAGCTGTAACAGACCTGAATGGCTTCAGGGCTGGCAA
ATGTTCGAGGAGATTTCAAATGGTCTGCACCAATGAGACATAACCGAGCACTTTCAGAGT
ATGGGTCAATGTTTAGTTCAGCGACTAAGTAGCATGAATGAGCAGCTGCAACCTGTATCA
AGTAGCTCCATACGGTAATTGATCACAAAAAGGAAGAAACACATATAACTCCGAATATGT
ATCATACAAACCTCATTTTTCTCTTTCCAAAGGCAATCTCCAAGATGGGTAATAACTAGG
TCATCACCTTTTGTCCTGTTTGCAGTTATAATAGCCAAATTCTCTTCCCAGTCATCCAAC
ATACCATTAGGATTAGTCTGTCCCATGGTAACACGGAGTTATGAAGTCAGTCACAAGTTA
AGCAGAAATTCAGAAGTTAGAAACTGGACTAACTGATACATACAATGATAGTAAAAAGGC
AATCATTTTTCTAAGCAACATTGAGAACCCGTGACACTAGTAATCAATAATATCTTGCTT
TCATTTCAGTGCAGTACCAATAAATAAGGAGCACTGTTAGGAAGTATTAGTATTGGTCCT
TCAATAAAGATAAGTTGCTTTCCTAACAAGCACCAGCTCTAATAAAACAAAATGACAAAT
AGCCATACATACACCAACAGAATGGCTTACTACAACTACTTAGTCTCTTTCACAGCATTG
AAGTGGGATCAGAGAGTCAAGCTATTGCAATAGTTATACTCTTGACTTCCTCAATGGATA
AAAATTGTGAAACGGATCTTCCTAAGATAATGAGCAAATATCTGAACAGGAGGAATATAT
TATGTTACATAACAACATGAGAAAGACAGTGCCTATATAATAATCATTAACTGTTGAAAA
TAACAATGCATCTCGCAAGTGAAGAAACAATAACTAAGTAATTACCTGCATAGGTTGTTG
GGATGCACCTAGTGTATCATAGTTGATGTTGCTGTTGTTCTCTACATTAAAAACATCTGC
AGGTTGACCAGCAATGAGAAGGCACAATGTTCGCAAAGGTGACCCAGAAATGAAGTGGCA
CTGAGCCATTTTCTTCACGGTATCCACGTAGAACTGCATAACCAATCAAATGAAGGAGAA
AGAAAACTAATTCAGGGAGCTGGAAACCTGACAGCTAAATCAAGCAAACTGTTACAAATG
AAAGAAAGAAGTTTAATCAAGTTAAACTAACGTTATCGCCAAGTTGTAAAGCGAGTATGA
CTGCAGGCCCCCACAGTTGACCTTCCTGAGCATGCAGAAGAGCCTCTTTTCTTCTGCCAG
ATACTAGAAGAGCTTGTACCTCTTGCGCAACAGACTACAAGCAGAGTAGTTGCCTCAACT
GGGGGATATTTGGTTAAATATGGCATGACAGAGGATATAAGAAGTACCTGCATCTGACTT
TCAGAGGGGATATTTTGCATGAAACCAAAATTCGACCCAAAATCTCCCATATGATTGCTA
CTTCTCTTGCAAGATGAAAAGAGCTTGGTTACTGCCATCTCTGGACCGTCTGTATC