morexGenes - Barley RNA-seq Database

Contig contig_97475
Source Contig contig_97475
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_97475 (10162 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_97475

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_81660	4	2634 bp	AK362230	Available	Available	None
MLOC_81659	1	2126 bp	MLOC_81659.1	Available	Available	LOC_Os02g40440.1, FRAME:+3, EVALUE:0.0, 13102.m04506 protein GDSL-like lipase/acylhydrolase, putative, expressed
CDS Structure of MLOC_81660

CDS Structure of MLOC_81659

Contig Sequence (10162 bp)

>contig_97475 10162 assembly3_WGSMorex_rbca.fasta
AACGCTTTCGCGTAGCGATCTTCAAAGGTACGAAGATGCTCTACCCCATTACTCGTTGCT
GGTGTCTCCTAGATAGATCCTTGTGTGACGTAGGAAAATTTTCGAAATTACTACGTTCCC
CAACACTCCCCCCTCGTCAGATCGCGGTCCCTTCCATAGCCATATGCATTGCTATCACCC
TCTCTGGCATCAGAACCGCGTCCAGTACCCGGATATCTGCCAGTTCCTCTTCCCCTCCTC
GGGGCAAGAATGAAAGGACCTCATTCAAGCTTGGATATGTCATGTTCCCCTGTGCCACAC
TCCTCATGCCAATGTCCCAATTTTTCACATGCATAGCAGGAATTTGGAAGCTTTTTGTAC
TTTACTTGGAAAAATTATGTCTTACCCCCCCCCCTTTGAGAAGCTCACAAAGCGAGTAAG
CTTCTTGTTGACGTCCAACTTCACTCGAACCCTAATAAACTGTCCCATGCAGCCATTAGG
GAGCTTAATCGGAACCTCCTAAACTTCCCCAATTCTCTATGCCATATTCTGCATGAACCC
TTCGTTCCTCAGCACTCCATCAGGAAGTTTGTGAATATGCGTCCAAGTTTCGATCTGATC
AAGTGTGATGCTTTCTGGGCTGGAGAACCCATCATACTCCGCAATTATCAGCGCTGATCC
GCGGAAGTCCCACGGACCTTGATGGATCGCTTTGTTCCAATCAACTAGGCAATTAAATTG
TATGGAGAATGAGTTAGGGTTTACCCTCCTCCAGACCACATCTCGTGTCGGGTTCCAGGC
ACCCCTCATATCGTCAATTAGGACTCCTTGGCTAAAGCTCTTCTCCGTTAGTACGTGTGC
GAGGGCGAGCCACTTCAGCTGGTCCCCTGGATCATCAACTTCGTCTTCCCACACCAAATT
GTCCAACTCATCTTCCTCCGGATGCAAGCGCTCCAGAAGCTTACTCGGATCTATCTTCGC
ATTACCCTGGGAAACTCCAGCACTCGAAGACACCGCCATGGATCGGCAACACGAGAGCCC
CAAGCAAGGAGATACAGTCTCCCGATCGCGAAGGCAATCAGAAAGAGATAAAAAAACCAA
CTTGTGGCGACGGGCACCCGAGGACTTCAAAACCCTAAAAGAATAGGGGACTTCTTAGAC
GCCGGGTCTGCTTAGTTGCGCGGCGGGCGGTCTCCTCGCGTGTGGCATCAGACGCGTAGT
CTGGTCAGCCGCGCCGCTGCATCATCGCCATCAGACGCGTAGACTGGTCAGTCGCGCCGC
TGCCCTCTATTCGGTGCACATGTCGTGTTAATTGCCCATCATGTGAACAATTTCTTTTAG
TAGGTTTTTTCTTAGTAGCGTAGCTATACTCATGATAACTGAAATTCTCTTCCCACCAAC
CAGCAAACGAGACAGCCGTGAATTAAAGCATATTTTCCTCTGTACGAACGCTAAATACCG
GCACGTACCGGCCGTGCAACCCCCCTCCTTTCGCGGGCACAAAGGCTTCTACAACCTGTG
CCGCAGTCACACGCTGCTTTACGGATCGAGCGCACGTCTCACGAGGCTCCACCTACCTAC
CCGTCCCCCAACCACCTCGCATCTACGGATTTCCGAGGGTGTCTGTCTGTCCATCAAGCT
GCCCAGACGGCCTGTATAATAAAGCGCACATTCGATCGCCACCTTCTCAGTTTCCCAGCG
CGCGCGTAGCCTAGCCACCCGTGCATATCTATTCTCTCCAAATCTCAAAGCGTCCGTACG
TCGCGCGCGAGCAGATGGGCGGCGCTCTCGTTCCTCTCCTCGTCTCCGTGGTACTACTCG
TCGTGGCGGCGGCGCGTGCCCCGGCGGCCTCCGCGGCGCCGCGGGCATTCTTCGTCTTCG
GCGACTCCCTCGTCGACAACGGCAACAACAACTACCTCCTCACGACGGCGCGCGCCGACG
CGCCGCCCTACGGCATCGACTTCCCATCGCACCGCCCCACCGGCCGCTTCTCCAACGGCC
TCAACATCCCCGACATCATCAGTAAAATACAATACACCCCATGCCTCATTTCCTTGTTGA
ACTCCAACTGGAGTACGTAACAACATGCCACGTGACGCTGCCATTTGATATTTCGATTGC
TTCAGGTGAGCACCTCGGGGCGGAGCCTGCGTTGCCGTACCTGAGCCCGGAGCTCCGGGG
GGCGAAGCTGCTCGTCGGCGCCAACTTCGCGTCGGCCGGCGTTGGGATCCTCAACGACAC
GGGAGTGCAGTTTGTACGTGCTCTACGAGAGATATGAATAATGCTCAGCTCAGCGCGCCC
TCACATTTCCCTGACAGATTAGCATGCATTTGACGGCTTATGTATGATGGCATGTGCATG
ACGGATGGAGCAGGTGAATATAATTAGGATCGGAGATCAGCTGCGTTACTTCGGGGAGTA
CCAGCGCAAGCTGAGGGCATTCGCCGGCGAGGAGCAGGCGGCGAGGCTTGTCAGCGGGGC
TCTCGTGCTCATCACATTGGGAGGCAACGACTTCGTCAACAACTACTACCTGGTGCCCAT
GTCCATGCGGTCTCGCCAGTACGCGCTCCCGGACTACGTCCGCTACATCGTCTCGGAGTA
CAGGAAAATCCTTGCGGTAAGTCCCGTGCAGTTACTTACTTTACAGTTAAAATGTTGTTT
CATATTAATTCGTGCACAATGCACTAAGTACTACTCTATAAGTTAAGAATTACTAGAAAG
TACGTTTAAGTGAGTGTGTTGCTTAACTGCAAACTGACATGCGCAGCAGCAGTAGCTACT
GTATGTGTACTACGAGTAGTATCTAGCACCAAGACAGATGGGATAAAAAACGCAAGTGCT
AACTGTCATGACACATATGATAGAGTGACAGACCGACAGATTTGGTACTATTTTGATTTG
TGCACATTGCAATACAAAAAAAAAAATGTTGCTCCAGCTGCAACCTAACATGGCAGATTT
TGTGCACGCTGCGGTAGAGTTATGACCGAAATGAAGCAAGAAGGAAGACCTCTACATAAA
TGGACGCCAGATTGACTCTACAGTTCCAACGATCGAGTACTGTTCGTGAAATAAGTTTGA
GCACATGACAAAACATAGACCAGCCAGGCTGCAGCAGTTCATGACCCACCAGTCAAAGTC
AACCGGTCATAACTCTACCGTGTACACCCGCACATGCGGCATGAAACCTCTCTCGTGTAC
ACCCACACACACGCCTTTTGCCCCAAGCTGTAAAGACAAGCATAAATGGAGCCAGCAAAG
GGTATTACCATACGTGCAGGGTAAAGACAGCCGTATACACATGGCGACCCATGGCAGTTG
CAGCATTCACTCCTGGCGCGCTGCAGCACGTACGATGCATGTGCGGTGCAGTGCAGCAGC
TTCTCGAATCCACTTCACCCGCCTTCCATGCCATACCAAGACTCCAAGAGTGACATACGC
GCCGATGGACGAGCTGACACCGCGTGACTTACTGTACTTGACACCGTGGCCCGTGCAGAG
GTTGTACGAGCTTGGGGCGCGTCGCGTGATCGTAACGGGGACGGGGCCGCTGGGGTGCGT
GCCGGCGGAGCTGGCGCAGCACAGCGGCAACGGCGAGTGCGCGGCGGAGCTGAACCGCGC
CGTGGACCTCTTCAACCCGCAGCTGGTGGACATGGTGCGCGGCCTCAACCGCGACGCCGG
CGCCGACGTCTTCGTCTCCGCCAACACCTACCGCGCCAACTTCGACTACCTCGCCAGCCC
GCAGAGCTACGGTACGTGCGTGCTTGCTTGCGTTGCAGCCGGCCAGAGCGACGGTCGAAC
GCTGCCGTGTGATCGTTGTCAACAAACTACAGTAGTAATAGGTTCTTGCGGTGTTGCGTG
CGTGCAGGGTTCACGGACGTGAAGGTGGCGTGCTGTGGGCAGGGGCCGTACAACGGGATC
GGGCTGTGCACGGCGGCGTCCAACGTGTGCGCCAACCGGGAGGTGTACGCGTTCTGGGAC
GCCTTCCACCCGACGGAGCGGGCCAACCGCATCATCGTCGCCCAGTTCATGCATGGGTCC
ACCGACTACATGCACCCCATGAACCTCAGCACCATACTCGCCATGGACCAGGAGGGTCCT
CTTTAGCTAACTGGTTACCACTGCTATCCAGACCAGTGCTGCTCTCTCGGTCAACACAAC
AACAGCTTAGCTTGTGTGGACTGTCGTGGCATTTCATCTCACTCCTCAGCTTGGAGTACT
ATTGTTTTATTTTATTTTGAGTTGGTACTATTAATCCTCCTCATCCATCGATGTCACTTG
TGCTTGGCCAGAAATAGTTTGCTCGTAACGGCAGGTATGTGCGTTCATAGCTCATAAGAG
TGGGTGTACTTGTGTGTATGTGATGTGTTTAAAAAAAAAGAAAAAAAGATAGTTGACCAA
GTAAGAGCTATTAGTGCTGCATACAAATGGCATGGATATAATACAAATTAAAAAAATCAT
GCATTCAGCTGAGTCACAACAAAAGTTGGACAAGCTGCATATAGTCCGTATGTTTCAGCC
GAGTCACATGATCAAATTTTCCCTGCCTCCTCGTATGCATGGTTGCATGCTAGAAGGGTA
AAAATGCAGGAGCAAAATGCTCACGACGGCTGCAAAAGCACAAACTTGCGCAGCATTCCA
ACGAAATTTGAGGCTGCTTCGCTGCTTCCCATGTTTATTAAGTCAGTGGATTAACTACTA
CACATTTACAAGTGTATCTCTGTAGAGCTCTAGAGGTGAGCAAATTAGCCCCATCAAAAT
TTTACTAATCAAGCAATGAGAAGACTGGGACACCCTTGGCACTGAAAGTCGCGCATTTCA
CAAGCACTTCCTCTCCAACCTCAAAGTTAGTCTGGCTATTTTCCTGCAAAAATATTCACC
CGAATTTCAGCACCAAAGACCAAAAGATGACATTACCACAATGGGTTCAATAAGTTGAAC
AATGTATGAAATAATGTGTGCGGCAGCATTAACCAAAATAGAACACCAGAGAGCTGGGTA
GGAAGTTACCGCAAACTTATGCATTCCACGAACTCCATCACTCAGCTCAAGTACTAATCC
ATAGGCCCTTATTTGGTAAACCTTTGCAGTAACTACGTCGCCCAGCTTTATAGAACCTGA
GCGGAAGTTCTTGGGACTGGAATGCTTCAGGGTGTTGCTTATTTCCTGTTCTGCAATGGC
TTCATGTTCTGGAACGGCATCGAGTTCATTACTTGCAGAATCATCAGCCTTCGCTTTCTT
GTTTTTCTTGACAATTGACGTAGTTGATGCTTTCTTAGGGCTAGCTTTCCTAGCCTCCTG
AAGTTCTTTGGTTGGTTTAGATACTCTGGGGGATGGCTTTGCAACCTTAGAACTTGCCGC
CTTTGAACGTTTCTTTGTAGGACCATTTGCAACATCTTGAGCATCACAGTCAGCAGCACT
GCGAATTATAACTGCAGGAGTAGAAAATGCAGGTGTCTCCTCAGTTGTGTTATCTCCCTC
TATGCTATTGGATGACTTGACATCAGCATCCTTGCTGGGCATGTTCTCAACGGCGGCCCA
ACCAACAAGGTCTTGACTTGGCAAAAAAGTAGCATCCTCACTTGCTAACTCCTTTGCAGG
CCGATGGGGATGGTTTGCTTTGAGTGAAAGTTTAATATTACCCCTCACGTCCTGTCCAAT
GCATGTCAATGAGAGCGCTTGGCCAACAGATATAATATCCGAGACTTTTGAAACCTGAAG
GAAGAAAGGAAATAAAACAAAAACAAATAATAGTTAGAACTAATTAAAAGCTGATTTGCC
AGTATTTAGAATACAATGGAGAACTTATAAATCGGTGTAAAAGGTAACAAAAACTCTGGT
TCGTGGTTTTTTATGGCACAGTATCATTGCTCCTTATTTATTACTCCCTCTGTCCCAAAA
TAAATGACGCAGATTTAGTACTAAATTAGTACAAATTTTGTACTAGATCAACGACACTTA
TTTTGGGACGGAGGGGGTATAATTATATAGCAAGTCAAGGCAGTAAAGGAGGGGGCACCT
CAAGCACCACTTTCATTCGAAAGGAGAGAGCAAAGACAAATCTCTACTAATAAAAAGAAA
AGGCAGGAGTCTAAACTAGGATTGGTGGTGGACCAACCCAATATGTTCCTCAAACCAAGC
AAGAAAGGCTTGAACCAAAGAGACCGACCCAATCCTTCAACCAAATATCCTCTTCAGGAT
ACAAACAATATCGGCAAACACTTCTCAACATGAGCAGCGCATATCCAAAAATATTCATGC
AGAGCTACAATTTTACTCCCTCCGTTCAGAAGTGTAAGATGTTTTCGTTATTCCAATATA
GACTACATACGGACTGATATAAGTGGGAAAAAACATCACTAAAACGTGTCTATATACATC
CGATTCAGAAAAAAGTTAGAACATCTTATATTTGTAAACGGAGGGAGTATATTCTGAAGC
AATGACACTGAATTATTCAAGCGAAGTACGAAAAATCGAGATAGTCAGTTCTATCAACCT
TCTACAAAAATTTCATGATAAAAAATGGTCCATGAAATAACTCAGAAATGTGAAGCAGAA
TTTCAAGAGAAATACCGGTTCATGTGATAGCTCAGAAATGTGAAGAAGACCTTGCTGTCC
ACCATTGAAATCCACAAAAGCGCCATACTCCTTTATTGAGGAAACAATTCCTTTGTATGT
CTTGCCAACTTCAATTTCACGACCCACAAGAAATTCAACCTGCAAAGGAACAGGTTAGAC
TTTCTCATGTAAAATTTCTTCCTCCCAAACACTTGCAAGGAAGGATGTTTGGTTGGGATT
TTACTTGGCTTTTTCACTTTGGCTTTGTTGGGGTGCTTTTTGGCTTATAAGCCAAAGTGA
AAAAGGCAAGTAAAAGCCCAACCAACCATATCTAGCTTAATCAACCTGCCATTAACTGAT
ACATACCTTCTCAATAGCCTTATCCATAATTGGCTGAGTTTTAGCAACAATAGTGACTGT
ACCATCACTAACAGATACCCGTGCACCTTGAGAAAATGGAAATTAATTACAAAGTTAGCT
GCCTGAAAATCTTTTACAAAATACAGAGGGGATAGCTAAATGTAGTACATACATGGATTT
AAATATACAAGTTACGAAACAGAATGGTGACATTATGCCCATATTCAGTTTCTGTTAGAA
TAAGTCCATATTCAGTTAATCCTTAAGGGAACTTGAATTTCTGACTTTGGCTTATCACAG
ACATGCAGGTCTAGATCCAGACAGAGTGACAGCTAATAGCAAAAGAAAACGAGTAGAACA
CAGCCCAAAAGCAAGGCTGTAGAAACACAGCCCAAGAAGTACCAACATCAAAGAGCGTGG
TTTTATTTTTACACCCCTACTATCCACCTTGAGTTGGTACTAAAAAAATTGGGATTTTTT
TTTTAATTTCTACGCTATGCAGCATTCTACACTCCATGATGAATCCAATACATATTTAGC
TTGCTGTAAATCATTTCTATGCATGTTAATATTAGGCATTGACACAGGTCCATCAGGGTC
TAACCCGGGAGCTTCCAGGCAGATGATGTCGACGCCACCCCAAGCTACTTGACCATATAT
CAGGACTTGAAATGAATAAACCATTACGTGATGACAGAATCAAGATTGTATCGCCCATGT
TTTAGACATGAAAGTCACGTGCACTTGGGTTTTTTTATTAGGGTGTGAAATGTGGATGGG
CTATAGTGAAAGGATAAAAAATATGTGAATCTACAAGCACGAACTGACGTTGGATCTACA
GGTGGTATGCAGCAACATATGTTCCCATCATCAAATGCAACAATTTGTATCAGTATTTTA
TTCTTATTATTAGTTCAGGTTCTGCAACCATAAAGAAAATCTTCATCAAATTTTGAAGAA
TGCAACCCTGCAACCCTGCAATACTCAGCTGGGATTAGTCTTTGTCTTTACAAATATCCA
AAAGTATTCATTCCATTTCATCTAGGCAAAGTGGATGATGGTATATTTCTTAGTGTTGCC
TTGAAATAATCAATTCAGTTTTTTTACAATGAAAAAGGAGAGTGCAAACAGGATCCAAAA
TAACTTGCCAAAAACTGAAACACATGTTATCAATCATCAAAATAATTTGTGGCACATCAG
ACAATTACAAAATTCCAGAAACAGGTACTCCCCCCATCCCAAAAAAAATTGTGGGATGAG
GGAGTAACATTTAACCCTCACATCAAATGTGACATGAATAATGTCTTAAAGAAGAGCTTA
AGAAACGACATGAACAAAAATCAGGTAGAAGCTAGCCTTATACCTGTATCTTGCTCAATT
TTTTTCCTGTGGAAAAGTAATTTCCTAAGAGAATTGCTGCTGAAGCTCAGCGTGGCTGCA
AATGGAGAGGCAATTGTGACATCAACAAATCAACCTAACCTAAAAGGGAACAGTGAAAGT
GCATTAACAAACCTAATCGAGGAGAACTTCCATCATTGATAGCACGAGCAGTACTTATTT
CCTGATCCATGCGGTCAAGGATTTGATTACGAGCCTTTCGTGCAGGCTCCAAACTTTCAC
ATACTATGTCCAATGGTATTCCTGCAGGTTTTATATCCAGCTGAATAGCAGTAATACCCC
TCCTTGTTCCTGCAATTTTGAAGTCCATGTCACCCAGGTGATCCTCAAGACCCTGAGTAC
ATCAATGGCCATGATTAGTTCAGTATGGACTTTTTTGCTCTAGCAACATATACAGTTAGT
CAATTAGACATAAAAGTAGGAAATTTCTCTCAAAAATCTGACAAGGAAAATGAAGAGTGT
CTAAGCTTACTAGAATATCCGTCAATATACGGTAACTAGAAATATCTCCAGTAGTTGGGT
CTGCTTCACTGACAAGACCCACTGAAACACCAGCAACATGCTCCCTTACCGGTATCCCAG
CATCCATTAAAGCCATGCTTCCTGTCAATCACCATTTCAAAATGCATGAACAGCAGAATT
TGTAATAAAAATAAATAAATAAAAATCTGAGCAGTTCAAGCCTTCAAGGACATCACATTG
ATGCTGGAAAGGCATTTTTATACCCAGATTAATAGATGAACCCTAGAAACCAATTAAACT
CAATACAAGATAAAAGTTATTTCAGAGGTTTCTTGGAAGTGTTACACTTGCTAATCATTT
ATGATATTTCTGCATTATAGACATGATAAAGGCAATTGTGAATGCCTATCCTATCATAGC
TTAGTTACAGAGCGAAGTATAGACCCTTGATCCATTTTTACATCAAAGTGCAGGACATAA
TCTTGCAAAACTAGCGCGTTTGCAAATGAATGGCATTCTGTCACCAAATTACGGATGAAG
GTCAATCAGATAAAATGGCATTTAGTTCAATAAAATACCATCTCCGAGAGTTTCATTTTA
TGCATAATAATAGTAACACTAGAAGAAATGAAGATGCGTACCTCCACATACTGATGCCAT
TGATGTTGAACCATCAGAAGCCATGACTTCTGAATTTACCCGAACAGTATATGGAAAGTC
ACCTTCTGGAGGAAGCACAGCAAGTAGTGCTTTCTCGGCAAGAGTGCCTGCACAATAGTA
CAAAACAAAATAACCAAATTGGTGTTATTCATTTTCCCTTATAAAACTATCAACACAAAC
TAAGGCTGAAATTAGAAAAGCTGAACAGAAGGAGAAAAACAAAGGAAAACACAATCACGG
ATCTAGAACCTAAATATTGCAACAGATGCCAATCAGCATATTGTAGAAACCCAAGTATGC
ACACAGCAAACCAAAAGCCTACGCTTTGAACCACAGTTTGCAGAAGTTCCCTAGGCTATG
TATTCTTTAAAACATGGTACTACACATATCTATTTAGAGTACACTTCGGGACAAATAAAT
TCTTTAAACTGCAGCACTGCACCAACAAGGAAAAATATGTACCATGTCCAACTTCACGCC
GATTCAAACCCCCACGTTTGGCAACTTCGTTTATTGAAAATGGTGGAAAACTATAATGAA
GCATGAAACGCTTTGTTGGTGGGCCAACAATTGAATCCAATCGCTGAGCATCACCAGGAG
CACCAAGGGTAACTGTACATAAAACCTACAAGCGAAATTCGAATTATTCATGTGCCGTAT
ACATATAATAACTTGATTTGAATACATTATAAAGGTCCTTCAGATTTAAACAGATGTCAT
TTTCTGTGTGTGTGTGTGGGTG