Contig Data
morexGenes
Links



Map Locations of contig_97434 (5043 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_97434

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81650 1 917 bp MLOC_81650.1 Available Available None
MLOC_81651 1 540 bp MLOC_81651.1 Available Available None
MLOC_81649 3 1453 bp MLOC_81649.3 Available Available LOC_Os06g34730.1, FRAME:+1, EVALUE:2e-23, 13106.m03586 protein expressed protein





CDS Structure of MLOC_81650






CDS Structure of MLOC_81651






CDS Structure of MLOC_81649






Contig Sequence (5043 bp)

>contig_97434 5043 assembly3_WGSMorex_rbca.fasta
CCTAGCCGTCGCCTGAGCATTATGGACATCAAGTTTTTTTACCTTCCAGTTTTTTCAAGG
GCTTCGTAAATGTTTGCCCCCTTGGATAGATGCCATTCGCAAAATAGTAGCCATAATTGT
ATGTACGGACATTTGCTACAAACTGCATCGATGGCAGTTCACCGTTTGTAATACTATCCA
TGAGTGGTGACCACTGAACAACATTGATGTCGTTCAAAGATCCTGGCATTCCGAAAAAAG
CATGCCAAATCCAAGTCTCCTGATCGGCCACCGCTTCAAGGATTATAGTACCACTTTTTT
TCTGGCCACCGCTTCAAGGATTATAGTACCACTTTTTTTCCAACTCTAGTGCATACAATC
TATTGAGCCAAGCATACCTGGGAACCCGCGAGCTTTATTCATCTCCAAAAGCCTTGCGGT
ATCGTCGGCATTGGGAGCTCTCAAATATTTCGGACCAAACACTTTCACGATTCCAACCAC
GAAGTGCTTGACACACATGATGGCTTAACTCTCACCCATGACCAAGTGATCATCAACTAG
ATCCGTCGGAATACCATATGCCAACATACTCAACGCAACGGTCACCTTTTGAAAGGTGTA
ATGCCCAAGTTCTCCGGCAGCATTCCTCCTTTGCTGAAAAACTCGATCATGGCTCAACAG
TTTATCTGCATTATGTTTGAACAACTCGATGTTCATCCTATAACGGCGCCGAAAGTATGA
CTCGGAGTATGTGGGAATTTCCAAAAAATATTTCCTTATCAATCTGTTGTGGGTATCGAC
CCTATCCCTCCATAATTTCTGACGATGAAAAACCGAACCACCATGCTTTTGGCTTTTGTT
GATGTGCATAGCTAGGACCATTGCTAGGTCCTCCTCCTCTTGAAGATCAAATTCTTCATC
AGAAGAATCATGGGACGAACTCATCTATAAATATGAATTCAAACTAAAATTTAACACTCC
AAACGTCTACAAAATCATCTACAAAAATGAAGTTTAGTAGCAATATATATCTTGCAAACG
TTTTGTAAAATACCTCGTGGGCGCCGAGCTGCAAACCCCTGGTGGGCGTTGTCCGTCGGT
GAAACGGTGCGCTCCAGGAGCGGCCGCGATGGAGGAAGCAACGGCGGACACCGGGGAAGA
GGGGGAAGCGGCGCGCGCGGTGAGGAACGGCAGGTGGAAGCGCCAACGGGTCGCCGGAGA
GGATAGGGAAGTCGCGCGCGCGAGCGAAGCTTTCAGATTCAACGGTTGGTGGGCATTCGC
GTGGGCGAGTCGCTGAGCGGTATGTTCGACGCGCAGAGTAGTTTTTAGCACGCACGTGAT
TTTAACGCATCTGCTTGAGTTGTCAATTCAGTCGCGCGCGTGCTAAAAGTCGTTTGTTCA
TGCGTGCCGTTTATTTAGTGCGTTTGTTAAAGATGCTCACAGTGGCATCATTACTATTCC
CGTTCAAAAACTGGTCCTGCCTTGGAAAGTGTTGAGAGGTGCCACAAAATAAAATTGTCT
TGGTAAAGCTAGAAAGCAACCTAGGAAAAGCGACGTTTGGGGTTCATGGAGTCTCAAGTC
AGTTGCACATGGGGAACAAGTGTGCAGCAATAATACACGCGACATGCACACTACGTACTA
CCATTCCCTCAAGTCGGCCCCTTCGTTGCCGCGTCCGATACTATATATAACTCCACGATC
CCTCCCACCATTAGCAACCACAATGATCAACGCAGCATAAGGAAAAACTCCGTGCGGCAG
CTCATAATGGATCGCCAGAGCTTGCGAGTCGGTGGCGCCGGCGACGCGCAGGAGTTATGC
TACGTCGGCAGCCGGCAGGCCGAGGTCGACGGCGGGGCCTTCCTGATGGAGCTGCTGGAG
GACACAACGGCGCCGGAGGCCGCCGACGACCGGCTGAGACGCGTCATGCGGTCCCTCGAG
GCCGAGCTCGGCATCGCGTCGGCGCCGGCGCCGGCTGCGGCGGAGGACGGCGAGAGCACG
GCGGACGGGCCGATGAGCGACGACGACGACGGGGGGCTGGAGGACATGCTGTCGGAGCTG
GAAGGTAGCCTTGGGGGCGAGGCGCCGTCGTTGGCCACCGTGCTGCCGTTGGAGTATTGG
GAGGAGGTGGCGCCGGTGATGGGCGGCGACATGGGCGGCTGGTACGTCGACGGCGAGGGG
CTCGTTGCTGGGTACGAGTACAGGGAGCCATGCTGTTACAATAATTACGCATATGGTGAG
GGGTCCGCCGTTGAGCAGGTGTACAGCCCCCTGTGCTTGTGGGAGTGATTCGTTACTAGT
ATTGCACTTCCTGCGTTTCAAAATAAGTATCATAAAATTTATATTAAATTGATATAAATT
TTATACTGAATCAACAATATTTACTTTGAAACAAAGGTAATATTTTACCCTTCGTTCTAA
AATAATTGTCTTTATACTAGCTCTAGTACAAAATTGTACTCCCTCTGTCCCAAAANNNNN
NNNNNAACTTTGTACTAACTCTAGTACAAATTTGTATTAAGTTTAAGACACTTATTTTGG
AACGGAGGGAGTACTAAACATGAAACACTTATTTTAAGATAGATGGAATACCTTCCAAAC
GTTTGGGATCCGAGGACATCCTACGGAACGGCGCCGCGGGTGGAGGAACAAGGGCGGGTG
GGAGGAGGAGGACGACGAACGGGTGAGGAATACGGTGGTGTCAGGCTGTTTTTTTGGAAG
AGTCATAATAGCAATTACATATAGGAGTCTATATAAAGCATGGCAAAGATCAAAATTGTT
GTACTACGAAAAATAGATTTGTATAGTTGTATGCCTTGTCAGAACCGTAGGCATACTAAC
AGCTGAAGAGGTAAAAACTGTAAGTCTCGACTGAGGGCTGCTAATTAAAAACGCAATGAA
GCGCGATTTCATAGGCAACAGTTTAATTCCTGCATCTGAAAAATCTCGTGTTAAACGAAT
CCACTACAGTACAACATGGAAAGGGGTAAAAAAATACGGGTCAGATGAGTATGCGGACTC
TCTTCTGACCGAAAAATTGGGCTGAACCCGCATACTCGTCGAAATTTTACTGGTCTGCGT
GTTTTACATGATATGCTAGAGTTGCTCTAAGCATGCGGACCTAGAAACAAGCCTTATAGA
AGTGTTGGGTCAGTAATTCTTGCATACAGGAAACACACAACAGAAGCGCTCGGCGATCTT
GTGGACAGTGCCTCCTACCTCTTCCTTCCTCACAAAAAAGGGGGGGAAATCTGATTTTTC
ACCCCATGTGCACTGCTACTCGCATGCCTAGCCAAATAACAATGCTATCGTTGCCACATC
AGAGATTAACCGAGCACAACTCTGAACATTTCGATGCTATTGTCAGATTTATCAAACCAG
CTTGCTGCCACTATAGTGGAGACAATCTGTGCTGTAATATACTCCCTCCGTCCAATATTA
AGTGTCAGTCAGAAAGCGGATGTATCTAGCTCACTTAATATGGTACGGAGGAAGTAGGTT
TGAGATGCCACTGTCATCAGCTCAGCTTCAACTATTCAGTGAAATAGTACTCCCTCTATA
CCACAATACTTGTTGGAGAGAACTAGTCTAGTTCTCCACAACAACAAATATTTAGGAACA
GAGGAAGTATCTGTCACAAAAAAACGAACCCCAATTTCATGGGAGAGAAGCAAGAAACTT
GTATACTTGCAACACCTAGAAGGAGAACAGCAAACATTCCATTACTTCTAGCTAAAACTT
CCACAGACCAACAGGTGAATAATAACAACCGAATGCCTAATCATACTCCGTTAGCTTCCA
ATACGCATAATAAGGTACAAATCGACTACCCACCACACAAAGACGGATGCAAAAGTAAAG
AGACGATGTGAACTGTTCTACACATATAAGATTAACCTGCCACCGCCCCAGTATATTATA
CTGTATTACTCCATGCTGGAACTGAACCAAAAAGGCATCTAAACAAAGCAAGCACTAGTA
ATGGACACTGGGACGCCCTTGGATGACGAAACATTGAGTTACACAGCTGGAATTATGTCG
TCTTCGCTACAGTCTACGATGCACGACGAAGTAGCAAAAGTTGCCAATGCGCTGTCGCTG
TTGAACATCAAACAACCAATACACATATCCAAGAGAGCTCTCCATCTTCACATCAGAACC
TGCCATAAAGATCCCAGTTTTCAGTACACAGATATACGGTAACATGATACTGGATAAAAA
TAACGAGTACAGCATGGTCTGATAGCAAGCCAAACCATACCCGGACAACATGGGTACTCG
TGATCTAAATTATCCTAAGCTAAATCTGAGTTGTGCTTACACTGCTACTTACTACATATG
ATCTAAATTATCCTAAGCTAAATCTGAGTTGTGCTTACACTGCTACTTACTACCTGCTCC
CTCCGTCCTAAAATTCTTATCTTAGGTTTGTTTAGAAATGGATGTATCAAAATACTAAAA
TGTGACTAGATACATTCACATCTTAGACAAATCTAAAACAAAAAATTTAGGATGGAGGGA
GTAGTACATACAAGATTTGGGCTCCAACCATGCCAAGGAAATAAGTGTGTATGTATAAAA
AAAACTGTGTGTGTGTTATACTATTCCAAATTTGATATTTCGCCCTGAGCTGGTCTCGGC
CCAAACTGAAATGTTATTAGGTTTTTACAAAACCATATAGCACCAAAAATGTGCTCAACC
AACCTAGAAAAAAACTGATGATTCCAAGTTGTGTGCAAGAATAATGGCAAATACCACCAA
ATAAATTAAGGTGAGCTAAGTGGGTTATTTTATTATTGATCCTATTAGTTTCACTAACCA
TTCTAGTAGTTTGTTAATTAAGTGATGTCATGTTACAAGGAAAAAAAATGCCCCCAACAG
TAGGTTAGCACTCTACTGGCTCAAAGATATTACATATGCATACACTGAAATTTTGAAAAG
AATAAAATAAACAAGAATTTCCCAACCATTAGAAAACAGGACAGTCTACTAACCACCATT
TGGATTCCTACATAATACAAGAAACTAGTTTATCTCCTAACCACAGTACACGAGCATAAG
AAA