morexGenes - Barley RNA-seq Database

Contig contig_97360

Source Contig contig_97360

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_97360 (2421 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_97360

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_81636	2	2211 bp	AK365681	Available	Available	None

CDS Structure of MLOC_81636

Contig Sequence (2421 bp)

>contig_97360 2421 assembly3_WGSMorex_rbca.fasta
GCCATGGCGTACCGGGCGAGCAGCCGCGAGAAGCGCCGCCTCCACGTCGTCTACAGGATC
GACATCGAAGCGGTCAGTCCCCGCTCCCCCTGCCCCTCATCTCCTCCATGCCTCTCTCGT
CTCCGCCGCCCATACCAATTTCTCCATCGCGTCGCATCCAACACCATCGCCATGATCAAT
CTGTCTCTCACTAGCAGTCAGCGCCACACACGCCAAACAAAACAACAACCAATTTCGCGT
TATATTAGTTGCCAAAATTCAGATGAACTCGAGTTAGGAAAGAATTCAAGATTCTGTAGC
ACTTCTTTGGGGGGATTGTATAATTCTCGTTCCCAGCTGATCGAATTTTGTGTGCAACGC
GCCAGCAGCGTTAGTGTAATCCGAGGTGCGCCATGGAATCTACTTCTCGTTCCCAGCCGG
CACAACTGTATCAAGCAACGCCACAGCTTGTGCAACGGGGGGATAGGAGGACCCAGCAAT
TTTCTGAATTCATAAACCCGTCGTCACTTATCAGACATCGACCTGAACCTGAATTAGTCT
ACTTGTGTCTGCTACCCAGTGCACACTAAATTAACCCAACTGGTAAGTGCTGCACCACAT
TAGCTGTGCCATCAAGCTTTTGATTTGATTACTGGAGTAGTTTGGTTGCTCCTGGCTAGC
CGACTCCGGGTGCTCCAAGGACAGAGAGGGAGTCAAATTCAAACAGCGCCAACCCTGCTC
AAAATCCGCACGAAAAACCCGGACGGAGACACGGTCCAACAACAGCTTGCGAGACGCAGT
TTCTCCGCACGTCGACGGTGCCATGGTCGACCCGTCAGGACGGTAGACGCCGACTTCTAG
AGATATCTGGATGGTCGCTGCAGCCATCCGTTGCTGTTGCACAATGGGCTAAGAATGACA
TCACAACCGCAACAAAAACTGGGATGCGTCACTGTCGCGCAGTGGCCTGATGAAGCTCCT
TTGCTTTCGTCGGAAAAACAGCTCGATCGATGGTTGTTTTGGCGTGATCTTCCTAGCTGA
AGAAGAATCTCTTCGACTTTGTCAAATCTTGTTTAGCTGTCGTGAAAGCGCACAAATGTT
ACAACTGTTTTATTACTGCCGCGATCCGCTAGTTCATATTCCTTTGTTTTGGGTGGTTAA
TTTTAACTCTGTTCGGTTTGTTCTTGTCTTGCAGGTGAGGCTAAAGGGAACCCACACGCC
CAAGTCGCTGAAGCAATGCATTGTATGACACCCGATCCATCCTCTACACGGATGGAAACG
GGCTCCGAAGAGGCGGCGCGACTCTCTCTCTCTCTCTCTCTCTCTGCTTCCTCCTCAGGT
CCCAAATTTTGGCTCGAGCAGTAGTAGTAGCTTGTGTACACTCGGACACCACACGCCATG
TGTATATGTTCGCCCGCACCGACGTCTCTCCCTCCCTCCCAAGGGGACATAGTGTGGAGC
TCAGCTGTAAATATGGTGGAACATTTGTGCTTCGGCCTCCTGCAACATAGGATGAGCCGC
GCGGCAGATGCGATTGCTGTTTTGTCATCTACTCTTCTTCTACTCTCTGTTTTGGTTTCA
ATCAATGGACGTCACCGTACCGGACTGGAACTGTGAATCGTCAAACGAACGAATTTTGGC
GGACTGGTAAAATTGATCTGGACGCCGGGAACAAGTTTCAAACACGTTTTTCCTGCCGTG
GAAACTTCGGACCAACGGAGTCAAGTAATGACGCACGGGATAACAATTGGTAAAGTAACT
TGCGAGGAGCTTTCCGGTTGCCCAACGATCTAGACCTTGCTTGACAAAGGGGAAATGAAG
ACTTTGAAAAAACAAATGAGAAAAGAAGAGGTCTTTGATTTGTTGCTTCGGGAAATCTGG
GATACTTTTCAGCCTCGGAAAGGCCAGCGTATCACGAGCAGATTGCTGCTAAAATGATCT
GGATAACGTTCATTTTCTTTAGGGAACCGATCTGGATGATGTGCTCCTCGGGGGCATTAG
AGTATAGCTAATTGTCCGTCTTTGCAACTGAGGCAAACATATTTTACTAACTAGACGAGC
AACGCGGCGGCGAGAACCTTGTTAAAAAATGTATGGATAAGTGATAGAAAATTAAAATTA
ATGTAAAAACAAATATAAATTTTTCTTACATGACTTAATTTTCTGAAAAAAATAAGGCAT
GAGTGTTAGACTTATAGTTATGTCTATATACATATTGTAACTCTTGTATAATTGTAACTC
TACCCTTTGAGGTACCTCTTATATATATGTTGTCGTTGTCCATCCAAGAGGTGTCGAAGC
CCAAAACACCCAAAATACTTAATCTACATACATAATGCTTCGAGAGTTGGGAGTATCTCA
GGATCGTCCACCTGTTCTTTGGTGTGACTAGCAAAAGGGCCCGTGCGTTGCAACAGGAGA
AAAAAAATACCACACGCTTTT