| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_97250
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_81614 |
1 |
3443 bp |
MLOC_81614.1 |
Available |
Available |
LOC_Os01g33110.1, FRAME:+3, EVALUE:0.0, 13101.m03343 protein receptor-like protein kinase 5 precursor, putative, expressed |
| MLOC_81613 |
4 |
1924 bp |
MLOC_81613.2 |
Available |
Available |
LOC_Os09g37000.1, FRAME:+3, EVALUE:0.0, 13109.m03660 protein 26S proteasome non-ATPase regulatory subunit 3, putative, expressed |
CDS Structure of MLOC_81614
CDS Structure of MLOC_81613
Contig Sequence (9701 bp)
>contig_97250 9701 assembly3_WGSMorex_rbca.fasta
TCCATCCGGCGCCTGGCCACCGCAGCTGACTCAGAGAGGATGGAGTTGGGGATGGCCAGC
TGCTCCGGCCATAGATCGACCACCACCGCCAGCTCCTTCTCCGGCTCCCGCGACGCCCCC
TCCCCCGGTGTCTGTGGCTCCTCCTCGGGCTCCTCCCCCACCCCCCTCCTCGAAATCCAC
CTCCGGTTCTAGAGGTAACCCCACTTTCCTTCAGATTCGGACATGCTAAAGGAGGAAGAA
ACGATGCTGGATCGTGTAATGCCGGTGGCGTGGTGGCATGGCTGACTCACTCGGAGAGGG
AAGTGCTCGAGTGGCGGCAGAGAGAGGAAGGACGCGAATGTGCTAGGGCTGGGGGCGCCG
GGCCTCGACCGTGGAACAGCGGCACGCGACGCGTTCACACACCGCGTCGCGACAGTCGAG
GCGCCCGTCGGACCGTCGGGTCGCCCGGGCCCGGTGGTCGCACGATGGCTCGCCGGCTTG
CGGATGCCGCTCATATAGTGCGACGACTGCCTAGAAATAGTGTTGCGGCTCACATCCAAC
ACACGGCAACACCTCAGATGGGTATTTTTCAAATGCAAAAACGACAGGGTATGATCTTCT
TTCTCTATGGCTTTGTCAACTTATTTGATTAAATTATGGTAGCTTATTGAGGTCTTCATC
TGTGTAGGAAGGTGGATGCTCATTTTGGTATTGGGAAGAAGAGTACATCGATCTATTGAT
AGAAAGAAACTTAATAGATGTTCGTGCACTCCTTAGTATAATTGAGTCTAACGATTCAGC
CGCATATGCAATTACAAAAGAAATTAAAGGGGAAGCAACGTCTAATTCTGTAGAATCAAA
GCCAAAGAGTGAAAATGCAATTTGAAGGACCCCAGATCAACAATGAATGCATGGAGAAGT
TGGATATCTTCTAAAATGTCTAATTGTGGTTCTTGTTTTCTATGGTCTTGCTGTTTTAGC
AAAGATTTGGTGAATTATGATGTATCCAATGCCTTTGAAGAAAATAAAGAAGCAACTAAA
AATGTGTTTTCATGCGTGAAAATGTAACGGAAATAAAACGCTTTTGCGGGTCGGCTTGGG
CGACAGTCGAGCGGACCCCGCAAAAGCCCGCAAATGCGTTTTTTCGCGACCTGCAAACGA
TTTTTGTGGGGCGGCTTTATACGGGGTCTGTTAGAGATGCTCTAAGGCCCCACATGGACA
TCAATGTCCTTAGAACTATCGGTGCAGTCTCGGTCTTATTTGGGCAAACAAATTCTCACT
CGGATGCTCAAGGTCACTCGGACCACCTTCGGTCAATCGGACGTGCCCCTACATTCGGAC
TAAAGCAAGGTGAAGACGATGAAGAGACTGCAACAACAACATACTTAAACTATCACATAA
AGTACAGTGAAGACTGACGTTACTAGTAACGCGAGCCTTAGAGCTGGCGTTACTAGTAAC
TTCCGTGGTTATTACCATTAACTCATCCTTGTAATGACGCCCGACCGGTCGTGGCGCACT
CTATATAAGCCACATTCGAACTTCTGGACGATGGTTGAGCATTCTGTATTCTCACACCCC
CCATAAGCCATCACCAGCCTCCGGGCTCGAGACGTAGGGTCTTTACCACTCCCGAATGAG
ACCCAAACTCGTACATCCGAGTGTAACCACTGCGTCGTAGGTGGGCCTTGCCCCTCGTTT
GCACCCCTGTTATTATTGTCAGGTCCATTCCTACGACAGTTGTATTAAGAGTGGATGAAA
ATAATTGTATAACATCACACGAAATCAAAATAATTGTATCAAAAGACTTGAGGGATGAAA
ATTGTGTGTTCAAATAGAGTCGGATGAATCCCAAGGAAAAATTCCCAACATTTCAATCCT
ACGAATCAAATGACCAACATAGGAAAAAAGTACGGAAAATCCAAATCCTCATAAAAAATC
TTATGAAATTGGTTTTGAACCAAACGACCCCTCACGATTTGTTTATTTAGACTTGTGGCC
CTATTATTTTCTCGTTGGCGTCATCACCAGATTCATAATAAATTTTCTAATTCCACCCCT
CTCATCCGGCCTTCCTTTCACTCCCCCCCTCTCTCGCGCCGCACGCACTCCTCCCCCTCG
ACCTCGTCGCCGACGCCGCGATGCCGGAGGACGTTGAGATGAACGACTCCGCTCAGCCCG
CCCCCGCCGCCGCTCCCGCGGCCGCCGACGCGCCCGCGCCCGCGCCCGCTCTCTCCACCC
TGCAGCGTGAGTAGCCCGGCCATCTCGCCTCCCAGTCCCCGTCCCCCAAAACCCTAGCCC
AGCTTCCGGCGCCGTGGGCGCTCAGCAGGCGGTAGCTCACGTGTCTTTGCATCGCCGTGC
CTGCAGATCTGAAGGAGATCGCGTCCGTGGTCGAGGCGGGGTCGCTGACCAAGGAGGTCC
GCCGGATCTCCCGCGCCATCCGCCTCACCGTCGCCCTCCGCCGCCGCCTCGCCGCCCCAG
ACGTCGCGGCCTTCCTCGCCTTCGCGCTGCCCCCTTCCTCCGAGGCCTTCACCCGCCTCT
CTCCGCTCCTCCCCAAGGTATTTTTCTGCCTGCAACTTATGTGCTTTGTGATTTGGAATA
AACAAGCAATTATGCCTGAATCCGAGACAGCGCGAAGGACTTGTGCATCAAGTGCTATGT
TCGTTAATCTGCATGTGTCTTGGCTGCCGAATGACATGGTAGATATTTCTGGATTGGTTG
GCCTTTTAGAAGTAAAAAATTAGAACTGGTAATGTAGGCCATTCTACTAGAGTAACTGTT
GGTCGGCTACTGTATTGTGATGCAATGAAAGCCTTTAGATATTCCAATTGAGTTTCATTG
TGAAGTTCATGACGAAGGAGGTTTCTTCTGTTCTGACGATTAATTGGTAATTGACAGTCT
TGGGTATCTCGTGTTATGTCTGACATGTGATCGTTCTGGATGGCTTGGCTTATTAGAAGT
AAATCAGAGCTCACAATCTAGATCATTGCTGCAAAGCAACTGTTACTGTTTGAGCAATTG
CATATTTTGCAATCCGAGTTGCACTATCGAAGTTCATGTTGAACAAGGTTCCTTCTGTTC
TGATGCTTAATTGGTAATAACTGACAATCTAATGCTTGGTGCGTAGGGGGTTTAGAACTT
GCTTCGGTTTAATTCTGTACACATCAAATTTTTTAAACTGAAGTATTCTCTTGCTCTGAG
GTGTCTGACATGCATATGGTATCACCTCTTTTAGGAAGATGGAAGTGAGATGGATGTTGA
TGCTGCAGCTCCAGCAGCTCAAGTTTCAATCAAGCATGGACTCCCAGAGATTGAAATATA
CTGCTACCTGCTTGTGTTGATTTTCCTTATTGATCACAAGAAATATGATGAGGTACGTCC
GAGAATTTCCTCCACTTTGTCATCATTTGTGAAACATACTAAGTTGATGTTCTCTTCAGG
CTAAAGCATGTGCGAACTCTAGCATTGCTCGTTTGAAGAATCTCAACAGGAGGACTGTTG
ATGTTTTGGCTTCTAGGCTGTATTCGTATTACTCGTATGTCCATGAACTCACCAACAGCC
TTGCTGAAATTCGTGGGTGAGTCATTATATCATGAATTGTTATTCTCAGTACACGGTATC
TAAACAAACTTTCCATTGCGTCTCTCTGAGTAACTAGTAAGCTCTTTTTTCTGTTTGGTC
CTGCTTTCATTTGCTTCTCATACAATTATCTCTCTGCAGAACTCTCCTTGGGTTGCACAG
GATGGCAACTTTGCACCATGATGAGCTTGGGCAGGTTGTTCTGAGACCCTAGTTTTCAGT
TTCTTAGACATACAGCTTGAATGCTGTCAAATTATGGGGTTGACTTCTGGTTTCCATGGC
AGGAAACTCTTCTTAACCTGCTTCTTCGCAATTACCTGCACTACAACCTATATGACCAGG
CAGAAAAACTTAGGTCAAAGGCACCGCGTTTTGAAGCACATTCCAATCAGCAGGTAATCA
TCATTCATCAAGTATTTTATTTGCTCTCCTGTTTTTATACTGAGTTGTTACAGTTGAAGC
AGAAAAATGCCTTTGTCTTTGTACTAAGGTTGGTTATCGATTTAATGCTGAACAACCTAC
GAAATTGCCATTCTTTCATTTGATCATGTGAAGGTGTGTTGTAGACAAGAACTAATCTCT
ATTTTCCGCACAGTTCTGCCGCTATCTGTTCTACTTGGGAAAAATTAGAACAATTCAGCT
CGAATACACTGATGCTAAAGAGAGCCTCTTGCAAGCTGCACGGAAAGCACCCACTGCAGC
TCGTGGATTCCGCATCCAGTGCAACAAATGGGCTATACTAGTAAGGCTACTTTTAGGGGA
GATACCAGAGAGAACTGTTTTCATGCAGAAAGGAATGAAGGCGGCTTTGACACCATATTT
TGAGCTTACAAATGTAAGTTCATCTTCTTTGGAAAATATACATGTTACTGCTGCATGGTA
CATTCTTAACTGTTTTTCATGTATGGTCTCCAGGCTGTTCGCGTTGGGGACCTAGAAGTG
TTCAGAGTTGTTGCAGATAAATTTGGGAGCACTTTTAGTGCTGACAGGACATCCAATTTG
ATCGTGAGGCTGCGCCACAACGTCATCCGGACTGGATTGCGCAACATTAGCATTTCCTAC
TCACGGATCTCCCTTGCCGACATTGCCAAGAAACTGAGGCTAGATACTAAGACCGCTGTT
GCTGATGCTGAGAGCATTGTAGCCAAGGCCATTAGAGATGGGGCAGTTGATGCCACCATC
GATCATGCCAATGGTTGGGTGGTGTCGAAAGAGACTGGCGACGTGTACTCAACAAACGAG
CCACAGGCTGCTTTCAACTCCAGGATTGCATTCTGCCTGAACATGCACAATGAGGCCGTC
AAGGCTCTGAGGTTCCCCCCGAATTCTCACAAGGAAAAGGAGAGTGCCGAGAAGAGGCGA
GAGAGGCTCCAGCAGGAGGAAGAACTCGCGAAGCACATGGCCGAGGAGGATGACGATGAC
TTCTAGGTTGGTTATCCTCTCTTGGTGCTTTCAGCTGCTGCATGTTCCATTACGGAGAAG
CGAGGACTACAAAGTTGATGTTAGGAGCCACACTCCGATTTCGTTGAGGGACAATTTAAA
TGATGCTATTACTCTGTGGTTTTCTATGCTCCCAACAATTCTTTTATCACTACAAATTGC
GTAGAAACCTTATTTTTCCCTGAGATACTGTAATTGAGGAACCGTGTGCTGCGACGGGAC
ACTGTATTTGGCATCGCATCCTGTATTTGCTTTGCGGGAAGTTGATTTGAGGATAAGTTC
AGTGTGTCGTCATTTCTGCTGTGTGTGATTCATCATATTACAGTAGTGTAGCTTGTGTTC
ATAATCCGTCTCTACGTTAATGTTTTTGGGTGGCTGAAACTCTGTCACTATTAACGTCAG
AGAGAATTGTACCTTAGCAATGCCTCGGTCATCTTGCTGAGTTGCAGTCCATTGCTTTTC
ACTTGGCAAGAGGATGGATGAACATGTTTTTTTACCATTGCTGTTCGTCTTGTACCTTAG
CAATGCCTGTACAACTCACAATCCATATATCCTATGATGCACAATAGAAATAACAATTAT
TTGGTTTGAGGATGCTTGGACAGCCAAGTTTTATTCTGGACTAAACAAGCCTAAGATGGT
ACATCTGCAAGAATTTACATGTAAGTTCTTCAGACGACAAGATCTCGATAAGCTTTCAGC
ATAGTTGGCCTTTCTTTGGGTGAAGGAAGTAGGCACTCAAATGCCACAGAGATACACCGT
CTCACGTCTAAAGCCTCATCAGTTTCGTCTTGTGGTTGCGGAAGTCGTTTGTCCAAAATT
TCTTCAGGGAGAAAGTGGTCCTTGAGTGAAGAATGGAATTCATGCATATACCCAGGATGT
TTCCCCATTAACACCTCAAGCGCCACAACACCAAAGCTATATACGTCACATTTTTCCGTA
ACTTGCGATGTGTAGGAAAATTCTGCATCCAAAGAATATCATGATTAGTAGCATGCATTG
CTGTAGAACGTTCCATCTAACATAGTTTACTAGAGAATCGGAATATTGTGCTATATAAAC
ATACCAGGTGCTATGTAGCCATAGGTCCCCGCTAGTGCACTCCAATTCGACGAATCAGGT
TTTAACATTCTCGCAATACCGAAGTCCGAGACGAATGCTTTGTAATCAGCATCTAGTAAG
ATGTTTCTGCTTGTGATGTCTCGATGAATTATGGGCGGGTGAACATCATGATGGAGGTAA
GTGAGGGCTTGAGCCACATCTCTTATGAGAGCCGTCCTTCTTTGCCAATGGAACTGGATT
GCTAGTTCTTCATTGCTTAGGATAGAAGCTAGATTTCCTTTCTCTATAAACTGACATACA
AGGAACCTGTACCGCGGATGAGAACAATATCCATACAACTTGACGATGTTGCGTTGGCGA
ATTTTTGTTAACATTTCAATCTCATGCTGGAACCTTTCTTCATCATCTGCATCTTCATCA
GCTGCATGTAGTTTCTTTACTGCAACCACTTCTTTACTCTGAAGTTCTGCTTTATAAACA
CTGCCGTATGATCCCTCTCCAATGCAATGTTTCTCATCAAAATTGTCAGTTGCATTGATA
ATATCCTCAAACGCCATTCTGCCATCAAAGCTCCATACAGAGAATACATCCCTTTTGCTC
ACATCATCAGTTCTTTGAGATACTTTCTTGCGGCAAATCAAAAAGCCAATTGCACATGCT
ACTACTACTGAAATAGCAGCAGCAAAGATAGGAAGACCGATTGACAGTATAATCTTCTGA
CGCTTTCTCCTGTGATCTGCAAGGGGCAAATTACAAGGAGAGATGCCAACAAGGTCTCCA
CAAAGATCTTTGTTGTGGAGAAACCATTCTGCTGATGCATTGTGAATCCCTTTTGGGATA
GACCCTTCTAGGAAGTTGTATGATACATCAAATATTGTTAGGCTTTGCATGCTTGCAACC
GAAACAGGGATGGCACCACTGAATTGATTGTGTGAGAAGTTTACAAACATCAATACCTCT
AGTTTCCCGAGTTCCTGTGGTATTGGTCCACTGAGACTATTCATACTAAGATCAAGCATT
CTTTGCAGGGAAGCTAAATTGCCCAAACTACCAGGAAGACTTCCATTAAGGCTGTTGTTA
TACATATGCAATGATTGCAGTTTCAAACAATTTCCAATCTCCTCTGGTACTTTACCACTT
AACAGGTTGCTTGAGAAATGAAGAATCTCAAGATTACTAAGTCGTCCGATTTGCTTAGGG
ATCTGGCCAGATAGTTTGTTGTTTCTTAAATCCATCCAGTACAGATTCGTTATGTTGCCA
ATTTCCGGTGGTATCTCACTGGTGAACCTATTGAAACTCAGTATGAGCCTTCTAAGATTT
TTTAGCATCCCCAACTCAGAAGGTATACTACCTTCTATCATGTTGTCTGCGAAATTAATA
CCTGATAAGTTTTTACATGAGCCCCAGTTTGGCGAGAGCCGGCCTTTAAATCTGTTTGAA
GACAAATTAATGTCACTCAGATGTGGATACACCCCAAATGCTTCAGATATGTCTCCCTCA
ATCTGATTTTTGCTGATTCCGAAATATATTAGCGAATTGCAATCCCTCAAACCTTTTGGG
ACAGGCCCGTAAAACTTGTTGCGAAAAAGTTGAAAAACCTGAAGCTTTTTACTGTGGCAC
AAGTCTGGCAAGTGTCCGGTCAGCTGGTTGTCAGACAGTTGAATGACGACCAAATTGGTA
AGGTTGGAGAGTCCCGAAGGCAAAGGGCCAGACAACTCATTATTGAATAGTCGTATCTCT
ATCACGCTCTCCAATTTCCCAAAACTTTGATGGATTGGTCCAGACAATTTGTTTTGGTAG
GATATAAGATATTCCAAATTTGCCAAATTTCCAAACTCAGACGGCAATTCACCAGAGAGA
CTATTGTTATTTATCGCTATTTGTTTTAGTGAAAACATGTTCCCAATGCTTGGTGGCACT
GATCCAACAATGAGATTGTCCGAGAGTAGGAGTGCCTCCAGATTCACAAGGTTTCCGAAC
TCATGAGGATCGATCCAGTTATGTGGTTATCCCAAAGAGCTAAGTAGGTGAGTGAAGTAA
GATTTCCGGCAACACCAGAAGGAACTGAGCCGGTTAAACGATTCACCGACAAATCCAACC
CAATCAAGTTGGAGAGCATCCCAAACTCTACCGGGACCGGACCAGCGAGCTGGTTCAGAT
ATGCCGTGAGGTATCTGAGTTGTGTGAGGTTTCCAAAGGAGGGGGAAATTATGCCATTGA
GGTTGTTTTTTTCCAAGAGTAGTTCTTGCAGAGTCTGGACTTGTCCTAACTCTTTGGGTA
TGGGTCCTGACAAACGGTTGTCAGAAAGGACCAGAGAGTTGAGGTTGGTCAAGTTTGCAA
GGGCAGAAGGTATTTGGCCAGAAAGGATATTCGAGCCCAAATCCATCTCTACCATGTTCC
GAAGCCGTCCAAGGTGCCATGGGATGTTACCTGAGAGCCTATTCCCAGGGAGATAAAGAA
AGGCAAGTCTTGAGAGATTACCCAAGGCAGGAGGGATTTGGCCGGTGAGATTGTTGCTGG
AGAGGTCCATGTGCGTGAGCCTCCGGAGGTTGCTTAACGACGAGGGTATGTACCCCCATA
GCTGGTCACCCGAGAAGTTGAGCGTGGAAAGCATGGAAAGGGAGCCGATGCCATGAGGGA
TGGCACCGGTGAGGCCATTGTTGCCGCTGAGGTCGAGGTTGACGAGGTAAGGGAGCGACT
GGAATCTCAAGGCGTCCAGCCGCCCTGCAATGCCGGCGCCGCCAAGGGAAATTCCTCTGA
TGACCTTCACCGTGGTGGTTGTGTTTCCTCCTCCGTGCAGCCGGGTGTCGCCGCAGGTGA
TGCCGGTCCAGTTGCACGGGTACATGCCGTCGTCTCTCCATGTATCCAGCTGGTGCTTGG
AGTTGGAGGAGTACTTGACGGATGATTTCCAGTGGACAAGTGCCCCAGCTTGGGATCTCG
GCCCTCGGCTTGCGTGGCCGTGGAAGCAAGGAGAAGCAGCAGGGCAAACGAGAGAACCGG
GTGATGCAGCAGCGGCGGCGGGGACACCATGGAATTCGCCATCATCTCACCAGTCATGGC
GTGCCTATGATGATGTGCATACGATGCGCTCACCTAAGTTAGTTATAATAACCCATCAAA
ATACTCCCACAAGTCTCGGAGCAAGACGTACACTACACATGAGAAAAAGAAGAGAAGAAT
AGCGCACGGTACGTACCTCTGGTGCCGGGAGCAGAACGCGGCAGCCGTTGGTGCTCTGGT
TTTGGTGGACTGGTGCGTGAGCTGAGACGCGTGAGGTTTTGAAAGCACAGCAGCTTCTCA
ACTGCAGCGAAGACGGACAGACACCCACAAAGCAACAAAACCGCGTGCGTCCAACCGCCC
GCCCCCAAGGAAAAGGTGATCAGGAGGCCCCAGCGACGCCGGCCGCCACCGGTGCCTGCC
TCCTCACTTGCCCACTCCCGCGACGTGAGGAGTTGGGGACCACGGCGCTGCGACGCCGGT
TTGTAGTTAGGGTTGACCTAGTGTTTTCTTGTGACGTCGTTGGGGTGGTGGGAGCGACGT
CCGGACAAATAAATTTGTCTTAACTCTATTCCCACATTGGCGGCGACCTTCATGACGGCG
TCTCGGAGTTGATGTCAACGTGTGCTGCTCGGTCCTTCAGA
