| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_97165
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_81602 |
4 |
2131 bp |
MLOC_81602.2 |
Available |
Available |
LOC_Os02g09930.2, FRAME:+2, EVALUE:5e-19, 13102.m01096 protein CSLA1 - cellulose synthase-like family A; mannan synthase, expressed |
CDS Structure of MLOC_81602
Contig Sequence (3885 bp)
>contig_97165 3885 assembly3_WGSMorex_rbca.fasta
CCGGCGCTCGGCGCCGTTGTCGGACGTCTACAGCGACGCGGGAGAGTCTCGCAGCCGTCG
GATCATACATCGAGGGCTCCAGGAGTAACGGGCACACGCAAACCGGTACGGGCGACTGAA
GGGCGTAGGATCAAGGATCAACGGCTTTGTCGCTTGGCGCCATCGTTTGAATTCGAACAC
CGCTGCCATCGTCATCGTTGGGTCCTGACATCTGTCGCCTCGCGCAGTGGATCCTGGCCG
GCAACCGGCCGCAACGTGCCTCCGCGGCAAATCCGGGGGGCCGACAACCACCACCATCCA
GCCCTGCCTCTAGCCAAAGCACCCCGAAGCCCCACCTTCGTGCCTGCCAGCGCGGCCTCA
TCTCCCTCCTCTTGACTCCCTCCACTCCAACCTCCTGCGCCGCCATGGCAGATCAAAAAG
GGTCGTCGTCTGCCCGCCCCTCCGACCATTCCGCGGCCTTCTCCAGGTCGCCGCCGCGCT
GGCCATCCCGAGCTCCCGCCGCGAGCAGCCAGACCGGCGCTAGATCCGGCCGCCATGGGT
CCCAGCGTGGCTGCAAAGCAATGGATCCGGTTGCTGCGGGCAACGTTGCCACCGGTCTTC
ATCGAGTCATGCGTCCAGAATCCTCCTCCCCATACTACCTCGATCTCGCCATGCCCCATC
GGCCAACCACACAACCCCCACACTGTCGGCTCCCACAAAAGCGTCCAGTTCGTCAGCGGC
GAGTGGTTCCTTTGTGCTGAGCGAGCGGTGCGTTCGTGCTCGGCATGCAGTGCGTTTGGA
TACTCAACCAGTGCAGTCGTTTCTTTAAGTTCACTGTTCTCTCCTCCACCACCTATGTTT
ATGCAGTCGAAGATGGGGAGCTCACCTCTCGTCTCCGGTGATGGCAGCTTCTCCCCACAC
CCATTCCTCGCAGGTCGCATCTCCCTGTGTGCGTTGTGGAGAACGCGTGCATGCAGCTCG
CAGTCATCTTGCATTTACTTTAACATTCTAGAAACAAGTGTCCTCACATGTGAAAATAGA
ATTTTGAGGTTCAGTTGGCAATGACAAACATGCAGTCCGCTCACTGATCTATGCTTCATT
TATGTTGTTTTTGGATTGAAGGAGACACGTATAAAACAAAAACGTTTGACCGCACCCATG
ATGAACTCCTCTCTTTGGTGTAGTTTGAAATGTTGCCTTTGTAAGAAAATGTATGTGTGT
GTTGAGAAATTTTGTATTGTGGTTGTTCATAAGCTCACTCTCTACCCCAGCCCCCGTGCA
GTTCAGTCAATGTGTCCATGCGGTGCAGAGTGCATCTTGGTGCAGCCCGTCGGCCGGATG
TGTCAACTGCGGACATGCGTGAAGTACTGCTCCCACGGTGGTGTAGTTTGGATTACCACT
TCAAAGTGGAGCAGGAAGTGAGCTCCTCCTTCTTTGCCTTCTTCGGCTTTAACGGTGATA
TTCAGTCTGCTCTCCCTATGGTTTTATTCGACAATGGTAACTTATAACAAATCTCGATGA
TTCCTTCTACCAGGAACTGTTAGTGTGTGGCACATTTCTGCAGTGAATGAAGCAGGGGGC
TGGAAGGACTGGACCACCGCGGAGGACATGGATCTGGCTATTCGGGCCAGCCTCAAGGGA
TGGAAGTTTGTCTACCTTGGCGATGTTCAAGTACATTGATCAATCATGCAAGCCATCAGA
TTCAGATAACACAGCGCACACCATGGATCTGGCGTCCTTAATTTTATTTTCTATCCTTTT
TTTGCTCAAATTTTTTATGTTATATCTTTGAGACAGGAATTTCATAGTAAAAATATTGGT
GGTAACCAGAACTTTGCCGTGTTTTTTAGGTTAAGAGTGAACTCCCGAGCACTTTCAAAG
CCTTCCGGTTTCAGCAGCACAGATGGTCTTGTGGTCCGGCGAACCTATTCACGAAGATGC
TGATGGAGATTGTGACAAATCTGCCACCCTGCGGTAGTCCCATGGCAGATCTCTCCAATG
CTCGCCATCCTGCTTCCCTCCCTGCATCGTCTGCTTGAGCCGGTGAGGCCAAAGAAGCCA
TAATATATGTGGTTGTCGTGCCAGTGCAGTTCGCTGGCGACACATGGTGAAGTGGACCTC
GTCGTGCGGTGCGGTTCACCTTTTTTCCTTTTTTCTGGATTTTGGATGAGCGATGCACCA
GGATCACGTGAGCAGTGCGCCGTGCACCCCTATGTGGTTCATCCAATGCCACCGCCGACG
AAAATGTAAAATTTTCTGTTTGGTAATTTGCGCTTCACTTTGTTATGTTCTGTAGTTTAT
TTTTTATATCTATGGCAATGTGTGCTTGTGCACTGAATGCATGCATATCAGCCACAAAAA
AGAGTGAAAGTTCCAATGAATATGGTCCATTTGTGTGAGTGTTGCTCTGTAAATGGATGT
CTATGTTTTGAAGCTTGCTTTGTTCTCTATTGTACTCCATCCGTTCCAAATATAAGTCTT
TCTACAGTTTCATTAATGAATTACATATGGATGTAGATAGACATACTTTAAAGTATTGAT
TCACTTATTTTGCTCCGTATGTAGACCTCTAGTGAAATCTCTTAAAAGANNNNTATTTAG
GAACAGAGGGAGTAGTTTGCTATAAACTTCTATGTGGTTTACTTGGTACACGAGCAAAAG
AATTCTCATGCAGCTCTCTTAACCGTTTGATGCAGTACGGTTTTTATATATGAAGCAGTG
CAGTCGTTATATATGAAGCAGTGCGGTCGGCCGTCTAATGATGTTCATCTAATGGAATAA
CTTGTTACGAAAACGGCAAAAAAAAACTATGGTTCACTTCTCGATAGTGTTGAGGTTCAC
TTACGTTCGACGTGAGGTGCGGTCCACTTCCTTGTCTGAAAAAAAGTCATGTTTGACGAA
AGAAACCGTGAAGTTATCTTGCCCTCGCATGCAGTGCGGTCTTCAGTCTGAAGCAGTGCG
TTTTTCCGTCTGATAGGGTTCAAGCATCGATTTTCTTGTCATGAAAAACGGAGTGTCCGC
ATTTCGGTAATTTCAAAACTCCTCTTAAACCGTAAGGAGTTAGAGAGAGTGTTGTACACA
AAAAATGTGTCTTATATCTTTCCAACGTCGTATCATTTGCATTGTTCTGACCCGCGGTAT
AGAAAAATCTACAAAAATATGTGTGCTGTCACTCGTAGGCAGCTATATTGTTTTCAAAAT
TCATTTAAAACCGCGAGGAATCTCAACAAATGGCCAACATATGAAAATTACGCATATTCC
ACAAATTTTCAACGCCGTGTCATACGCCTTGTTCTGAGGAAGAGTTTAAAAACTGCAACG
AAAACAGTCTAAAAAACAAAAAAATTCAAAAAATAGAATGTCGTTTTTAGTAAATTTGAA
ATTACTTTCAAACCGTAAGGAATTATAGAGAGTAATCTACATGAAAAAGATGCGTATCGA
GTATATCTTTCCAAAGCCATATCGTTTGCTTAATTCCGATGAGTGGTTTAGAAAATAAAT
GAGAAAATACGCTCGCTGCAGCCCGTCATGCGCCCACCATTTTTGAGACTGTTCCCAAAC
TGCGAGGAATCGCGAAAAATATTCAACATGACAGAGTTGGGGATTTTCTGTAGCAATCCA
ACGGTATATTATACGCCTTATTCCGGTGAACGGTTTAAAAACTGAAATGAAAACTGTGTC
AAAATAGCGCGTGTCGATGTTTTTATGACATTGGAGTGCTTGTTTTGAAAGGGATGCGGT
GCACTACCATTGAGCGTGTAGTTGGAAAGTGTTAGCAGTATTAGCAGAATAGACGCGTGT
GTGTGTGTGTATACATAGGTAACATATATATATACACACACACGACGCGCGCTAATACTG
CTAACACTTTCCAACTACACGCTCATATATATATATATATATATA
