Contig Data
morexGenes
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Map Locations of contig_9707 (3986 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_9707

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81592 1 2802 bp MLOC_81592.1 Available Available LOC_Os09g39270.1, FRAME:-2, EVALUE:0.0, 13109.m03932 protein ZOS9-20 - C2H2 zinc finger protein, expressed





CDS Structure of MLOC_81592






Contig Sequence (3986 bp)

>contig_9707 3986 assembly3_WGSMorex_rbca.fasta
GTGTCTAGAATGGGATATACATTGCAAAGCAACTACAATTATTTAGGTATATAAGTGTCT
AGAATGGGATATACATTGCAGAGCTGCCACCACACAAAAGGAAAAATACATTGCATACAG
AATCCAAGCACAGCTGCCTCCAAATCAAATCAAACAAAATATAAAGAGAACATGTCCATA
CACAGAATCTTGAGCGTACTCAACCGTGTGCAATAACAGAATGACACATAATCTTGCATA
CATACATACATTCAGCTGTGTGCCATACCAGAATGACACATGGTTACTGCACAACCAAAA
TGCCTCTAAACAAGAAGATAAATAACCTCCATACAGAATCCAAGCAGCAGCTACATCCAA
ACAAAATGTAGGTATTAGATCTAACTGCCACGAGCAGTTACTAGTGCCCAAAGCAACTTT
TCCTGTACAGATGCCTGTTCGGAGAACAGGCGCCTCTCCACAAACCGACGCTTTATACAG
GCGCCTCTTCTGTAAACCGACATCCCAAACAATCGGGACACCATGTATAAATACTCCATG
GTGATGATCAATGAAAGCACAAGTTCCATTACATTCAACACAAAATTAAGAAGAAAAACC
AACTTTCAAGCAAAAAAATACATTGTCCCGACTCGAAACATATAAATCTTCTTGTGTACA
TCCAACTGTGTGCAAGTAACAAAATGATGACACAGGGCCGAGTGTTACTGGTAGATACGT
TCACAGACAAGCAAAGCAAGAGCCAATTAACTAGCGAGTTCAAATCTGCATCCATGATCA
GGTTCTATTGTCAGTTTGGTTTTAAGTACAAAAAGCCACTACCACACCTCAAAAGCTGAG
AAAAAGTTTGTCAAAAAACAGCAGTAACTCGACGACGCTCGCACCCGTTTCGCTCGCCTG
CTCAAGGGACAATAATAATACACTCTTTCGCTAGCATACATGCATGGCCTCCTATGAACA
ACAGAAAGATCAAACTTATGTCATCTGACCCACAAAATGTTGACTCAGCTGGGATCAAAA
TGGCCGACTAATTGGCTGGGTATGCTTAATTATTCTTTCTGTAAAAACAACTTTCTACAC
GACAAATGGTGGAGATCGAGGGACGAGTTGACCAAAACGTTGCCGATGTTATCATCACCC
CACCTGCAGTATATTATCGATCGCCGCTGTGCATCGACCTCATGAATATGCGCATCCATG
TCATCATCTGAGGCTCTGCTGGGCACCAGACTCCATGACAATCCACCTCAATGTCATCAT
CTGAGTTGCTGCTGCTGCTGCTGTTGCTGCTTCTATTGGACATTGCAGACATACTAATCC
ACCTCCATGCCATCGCTTGAGATTCTCGTCATACATCTTGCATGGACTATGGGCGCGAGC
TCTTTACTCTGGGAGCTGCCCCCGCTGCCACTCGAGCGATCATAATAGACAGCATCCTTG
TACATCCACTCGCTCCTATCGATGGAATACATGTCATCAAACTGCTCCCCGCAAAGACAG
CAGATGATCTGGCTCTCGTCTGCAGGCACCATAAACTCACAAACCTCCTCTGCAGTTCCC
AGATCTGAATCAGATGCAGAGTCCAGGAAGACGCTCTGCGGTTCAGGTAATCTGTCAATC
CAACGGCTCTTGCTAGGGTACCATCTTTCAGGTGCGATGCCAGTATTTCTAGCCTCCTCT
GGCCCATTGCAGGCAGTGTGTGCACTGAGCTCATCTTCAAGTCTAAATCTTAAACCACAT
GTTCTGCATTGATGGCTTTGGTCATCAAAGAGTCTGTTGACCACCTCTGTACGGTGCTCG
CGAAGCACCACTGGTTTGAACTCAAGCCCGATTAGATTAGCCATCTCGATTTCAGGAGGT
TGGGTCAACAAAGCTTTTACAGGGGTAGGTGTCTCCTTAGCAACTGAAGGCTGAACGATT
GGCGGAGGTGGAGCTGAAGCACTGACATCTGATGTGCTCGGACTTGATTTACTGGGCTTT
CTTGCAACAGCAGACGAATCGGTGGACGGTGAAGAAATTAGCCCCTTTGCAACCAGAGAA
CTGAGAAGACTTGACAGTGGTGCAGCTTTCTCAGCACTCTGTGTTGGTGGTGGACCTGGT
GGCAAAGGTGGGCGGAGAGAGTTTGGCGCATGAGGCTTCAAAGGGGCATTTTCGCTGGCT
GAGGAAGATGGAAGAGATGCCAACCCATGTGAATGCGGGACGGCATGATCACTTGTGTTT
AGTATGAATCCACCCTTAAAAAGACCAGCCAATAAATTACTAGCACTTATCTTATCTGAC
TTTGCATGTGTGGGATCACTGGGCAGGGAGACCTCTTCAGGCTGCTGTTCCATTCCGGTA
GACAGAGGCAGATGGACAGACGGCCTAAACAGCGATGAAGAAGTTTCTTGTGAAAAGGGT
TGATGAAATGGCTTCGGATGTGGCTTTGACTGCACAGGAGGGTGCTTTTGAGTCTTCTGA
GAAGCCTGTGACAGAGTTGCTTGCAGACTAGGCCGACCCTGGGAATTCGCGGAATTTTGA
GACAAGGCATGAGCTCTTTGGTTATGCTCTTCCTGGGGATTTTGACCCAATGGCAGAAAT
GATCTGGAAGCATAAATGTCATGCTCCGAGGAACTTGGGGAGCTCTCACGTGCCTGGAGA
GGTGGCGAGGAAGGCGGCCAATATTTTTGTTTTGCACTTTCAAGGCTTGATCGTCCAGCG
TAGGCACCTGATAATCCAACAGGTACAGATGAAGTGATGCTTGGTGACTGATTAGAAAAC
CTTGATATCCTGGGATCCCGCCCAATGTCTGAACGAGGTTTTTCCTGGGATAACCAGAGA
GAGGAGCCACGAGATTCCGGGAATGGTTGTCCTTCAGGCCACATATCCCTATCAATTCTT
GGTTCCCCCTCGCGCTTACTATGAAGGTACTCTGCATGATCCTGAACAATTAAAGATGAT
CAGAACATAGAAATATAGTGTAAAGGCATGCATGAAGAAAATTCAACATGGTACATGGCA
AATCACAAGGTTCAAAAAAAAACATTATAGGGTGCAAAGTTGAAGGCATCCAGAAGTTAA
ATATGTCAATATTTACAAGTAAATAACTTCCCATTAAAAAAATAGCACTGCATATATATT
TTAAAAGTTTTGCTCCACATACCATGTACGGTGCAAGTCTTCTATCTTGGCTTGTTGGAT
GTCCAAATCTTGGGATGCTATCTTGTTTGTGGAAGTCAGGGTCCAACGGGTCTCCAGGCT
CTGCCCAATTAGCCCTATGGAAGCTTCTAATATTGCCATCGTCAGCCAAGGGTTCTCCTT
TCCTTGCAGAACTGGCACCTCCATAATCTGCTCCTTGAGAACGTATGTCGTCCCAGATGT
ACTCTTCTTCCTCAGAGTTCTTCCAGCTTTTGTCAGATGATGACAGCCTACCAATCCTAT
CAGAATTACTGACAGGAGTTGGGAGAAGTGCACTGTCCAAACGTACAGAACCGGAAGAGC
GAACATCCTTAGTTGCATATAAATGGTTGCGTCTGTCGAATATTTCTTCAGGGGAACTAA
CACCTCCAGTGTAATATGCACCCCCAATTCCGTCTTGGCCTTTGGGCTTTGAGCGAACTT
GACCAGCACCCGCAATTCCAGGGCCCCTCACGTCTCTATCTGGCTTTTCATGAATGGGGT
TACTAAAAGTATCCTTCTGTGCACGCTGTAAGTTTGGCAGATCATAGCAAAATATATCAG
GAAAAATACATAAAGAAAAACGAAGGAGGCCACGTAAGTTACATGTAGAAACATCAAAGA
TCAAGAAGTAACTTACAGGCCTAGAGTTTAGAGTATCCAGGCGTCTCCCAGTGCCTTTAT
CAATACCAATCCTGGTACCCCTTTCGATAACATCATCAGCATCAGAAATTATAGGTGTCT
TTGCACCGGCTCCCAGAATCCCCTGTCCAAATTGAAGGGAAGCAGTATCAGAGAAAGAGT
CCACGGTGTTCAACAGAAGGGGGTGG