Contig Data
morexGenes
Links



Map Locations of contig_96865 (5137 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_96865

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81534 2 3035 bp MLOC_81534.1 Available Available LOC_Os05g39730.1, FRAME:+3, EVALUE:1e-137, 13105.m04190 protein SAG20, putative, expressed





CDS Structure of MLOC_81534






Contig Sequence (5137 bp)

>contig_96865 5137 assembly3_WGSMorex_rbca.fasta
TTCACGAGAGGCATAACCGTGCCTCTTAAAAAGAAAAAAAATGTGTTTTTTTGTTTTTCC
GCGAGAGGCACGGTTTTGCTTTCACGAGAGGCACGGCTCCATGCCTCTCGAAAACAGAAA
AAACATATTTTTTATTTGTTTTTCTATCGCGAGAGGCGCGATTTTTTGTCTGGTTTTTTC
ATGAAAAAGAAGTTTGTCAAAATCTATCAACATGAGATCTAGTTTTAAAAAATTTGATGC
GAGAAACCCAGTGGTGAAAACGGTTCAAGATTGAAACATACGGTTTAAAAGAGAAAACAT
TTTAAATATATGGATCTAAAAAATGAAAAAACTCTAGGTTGCAATAAGTGACACATATGC
AATGCGCTACTTGTCACAAACTGTAAAGATGAGAGTGATTTTTGAAAAGAGTATTTTTCA
ATTAGTGATATTGGTATGTCCGACCCTCCCTTCTATCTATACCTACTAATATTAATACCA
TATACTATACTAATACTACTACTACTGATAATAATAATTATAACAATTGTTAACAAAATA
ATAATAATAATAATAATAATAATAATAAACGAAAATAGATATCCTTAATCCGTCATGCTA
TTTTATAAAAAACATCTTAATGTTTATGACATTAAACCCGTAGTACATATCAAATATTTT
TTTAAATACTAATATCTTCTAAACTGTAACTTCAAATTTAATGTGTTATATATGAAATTT
GATTAAAAAAATATGCAGAATCTGAATATGATGTTATTTTACTTGTTAACCATTAGGATG
CAATCTTAATGAATATTGATCCGGATTGTGGATGAACATCTCAGCAAAATCATGATTGGA
GATGAAATTGAAGATCACTTGCGTTTTTCTTTATACTCCCTCCGTCACAAAATTCTTGTC
TGAGTTTTATTTAGAAATGGATGTATCTAAATACTAATACATGACCAGATACATTCATAT
TTAGACAAATCAAAGACAAGAATATTGAGACGGATGGAGTACGTGTTAAATCTACATGCA
AGTCATGTTTAAATATAAGACTCGTGGAATCTTAAATTGCGTTTTTGTAGGTTATGATCA
TCTTTATTTAGGCCGTAGCTATAAATACTCAGATTATAGAGCATTTTTTGTAAATTAAAA
ACGTGTGATATTTTTTTCTTCAGTTGGAACATACGGACCCTTTTGCTAGTATAAATAAAT
ATATCAAACGCACTAAATAACATGTCAAGGAAGGAAGCAAGGAAGACGTGTTTTAGTTGG
TTGAATTTTCTAGTTGGTCCAACTCTCTGAACGGATGGGATGACCTTTTCTCTTGATTTT
GTCTGACCTTGCGTTGCGTTGCATTGCACTTGACGAAGACAACTGGGCTACTTTTCTTGT
TCCTTGTCTCTATCTCTCTTGTATTACTCTCTTCTCTTCTCTTCTCTTCTGGTTGTCTTC
TCCTCTCTCCTGCAGTAAGTATTATAACAGTAAGTATTAAGAATAGAATTTAATAATACT
CCAGAATAGAATAGAAGAGAAGAAGGTCCAGCCTGGTGGCGGCCACGAGAGGAGAGGAGA
GGCCAAATCAACCAACAAAATCTCCGCCGGCCCAACCTTGCTTTGTTTCTTCTTCTTGTT
TCCTTCATCGGTTGGTTGTAATTCTATTGAGCAGCAGCAGCAGCTCTTGTTTCTCCTCAA
TCAAATCTCTTAATCCTAGCTTCCCGGGAAAAAGGATATATCAACAACAAGAAGAATTCA
ACTCCATCCATGCATCTATCCTCCTCGCCTATCATATTCATTCTAGCAAAGCAAAGAGGG
TCTCTCTGCTCTCAATCAAAAGGGAAGAGCAGAGCAGACCAGAGGTGAAAGCCAATCCAT
CCATCCATCCATAGGTGTTGCTAACAAGGGGGGGTTGCCGCATGCACGCTGGAAGAGCTA
GTAAGGTATATATGTATGTACCATCGTTTAATTCATCCATTCATATCTGCTACCTTTCAT
TTGTTCTTGCTTCCTTAACAAAACTAACTAGTACTCCCTCTGTAAACTAATATAAAAGTG
TTTAGATAACTAAAGTAATGATCTAAACACTTTTATATTAATTAGTTAATTACGGAAGGG
AGGAGTATTTTTATCTACTGATTGATTGATTGATTGATGCATGCGCCAGTGGTATAATTA
TGAATATTTTTGCCCTCTACTACTTAATATCGATCCATCATATGCAATTAATTGTAAAGA
GGAATTTTCCTTTCTTTTTTAGAATATACTACGTATATATTATATATGTTATATATAAAC
TGGGCTACATGCAACACACTAAATACTGACTAGTAGCTAGTTTGCAAAACTAAACTTACT
AGTGTGCAAGGCAGCCACTTTTGCTTTGAAGCAGGCTTCCAATTATGTATTCCCTTTTTT
ATAAGGTTCTTCCTTCATTCACCCTGTTAATTAACAATATTAAGTGGCAGTTTAATTAAC
AATATTGTATTCACTGTTGCTCCATATACCGCCTGCACAATATGTCCAAGCTAGGTTATT
ATTAAGCGGCAGTTTCATGACCCTTTTTTTTTTTGCAGAAAATCCAACCAAATGGGAAGA
AGAAACGAGGCCCTGGCTACTAAAAGGGGATCAGATCAAATCCTTATGTGAACAGGAACA
GCTAGCTACCTCTTGAGATTAGAACCAACATTACACTTCCGTACAAGCTAGCTAGCTACT
AGTTCATTCAATCAAGGAGAAAACATAGTGCATGCAAACAGAACATCGATCGGAGCCTGT
TGAAATATGGTTGCAGTTGCAGGTGCAGGTGATGGTAATCACAAGATGATACCTGCTGCT
GATGACCAAGAGGCTGCAGCAGAAGGGCCTGCAAAAAACAAGAGAGATGCAAAAGACGAT
CATCACATTGCCATCCAAGACTCATCCCAACAAACAACAGACGACAGATTGATCCTGAGC
GACAAGACCAATGTCCAGGATTACGACTCCTTTCAGCACCACCTGCAGACACCAACCTCG
CCGCCCTGCTACTCCACCGACCACATGCTGGCCGTGGCCGGTGCCGACCAAAGACACAAC
AACAATGGCTCTTCTTCTTCTTCTTCTTCTTCTTCTATTTCCCACCACCACCAGCAGCAG
CAGCAGCAGCAGCATCAACACTCTTCTCGGTCTCGCCCACCACCAAGAAAACTGCAGTCC
AGAACACGGCGACGCTTGGCGCCGTTCGTGAGGAAGATCAAGTGGGGACCATTGTGGGAC
AGGTCCAAGGAGTGGATCAAGAACCCCATGAACATGGCTCTTTTTGTGTGGATCGTTGCT
GTTGGTATCTCCGGCGCCATCCTCTTCATGGTGATGACCGGGATGCTCAACGCCGTGCTG
CGGAGCAAGTCGCACAAGGACACGTGGTTCGAGGTCAACAACCAGATACTCAATGCATTG
TTCACCTTGATGTGCCTGTACAACCACCCGAGAAGGTTCTACCACCTGGCGCTGCTGTGC
CGGTGGAGGGCCGGCGACATGGCCGCGCTCCGGGAGACCTACTGCAAGGGCGGCACCGTC
AAGCCCAACGAGAGGAGGCACATGGCCGTTGTGATCCTGCTGCTCCACCTCAACTGCTTG
GCGCAGTACGCGCTCTGCGGCCTCAACCTCGGGCTGTCCAGGAGCCGGCGGCCTCCGGTG
GGCGTCGGCCTCACCGTGTCGGTTGCGATATGCGCCCCGGCCGTAGCCAGCCTGTACAAC
AACCTCAGCCCCCTGGGGAAAGACTACGAGGTCCAGGCCGCCGCCGACGACGAGGAGTCC
TCTTCTTCCTCTGGTTCGCGGCGGCGGCTCCAGCACAAGATCAAGACCGTCGAGAGGAGG
TACTCCTTGTCCCCCTCTCCGCAGCGACAAGGACAAGGAGAAACGTCAGCTTCTGTCGTG
GGCGTCGAGATGGAACTAGAAGAAGAAGATGGTACTAGTATGTCGCCGGAGTGGTCCGGC
GGGCTGGTGGCGGACCTGTGGGAGGACATCTCGCTGGCATACCTGTCACTGTTGTGCAGC
TGCTGCGTGTTCGGGTGGAACGCCGGGCGCCTCGGGTTCGGCAACGCGTACGTGCACGCG
GCGACCTTCGTCCTGCTGTGCCTGGCGCCATTCTTCATCTTCACCCTGGCGGCCATCAAC
ATCGACGACGAGGCGGCCAGGCTCGCGCTAAGCCTCGGCGGCACCCTGCTCTGCGTCCTC
GGCCTGCTGTACGGCGGGTTCTGGAGGATCCAGATGCGCCGGAGGTTCGGGCTTCCCGGA
AACGCCTTGTGCTGCGGGAAGCCGGACGTGACGGACTGCTTCCAGTGGCTGTGCTGCTGC
CCCTGCTCCCTCGCCCAGGAGGTCAGGACCGCCGACGCCTACGACATTGTGCACCACAGG
ATGGTGTGCCGCCGCAGACCCGGAGACGGCGACCACCAAGAAGAAGAAGAAGAAGATGAT
GATGATGATGATGATGGCAGCGGAAGCAGCAGCTCCCGGGTGCAGATGCAGCAGCCACTG
AGGTTTGCAGGTGTTTTTGCTTCAGAATCAGATACAAATACAGTACCCCCTGCTGTGCCT
GTTGCTGTTGGCATACAGATACAAATACAGATTCAGAAACACTAAGTTAGATCAGTAAGC
AGGCGCAACTGTAAACCTTTAACAGCAAGCAATATCATATTATTAATTAGAGTATAGTAT
AATATACCCTGTCTGATAATATTCTTTTGTTGTACTCCTACTAGTCAGAGCATCTTCAAC
CCTAAACGCGCCTGGACCAGCGCTAAAAAACAGATTTACAACCCGCGGTTAGCTTTTTTT
GTTCGCAACATATTTTAGTGCGCGCGACGCTCCAACAGATGCTGCAAATAATAAACACCC
AAAACTTATTCAACACGTATATTTTACATATAGATAATAAAACATAGATAATATATTACA
CATAGATAATAAAACTAGTTCAACACATAGATAAAACTACTCCGAGTCATCACTGTGGGT
GCTGTCCGAGGTAGATAAAAATGCGTCCTCCCAACGTTCATCGTCGGAAGTGAAGATGGA
CGGCAAACCATTTTGGACGGCCCCGCACTGCGATATGGCGAGTAACTTGCGCCGACGCCT
GTCCTGCCGCTCCGCGCGACGCCTTGCCGTCCTCTCC