Contig Data
morexGenes
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Map Locations of contig_9652 (1571 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_9652

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81480 2 619 bp MLOC_81480.2 Available Available LOC_Os05g07050.1, FRAME:+3, EVALUE:4e-17, 13105.m00763 protein pre-mRNA-processing-splicing factor 8, putative, expressed





CDS Structure of MLOC_81480






Contig Sequence (1571 bp)

>contig_9652 1571 assembly3_WGSMorex_rbca.fasta
ACTAAAGGCTTTGTTGTTGTTGTAATACATTTTTCTTATTAAATTTGAAAAATATTATGC
AGGTTCAAAAAAATTCGGAAATATTACACCATCGGCCTAGCCGACTGGCTCCAGTAGGTT
TTGCCAAAGCCGATTGGTGCCTGTCGGCTTTGGATAGGCCACTCGGCCGCGCTGCATTGG
CTCCACTTGGCTTAAATTTGACCAATTAGTACTAATCGGCCTTGCCGGGACCAATTAGTA
CTAATCGGCTTAGTAGTGACCAATTAGTACTAATCGGTGTTGGCAAAGTCGATAGGTGCA
TGCATTCATATTTTCCTACGTAACTAAGATTTTCTGATGACCAGAATGCCAAAATAGCCC
CTCTAGTTTCCCGAGTGGCAGATCCCGCTATTGGATCAGGTGGCAAGAATTCTTTTTCCC
GCCATAATTTCCTGCTTCTGACTTCCCGCCCTAATTTCCCGCTTTTAACTTCCCGCCATT
GTTTCCCACTTCTTAGTTCCCGCCGATATCTCCTGCCATAGTTTCCTGCTTGTTAGTTTC
CGCCTATTTTTCTCTTCTGAACCTATAAAAATTCCTCCACACTCCGGTGGGTAAGCAGTC
CAGTGTAGTATCGTAGTTTCGCCAAGATGTCTCATTATCCTTTTGATACTAGTTTTCTCT
CTGATATGTCCCAGTGTCTTCTGCGTTTAGCCAGCAATTTCAAGATAGGCAATAGAATAG
TTTCATGAGACGAACTCATCAATAGTGACATCCTACTGAATGAGCTGGCTCACGCATTAG
CTAGGAGTGGGTGGCCTCCCGGGACCTTCGAGGAGATATGGAAAGAACTTCTCAAATTTA
ACAAGACCAGCATAATATTTCTGATTTTTTTTGAATCTGCATAATATTTTTCAAATTTAA
TAAAAAATTGTATTATTTAAAAAAATCCATAGTAAAACATGGTGGTCCAGATTAGAGCCA
CCGTGGCAATGTGCTGCTGAAAATCCTTGATCGAGAGTCCTAAAGTAGTGAACTGTTCAT
TCTGTTTTGTTCTTCAGGATTTGACGTTGCATCCTAAGATTCTGGAGAACAACAATGTCG
TGCTCGCTGACCGCATACAATTGACTCCGTAGCAACAAGGATGATCGTGCTCGCTGACAG
CATACAATTGACGCCGTAGCAACAAGGACAACGGTAGCAACCCTGGTGGTTACCTCCCGA
CTCACTATGAGAAAGCCGAGATGCTTCTCAGCGACCGCTTCCTTGGATTCCACTCCCTCT
GTATCAAATATAAGATGTTTTCTTATATACAAAGGGAGTTGTCTTATATTTTGATCATAT
CAATCCGTAAGCGTGCTTATGAGTACTTTGCATTTGTTCTTGAGAACTTTTCAAATATTA
CTCACTTAACTTATGTCTCTACCAGGTTCCGGACAATGCTCCCTGGAACAACAACTTCAT
GGGAGTGAAGCACGGCCCACAGATGAAGTACATTATGAAGTTGGGGACGCCTCGAGACTT
GTACCATGAGGACCACAGTGACATGGATGAAGTTCGTAAGACACCATGCTGTAGCGCGCC
CTCCACCCTGT