Contig Data
morexGenes
Links



Map Locations of contig_9611 (4809 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_9611

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81410 1 892 bp MLOC_81410.1 Available Available LOC_Os12g09120.1, FRAME:-2, EVALUE:8e-171, 13112.m00966 protein mRNA-capping enzyme, putative, expressed





CDS Structure of MLOC_81410






Contig Sequence (4809 bp)

>contig_9611 4809 assembly3_WGSMorex_rbca.fasta
ATTCAAAATCTGTCAAATTCTAGCCAGTTTCAAAAAAACGCTTAAGTGCGATTAAGCTGC
GCTTAAGCATCCATTGCTCTAAGCTGTGGCCCTCCGCTTCGATTATGCTTTACGCTTTTT
TGAACATTGATATAGTATGTACTTTTAATTTCCATAGACGATGACCATCATATATCAAAG
CCAGAAAGGACAAGACCACCCTACCTGAAATATAAGTCCATCAGATTCATGTGAAAGTGC
TGGAATAAACTCCTTGAGCAATTTCTTCACGGTTGAAAGCAGCCAAAAATCCTTTCTCCT
TACCTGATAAAAGCCAAATATCAGAGAACTATTCAAGGTTATCTACTGAACATCATACCA
CAATAAAATAAATAAAATAATCCATCCAGATTTAGGTACCGAAAAAAGTTCCAGGTCATA
TCTGTATGATGGATTGCCTTTAAGACCAGTTTCAAACTGTTTCCTCTCATAGATGCGTGG
ACGAATTATTTCATCCTCAAGTAGCTTCCACCTGTCAGAAAAGGGCAACTGCATCCGGAG
ATTAAATAAAATGTGGTCACTACAGTACAGAGTAATGCAGATGCTTAAACTTCAGAATCA
CCATATTTCATATATCTATGTAGATTAAAATCATTTATACACAAATATTTCATCAGTGAT
ATCTAAAATTAAGAGGTTACTTCTATCAAACAAAATAGTATAGCTATATTCTTGTCAAAC
ACTTATGATAAACTTGTAGTGCTCTATACTGTATTATTATCTCACAACAATGAGTTCCCG
TGAAAGGTCAATGAGATCTCTGGTACTCGTGCTACACCCCCAAAACAGATGAAATACCAA
AAACAACCAGGCATATACACATGCAATTGAGAAGGTGATAAAATGGCAACTTAAGTTAAT
GATAACAAATAAGAAGTTTCTACCTTGACTTTGGAGGAGAAATTAATTGCCATTAGATCA
TACGCTAAGTACCTCCGCTTCAATGCACCACCAGGTATGGTGTCTACAACCATTTCTCCA
TCGATCAACGTAAAGTTGTGGAAACCCTTGAATTCAGAAAACAGAGGTAAAGTAAAATTC
TGCAATATAATGGAAGAAAAGAAAATGCACTACGCATGTTATCCAAACCAAAAATGAGGC
CTTACATCATTAACATTCCTAATAGGAAAACGCATCTGAACTCTTCTAAAGCAGAAGTTT
CGGTCTATTAAGAAACAGCCATCCCGCATTATAAGCATCATGTATCGTGTTCCATCAGCT
TTCCACGTAGCATAATAATATCTTTGTCTCAGAAGTTGCAGGTTCTCGCTTCATATTGAG
ACAAAAAATAACATGAGTTAATGGAAGGTTCAAAAGGCCAAAACAGAAGCAAGAACACTA
TAACGGCTATTATTTCTTAAAAGAATAACTCCTTCAATTCATACTAGCCGAAACTAGTTG
ATGGCGGACCAGCCTTTCTTTTTATTATAATTCCATCGACACGCATAACATTTTCCTTTT
CTCGATATTTCCCTTTCAAGCAAAAAAAAACTACAATTATGGCAAACTAGTTGGCCGCAA
CAGTATAGCATGGAACGGCAGAAGACAACTGTAAGACCTAATGTTCAGTGCTTAGGGGGG
TATTACATTAAGCATGCATGGTGCCTGTATGTATTTCGATGTATGTATTTAGATGACACA
GGCACTCTCTTGAATGTTGCCACATGCTATATAAGGATGTGCACCAAAATGGCAACATTA
AACAATACAACACGCAGTAGAATGCGTCAACTATACCACAAGGGAAATAGTCTTTGCCAT
GGAGAAAGTACCAGTCAGAGCAGCAAAAGGAGGTGGCTAGGCATCAAGATTTTTTAGGAG
TGTATGGTACACAAGGATGAAGCAACATGACCTTGGACCAGGAGGAGGAACTAAAGAAGG
GTGTCATGTCATCAACTCATCATTGGGTGGTTAGGCGACAGAGAGCAGCAGATATGAGAT
AAGATAGCAAGAACTAAAATGGGGAGTAGGAGGAACTGGTGAGAAAGGTAGGGAGTTTAT
GCAAGTTTTACCCAAGGATATGAGGCTATAGTACTGGACTGTCCATACTCCAGTCCGAAT
GAAAGGTTGAACTTGGTTCCTGACTCTAATTGTGTTTATCCTTTCCTCTAGCTTCATTCA
CCTGTTTTTTGTTCAACAAGGCCTTAGAGGCTTATAAATTGGAGCTACATTATGGTCAAC
TGATATTTGCATGTGCCATACTTTATGATTTGCATGCCCTAGTTGGAACACGCTCTGTGT
ATAAACAAAGAATTGCATTCTCTATTCTCTACTATCTACTCCCTCCGTAGTGTCAAAAAC
GTCTTATATTAAGTTACAGAGGGAGTATTTGGCACATCAACCATTCTTGACTGCAGAAAC
ATTTCCTCAAACAATGCTTGTGTCATCAGATTATAGCCGGTCAACTAATTCCAATTCCCG
AATCAAATTTGATAGGTGAGAGGTAAGAGACAGAGAGATGCATCTAAACAAAAGATACAT
CTCAAGGACCAAAATGAACATCAAGGTTATTCCAGACATATAAATCTTGTTCTGCGAACC
TTAAAAAGACAAAGGGTGTCAATCTACAGGTTTACTTATATAAATAGTACACAGAAGGGT
GTACTTAGGTTGTTTCAATATGAGGTGAATACTGACTTTTATTGCTTGACAAAATGAACA
AACAACATCTGCACTGGGATAGAGTCTTGTACACATATTCCAACTAAGCAAGATAACCAC
TGCATGCTAAAAAAAATCTACAGCTATCACCAAGACACATTTCTTCCTTATATGGCAGTC
ATCTGTCGCTTTACTTATAAGAATTATTCTAGGGGCAAACAAGCAACTCCCTTACTTAGT
ATACAATGTCAATATATGCATATGACATATTGGCTTCTACAAAGTGCAAAGAAATATTAG
TGACCACAACAAAGTAGAACAAATTATGTAAAATGTAGCCTCCAATGTATGCATAATTGC
ATACATAACAAGGAGCTAATGCCTTAATAGGGGGTATCTGGTTGCCCTCAATTGTGCTCA
TCTCTAATTTAGCATATAGTGGGGTTATTTGGTGGGAAACTGCCTAAGAGAACACGCATT
TGTACACCAAAACCACTTTGCAAAAACAGCATCCAAATTGGATTAAGTGATACCTGTTAA
GGGAAACTGGATGAGATCCTGGAAATTGAGCATTAGCTCTACCCTGGTAAGCAAAAGGGT
AGCAGGACATTGTCAGAAGTTTGCCTTTGTGGGCACAATGATTATACAGGGATAGTGTGG
TAAGTTCAAAATAAAGGGATAGCTACAGTTTAAAAAAAGGATATTTAGAAAAAACAAGAC
GGTGTAATACGCACAAACTTCAATGCAATGATCTCCAACACCAGCAAAAAGAAGTTCTCA
TCGTCACACCCATTCATCGAAGCTACATCCACTAATAAATTAAATGGATGGCCATAGATT
CTAGAGAATACAAAGGTATCATTAAGTATCATCTGTGTTTGCAACAAGTTAACTGTGTTC
ATATTTTAATCAAATAAAATTCTTGAAACCATAGTACCATACTAATCCAAATAAAGCGTA
ACTTTGTAAACTGGTCTGAGAAAATGGAACTAGTGATCGTATAATCAACATAGCTATGAG
TACATACATAGTGGCACAGTGACAAGACCAAACTACGCAAATGAAAAAGTGACAACATTT
TTCCGTCACCATACAGCAAAGGAGTCTACGTCATTAACAACTTTAGAGGTGGGGAAAGAC
TGAGGAGCATGTGAAAGATGTGACTAAGAGCAAAAGACAGACTTAAAACTTACATTGGGC
ACAAAATCAAGCAACTTGAAACATATGCCACGCAAGATATCTTGCTGGTCAAAAGGTACA
GCATCCCCTAGAACATCGTCATTAGTAATGGCCTTATCATCTGCAGGTTCCTACAATAAG
CAGGAATGTTTTGTGAAACATTAACAATATAAGGAAGTGTTGTACGGAACTATTAATACT
TGAGTAGAACCCTGGACCTATCTAGTAAAAAGGATAATAGATTCACAAGGAAACAGCATA
TGAGATGGCATGTAGGTGTTGATCCAAATTCAATGCGACCCATGCCAACTTTGTAAGCTT
TCAAAAATATCCTAAAATACTGTTGCCTTGGCTAATAGATTTGTTATTTTTGTATTGGTG
AGATGTATGGGGAAAGGTATTACGTCACACCGTAATATTTCGTGTCAAATACAAAAGTAC
ATGAAAAGGATCTTACTTTCTCCGAATATAATCAAATTTCCTTAAAATGTTGCTGGCATA
TAGAAAATATCTAACCAATGGTTTTGATCATTTTCTAAATTTTGCATGCAAAGTTCATAG
GAATACAAATGCTAGTTTACACTTTACACTGCATGTACCCCACATGTTCTTTTAGAACAA
ATCTATTAGCTGGAGGTTGTCAAATCATCTTATAATGTTGACCTGGGTGTGGCATTAACA
GAGAATTTTCCAAACATGTACTGGAAGAAACACATACTGGTGACGGTGCAGGCTCGCCAT
TGTCGTCATCGTCATCCTGCTTAGCTTCACCATTCAAATCAAGATCAGAAGGCCTCTTCC
ATTCTGGTGTTGGTGGACATGTGATACTTTCAGGAACTTCATGATAAAACGAATACAGTG
CTTGAATGTAGTCGGTTTTATATATTCCTGGAGGTCGTCTTTGAGCAAATATATTTAACG
CCTAGCAAACAAAAGATTTAGCCAAGGAAAAAAATATGACAATAAATGGATAAATTACAA
TTGAAGCAT