Contig Data
morexGenes
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Map Locations of contig_95925 (5878 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_95925

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81365 1 755 bp MLOC_81365.1 Available Available None
MLOC_81366 1 461 bp MLOC_81366.1 Available Available None
MLOC_81364 2 1446 bp None Available Available None
MLOC_81367 3 756 bp AK250581.1 Available Available None





CDS Structure of MLOC_81365






CDS Structure of MLOC_81366






CDS Structure of MLOC_81364






CDS Structure of MLOC_81367






Contig Sequence (5878 bp)

>contig_95925 5878 assembly3_WGSMorex_rbca.fasta
GTCCATGGCCATGGCCGCTGAGCTCCGAGCTCATGAGCTCCTCCGCTTTTCGCAGTAGCC
TCACCGCATTGGCCGCACTTCCCTGAGCACGTAGCTGCCTCCAGCTCGTCTCCTCGTTGC
CCCTAGCGACGGGCCCGACCTGGCCGAGCTTCGACCGCCGCCTCCAGCGTCGCTGCTGCC
GTCTCCGGCCATCCCTCAGCCCCCGAGGACCCTCATCCGATGCGGCTGAGTAGGGGCTAC
GCCCAGTGGCCTCAGGTGCCGCCCCCGTGCCCGGTAGCATGGTCTCCACCGCGACTAGAG
ACGTTGCTTTAGGAATTGTTTTCGCAACGCATCCGTTGTTTCTGCAACTAGACCGTTGCT
TCAGAAATTAATTGGTTGGGAGAAACGACGGAGCCGCGTGCTAGCAGATAGATCGGGCGG
CTACGAGCGCGTACATCGAGCGGTCATTCGGATGGCGGATGTTTAGTATGAATCCGTCGG
TGGACGTCTAGCTGTTCCCTGTTATGTATGTAGCCCCTAGTAAAATATTTTTTAAAACTT
ATATTTAGAAATGGAGGGAGTAGAATACATGGTACAACTAGATAATCGTTTGTGTGTTGC
AACAGGAGCACACATCCCCCGGGAAAAGAAAGGATCACGCATATTTTGTATCCACCCACC
ATGATTTACATGTCATTTTATCGTTAATATGATTACATACTAAAATACATTTAGCCGCCA
ATTGAATCAATTTTATTTTATTTGGTAAGTCTTGTGAGGCTGTTGAGGTGGGTTTTATAG
AGATTCCATTATGGACCATATACGAATCAAAATGAATGAATCTGCATTTTAAAATTATGT
CTACATACATCTTTATGTAGTTCGTAGTGAAATCTTTAAAAAAACTTATATTTAGAAATG
GAGTGAGTAACAATTAAGGAATACATGTTGGTCTAGAAAAAAAAATAAGGAATACATACA
TTTCCTTTTTTAGTACTCCCTTCATCTCAGTTTATAAGTCCGGCACGTGTATCTAGGTCG
TTAATTTGACCAACTTATTGATAAGCATACATTACAAAAAATATATCATTAAAAANNNNN
NNNNNNNTATTTTTTAATGATATAATTTTTATATTAAACAACATATTTTATATAAGTTAA
ATTGACGACCTAGGTACACGCGCGTGCCTTATAAACTGTGACAGAGGTAGTAGTGACTAA
TGACTAATGAGTACGGAGTAGTTGTTAGATGAAGGTATGTAGTCCGTAGTGAAATGTCAA
AAAAGACTTATATGTAGGAACGGAGGGAGTATTATTTTGACGGATGTATGTGTGTGTATT
CCGTAATTTGTGGGCCATTTATCTGTCCGATTGAAGCCCAAGCCCATATCGGTCGATGGG
ATGTTGGTTTCTTCCTCCGGTCCAGTCCAGTCCACTCCACTCCACCATTCCATCCCGTCG
CCGACCGCGGGAGAGAGAGAGAGAGAGAGGGATGGCCGCCGTCGCCGGAGCCGGAGCCGG
AGCCGGAGGAGGCGACCAGATGCCGCGCCCGCGCCCTCGCCCTCGCCCGAGGAGGCAGCG
GATCCCCCTCTCCGACCTCACCAACCTCTCCGTCGTCACCCGCTTCCTCAAGCCCAAGGT
GAAGCCCCGCACGAGCCCGGCCAGCAGCGCCAGCAGCATCGGCTCCTCCACTGCCCCCCG
CATCCCCACGCCTCCTCCTCCATCGGCTCTCTCCGTCGCCGTCTCCGGTGAGCAGAGCAG
AGCAGAGCATCCTCTCCCTCCCCTTCCCTGGCTTATTCAGCAATAGCTTGCTTGCTTGCT
TGCTAGGGTTTCTTCGCCGGATTCGGGCGGGGGTCAGATAGGGGTAGGGGTAGGGGGGTG
CCGATTGCTGAACGCTGATTCAGGGAGAGCTAGGGTTTCGCCGGATCCGTGGATCACTTG
CTTGCTTCCTAGCCACGGGAAGGACCTCACTCCTCCCTTAACATTGCTCGATTAATCATG
TTCCGGTCCTTAATCGCATTATGCGAACCCATGCTTGATTATCCATCATCCATTCACTGC
CACATTAGTTTGTGCTCCTCTGCTAATTTGATAAGAATCCTTCCCAGCCATGGTTTAGTG
TGTGCTGAACTGAAGCAACTGGGCATGCTGTGCGTGGATGGTCTTACAGAGGAGTGCTCT
GCAGAAAATGGATACCAGCCACTAGCCTTTCTTCTCTCTTGTCATGTGAAAACCATTCCC
CCCCTTGTTAGCTTCATTGACACTAAGTAATATTGCGCCTTCTGTTTCTGTACATTTGGG
GAAAGAAGGAAACGCGTACGCGCGCGCTACTTGTTTCCATGGCAAGAGAAATTGAGGAAA
CGGTCACCTGCTCAAAGAGCAAACTCCAAGCTCGCTTCCTGGGCTGTACCAGAATAAGAG
CAACGGCACACTTGCTACTGAAATTCACCATGTCTCCTCCTAGTTTGCACTTGGTAACAA
ATATAGATGTTAGGGACTACCACTTTGATTGCTTCCTTTGTTTATGACCTTTTTTCCCAG
TAATTAATTGCTGTGACTGTGAGTTAGCAATTTCATTGGTTCCTTGATTTTCTTTTCTGG
CACTAGTTGCTGCGGCCAAGGGCAAGGATAAAGCCACAAGGGAGCTCCAAACCTCCACTA
CTCATCTCAACAAGATTCAAAGGATCAGGTATCTCGTACATCACCACCCCACTCACCATC
ATTTCCATATATAGACTGTTCCTGCACTTACTCGACGAATATTGGAAATGCATTACATCA
TTTAGACCCTTGTGGGCATTATTATTACACTTAAAACCATCTAGTGTTCTAGCTTTAGTC
TGCTCCACTTCATATTTGTCTACTAAAACATACATACTGTCCTTCATTTGTTCCATTTAT
CCCCTGCTGTTCCTTGGTGTGAAACTCTTTAAGTTTAAGTAATGCTGAACACATACCCCA
ATGCCAAATAGCACGTTGTAATGGTTATTTCATGTTGATTGATTGATTGATCGATCTGCC
CCTTGCATACCTCCAGTAAACCTAAGGTGAAGACTGGGGGCGTGCTGCCTGGGCCATCAT
CGCCTCCCAGCAAAAACACGAGGAAGGTATATGCATATATATCAGGTCTCCGCTCAAGTA
TTAGCATGTTACAAACTTTTTTATATGGAAATTAATTGTGAGATCAATCCCTGTTTGCTA
CCCAGCAGTGGTTCTTTGTCCATTCGTGACAGCATGTGGTTATTTCCCCCCTTGATTTCG
AAAAGAAGGTGAACTCTTTCTTATTACCACGCTGCTGTGTCTGTTTCAGATAGCAAGGAA
AGAGCAGCCGCACACAGAGCCTCTGATCTCCCCCTTATTTGCCTCCAGCAAAACAAAGGT
GAAGACTGGTGGAAATATGCTGCCTGACGCATCAACACTTGCCTGCAAAAAGACGATGAA
GGTAGGTATATATTTGAGCTTTCTGTTCAAGCATTAGCATGGTGTTAACTTTTTTATTTT
GCACCCAGTAACCCTTTTGTTGTGGAAACTATGAGATCTCTCCCTGCTTTGCTACTCTTT
GGAGCTTTCCTGATTCGTGAAACCGCCTTTGGTCTATTTGGAAAAGAAGGTGAACCCTTT
CTTATTACTTTGCTGCTGGTTCTGTGTTTTAGGTAACAAGGGAAAAGCAGCCATGCATGG
AGCCTTTGATCTCCCCCGTGTATCCCTCCAGCAAAACAAAGGCGAGGACTGGAGACGGGC
GGTCTGGGGCATCTTCGCCCTCCAGCAAAAAGACAAGGAAGGTAAATATTATCTATCAGG
TTTCTAGCAGCCCTTGCTGTGGAAATCATGAGGTCCCCCCTGTTTATTTCTCCATTTGTG
GAACTATGTTTGGTTATATTTTTGAAAGAAAAGAAAAAGAATGCAAACTCTCTTATCTTG
TTATGTCGCTGCTGTGCATGCAATGCATCAATGAATGAACGAATGAACGGATGTATTGTA
GGTAACAAGCGGGGAAGAAGAGCAGGCAGACAAAATGGAGCTTTTGGAGGATACTAGTTG
CGACGAGGAGCCCCCGGTGCCGATGCAGGGTTTCATCGAGGAGCGCAGGGCCTACTTTGC
GGAGGTCGACGCGTTTGAGCTGGTGGAGGAGTTTGCTTCGTCTGGCAGTGATACAGAGTA
GAGGACGCGTAGTAGACAGTAAGGTGGTAGCCTTAGTAAGCAGTGAGCAGTGAGTCGATG
CATGGTTTGGGACTGTAGGAGTACATGGTAGCACCCGTATATTGGTAGAACTGAATCCTG
AATCTGATTCAGTTAGTGAGGGATAAACGAGATGTAAAGTTATTTCAGTATTTTCGGAGT
TGTATGCCGAGAGACCGGGCTCGGTTCCTCATGCTTGAAGATCACGCTCGCTTTCTCGTG
CTTTCGGTAGGTTTTTCAGGCACCTGTGCGCCGCAGCAGAATGAGGCAAAAAATGTCTGC
CGCACAACTGAATTTGCTCAGCAGAATTGTTCAAATGACAGGGGAGTGTAGCTTCAGAAA
TATGATAAAGATTACAGTTTCCAGGAATTGCACGAGGGGAGAGCAACCTGAAGCTTGCCC
GTCATGTGAGCAACAGATTCAGTTATGTCCGTCAGTTACGTGCCATCTATGGTTTGTAGA
AAAAATAGGGGATTATATACGAAAATGCTAAACAGAGGGCAAACTCCACGAAGCCCTTTA
TTTTGGAAATTTTGAAAATCTCATTTTGAAGCTTTAAAAAAATATTTAAAAAATGGCAGA
TGATTATATGGACGTATAAAATATTAAAAAAAAATGGCACACGATTATATGGACGTATAG
TACATGTGCGTAAAATTTGAAGATGGGATACGTTATGATGAAAGCTACACAAAAAAGAGG
AAATCGTGATTTTGAAATGGTGGACAGTATATTTACTGTTCATTATAAAAATCGGACAAG
CTTATCTTTTTTGTGTATCTCTTGTAATATATTTCATCATCAACTTGCACACATGTAAAT
AAAACAAATTAATACGAACATGTATGATTTTTTTTTAGAATTTCTTGAAACTTCAAAATA
ATATTCTGTTTTACTTTTTTCGAAAAAGAAAAAAAAAACTCCATTGAGCCCATCCACCAA
AACGCCCTACACGATTATATCGGCCGATCATGTCAGCTCGTGAATTATAGGATTGGATCT
CAGATAACAAATTGAACCAATTCAGTTCAGTGATTTACAGCAAAAAGCCTGAATAAGTCT
CTTCATACAAAAAGCAAGATCTGGATAAACCAACAGAGACAAATTAAGTTTCAGAAACGC
TTAGTTGATAATCCATCAGTCAAGCAGGAAGCAAGCGGCTTCCCCTTGGTTCGCGATTAC
ATCAGGATGATACATATTGAAATCAGCCACCGAGACAGCCACTACACCTAATCAAACACG
AACACTCAATGACATAGCTAAATTAAGAGGGACGCTGCGCACGCGAGAGCCGCCGACGGA
GCATCGTCAGTTCGCTGAGACAGCTACTGCCGGCCGGATCTAGGCCTTGGCGGCCTTCTT
GGGGGACTTGGCAGGCTTCTTGGGCGACTTGGCGGCGGCGCCGGCCTTCTCGGCCTTCTC
TGCGGACTTCTTGGGGAGCAGCACCGGGTTGATGTTGGGGATGACGCCGCCGTGGGCGAT
GGTGACGCCGGCGAGCAGCCTCCCGAGCTCCTGGTCGTTGCGGATGGCCAGCAGCAGGTG
CCGTGGCACGATGCGGGTCTTCTTGTTGTCCTTGGCCGCGTTCCCCGCCAGCTCCAGCAC
CTGCGTTTTCCACGACGGCGTCGTCAGCGCATGAAACTAGCTGACCGGAGGTGGTAAGAA
GGAAGGAAGGAAGGGTGGTGGGGCGCTTGCCTCGGCGGCGAGGTACTCGAGGACGGCG