Contig Data
morexGenes
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Map Locations of contig_95893 (2565 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_95893

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81360 11 1758 bp MLOC_81360.2 Available Available LOC_Os04g55210.1, FRAME:+3, EVALUE:1e-14, 13104.m05721 protein chloride channel protein, putative, expressed





CDS Structure of MLOC_81360






Contig Sequence (2565 bp)

>contig_95893 2565 assembly3_WGSMorex_rbca.fasta
CACTCGAAAAATAGAAAATGATTTTTCCGTCCAAAGAAAATGAAAACTTCCTTAGCCAAC
ATTGTTTGCAATTCCAAGATGCACCCTTGTGCACAATATGATGTTAGTTTAACAAATTAT
GCCATGAATTTGGCCATAAGATTAATTATTTGAGTCGCTTCTGTTGGAATCCCATGTTCT
GCTTGGTCAATGGGTATGTCACACGGATCACGCATCAAAGACCGTCGGATGATCCCGGAT
CCAACGGCAGCCCTCGCCTCCCAGTTGAAACCCTAGTTTTGTCCTGTGGACATTTTTCCA
ACCCCCGTGTGCAGCCACACACACTCCCTCATCCCTCCCTCCCTCCCAGATCCGATCCAT
TGGCGCCGCCCAGCTCGCCTCGGCGACCGGGAGCCCGAGTTCCTCGGCGAGCCCGTCCCC
ACCGACGAGGACCGTGCCAAGTGGCCGTCGCTGCTACCTTGTCTTCCCTTCCGCCTGTGG
TTCTGGAGCTCGACCCGCCGGCGTCACCATCCTCCTCCGGCCGTCCACGATGGACATACT
CGAGCTCCAGAATACCTCCTTCCCGTCCGCCCAGGAGAAGAAGCGGCGGCCGCCCAAGGA
GCCGCATCGCAAGCCCGATGGCGTCTCGCGCGAGGTACTGCCCTTCGTCACCCTCCTCTG
CGTGTTTGGTTCTTCTCTCGGCGCTAACGCTCGTTGTGCGGATCGAGGTGTACGCGCTCA
CCGGAGGGGTGGGAATGGTGCCGCTCATGCCCACCATTTTCCACAGCGCGAGGGGCCCGG
CCGCAATATTATACGGACCGGCGGCCCTCGGTTGCAAGAAAAACAAATGACGACGGAGAA
TTACTCCCTGGTCTCCCCTTTGCTCCTTCGTTCACACCTTCCGCTAAGCTGGTCGCCGCT
GGTGCGGGGGGGCGGGGGCGACCGTCGTCCGTCCGTCGCCTTCGAGCAAAGCTTGCGGCC
GCGGTTCCGGCTTCATCGCGCGCCGCCCCGAGGTGAGTCACGGTGTCCCTGCTGCTGCGC
CGCCGTCTCGTCTCGTGCCATGCGCCTTGCTTGTGCGGGTGAGCGCCACTTTCTTGCGGG
AATCTTTGGAGTGGGCTGCGGTGGTGGGGTTGTTGTTGCCCCCGTTTGAAGCGCCCGCAT
GCAACAAATCGCTCGCTTCTCGCCGCCGCGGGCTGGACCTCAACGCCCGCCTCTCTTGGT
GCCTGCTCCTGCCGCCTCTTGGGGTTCCGCCGGAGTCCTACACCTCCGCCGTGATCCGGT
CCGGGAGCGCATTCTTGGCCCTCGGCCTGTTGCTATCGTGATGGTCGATGCGTGGCCGCG
CGAGTGACACAGAGTGGCCATGTGAGCTTTTCTTCAGATCTGAGCGAGTTTTCTCTCCCA
TTTCCTGCTCTTCAGATCTGCCGCGACAAGCGCTGCCGAGTAGCCGACGTGCTGGTGAGC
TTTCGGTGTGAATACCAACTTGACTTGCAGTGCTGACTCAAAATTGATACCCCGTCAGGT
TCGAATCGGCGTTCCTGGTCTTCCTATGTTTGAATCTCCTGCTCACCATGTTCGCCACGG
TGCTGACGGTGTACGTGGCGCCCGCGGCGGCTGGCTCTGGCATCCTGGAGGTGAAGGCCT
ACTTGAACGGTGTCGATGCACCAAACATTTTCTGTTTCAAGACACTAGTGGTTAAGGTAG
AGTAGTGAATTCCCTTTCCCTTTCACCCCTGTAGTTTCATGGCATGAATTGTTGGTATGA
TGATGTGCCCTTGCGTTCATGATGGCTGGCACTTGGCACTCACTACTAGCTCACACTTGG
CTTAACTTAAAGCAATAGGTTGCTTGATTGGTTTGTTGGCCTCTCATTTGAGCTTAGTAC
AATAGCAGAGATACTTCTAAGCTATTTGTCAGACATTGTAGTGGGATCTGCAGTTGTTTT
GTTTGTTTATGATTATTCTGCTTTGTTCAACACATGATTTACACACTGAAAAAACTTGTT
ACTGTTGTAGCATTTGAACTCAGATTTCCATACACTACTGTTTGTGCATTTGAGGAAATT
GGCTCCAGAGTGTGTCATCACCAAGGTACTGTTAAATAGAGCATCTGTTATTGGTCGTTC
ACTTGCGTGTCAGATAGTGTACAAATTAATTGTTGTTCTGAGTTGGCGGTCAAACTGACA
CTTTGTTATCATACTAAATCGCATCGGTTGCATTGTATCATCTGGGTAGTCGCAAGCGAG
GACTAGTTGTTCAGACTTAGGGGGTATGTTCTTCTGATTTGTGATGCTAATGGGAGTTCT
GCCCGTAGCATTTGTCAGTTCAGTTGGACTGAATTAGTGATACATAGCACTAAACTTAGG
AAAAGTACATGGTTGACTGGGTGCATAATTAATCTGTGTACTAACGATTGTTTCCTGTCT
CTGATTGATGTTGACGTTCTTTCTGTTCGTTTCATCCACAGTAAGCAAACACGGTGCCAT
CCATGAGCCTCGTTCCGAAAGGACTGCTCCCCTTCGGAGCGCTCCCCTCGAGTGGCGGCA
TCGCGTAGAGGCCGGTGTCCGTGACCGCCTCCCTCGAACTCCATT