morexGenes - Barley RNA-seq Database

Contig contig_95618
Source Contig contig_95618
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_95618 (9215 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_95618

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_81296	3	3271 bp	AK369372	Available	Available	None
MLOC_81297	3	2308 bp	MLOC_81297.1	Available	Available	LOC_Os05g48040.1, FRAME:-2, EVALUE:0.0, 13105.m05094 protein MATE efflux family protein, putative, expressed
CDS Structure of MLOC_81296

CDS Structure of MLOC_81297

Contig Sequence (9215 bp)

>contig_95618 9215 assembly3_WGSMorex_rbca.fasta
TTAAGTTGGTTAAATTGACGACCTAAATACACGTGCCGGACTTATAAACTGAAACGGAGG
GAGTACTAATATACTCCGTCTCCATTCTTCTGGCATGTTGTTTGCCTGAAAAATGAGGTT
AAAAAGCATGGTTAGCCATACTATCACTATGTCCCCAAGGCCTCTCCACACCTCAATGGG
GTTACAACCAGGGCCCATCACCTTTCCTCCTTTCATCCTTTTTAAAGCCTCCTTGACCTC
AGACTCCTAGATCTGCCGCACAAAACGCATGCTGGTATCATCAAAGGAGTCGTCCAGCTC
AATGATACAGCTCTCATTCTCCGCATTGAACAGTTTGTCGAAGTACTCCCGCCATATATG
CTTAATCTCATTGTCCTTCACCAGGAGCTAGTCTGCTCTGTCCTTGATGCATTGGACTTG
GTCAACATCCCTCATCTTCCTCTCTCGGATCTTGGTCATATTATAGATGTCTCTTTCGCC
TTGCTTTGTGTCTAACCGCCGGTAGAGGTCCTCATACGCTCGACTCCTTTCTTCACTCAC
ATCTCACTTTGCGGACTTCCTCGCCAACTTGTACTTCTCAATGTTGTTTGCACTCCTATC
TAGGTATAGGCGTGAGAAACAATCTTTCTTCTCCTTAATAGCCTTCTGGACATCATCATT
CCATCACTAGGTATCTTTAGCTTCGCTTCTACTTCCCCTCGACACTGCAAACTCCTTTGA
GACCACCTTATGAATGCAGGTCGCCATCTTCATCCACTTATTGTCTGCATCACCTCCTTC
CTTCCAAGGGCCTTCCTTAATGAAGCTCTCCTTGAACGACTTTGGCTCTTGCTGGGCACG
AATCCAAAAGCGGAAGCCAGCGACCACAAGCTTATGTTGAGGGACAACACTCTCTTCAGG
TATCACCTTACAATCTAGGCACGCACGTCTGTATTCTCTTCTCGAGAGGATGAAATCAAT
CTGGCTATTAAAAGTCACTAGATGTGATTCTCTTTTTAAAGAGGGTGTTAGCTACGATTT
TTTTTTTGAGGGAGACGGTGTGTGGGGAATCTGCTAGAGTTGCTCTTATAGTTTTGTCTT
CAAGTGATACTTCAAATTTGATCAAGTTTATGTATATGAAGGGGAAAAACCTGCACTGCC
CATTACAAGAATCTATTACATTTAATTCTGTTTGCAGTAGTTGAAGCATCATTAGCATTA
TTTACATATTTGCGCTTCGGGGATGTTTTCTGCCAGCCCTACCGTCAAGTGAACGAGAAA
ATGACCCCATTTACTGTGTCTCTCCCCAAGTACACCTCGCTGATCCCCCCCCCCTCGCGC
GCATTTCTCTTTGGTCTCCAAGTCATTCTGTCGGTTATATCCATTAGAAATAATTCCCCA
TAGATGTACCATTGCTCCTGTAGGCTCGGATAGCTTTCTTTTTTGTGCTTTCTCTTTTGC
TAGATGATGATCTTATTGGTTCCAAAAGAACATGAAGATCTTATGGTTAAAGATTTAACA
ATAACAGAAGTTATTGAATTAGAGGTTAGATGTTTTTCTTTCTCGAGAATTTGTTATGTA
TGATGGATTGACAGGTATGATGATTACAACCTCGAGGTTAGAAGATTTGATGTAATGTAT
GAAATCAAGTTAAAAATAACAAGCCAGTACACAACTCCTACTTGCATGTCCTAGCATGGA
ATCCCTGTCTCTGTTCGATTTCATCACTAGCCTACTCATAAGAATGTGTGCAATTTTTGT
TTTTAGGTACTTGATCATTCTGGATGACGTTTGGCGAGCAGCTGCATGGGATCAGCTAAA
TGTAGCTATTCCTCGTAATAATAATCAGGGCAGCATAATAATTACTACACGCAGTCAGGA
GGTAGCGGAAAATTGCTGCACCTCTTCCAATATCTATAAAATGAATCGGTTAGACAAGGG
TGATTCAGAGAAGCTATTCTTCAAGACAGTATTTAATCCAGGGCAATGCCCGATTGATCT
GCTGGAAGTCTCCAAGGTCATATTGAGAAGGTGCAACGGTCTACCTCTAGCTATAGTGAG
CATAGGACGAATGCTAGCCCGGAGGCAAAACCAGACACCAGCAGAATGGCAAACAGTATG
TAATAGGCTGGGTTCTGAACTAGAGACAAACCCCACTTTGGAGGGAATGAGACGGATACT
TTCTCTCAGCTACAGTGATCTGCCGTACCATCTGAAAGCATGTTTCTTATACCTGTGTGC
TTTCCGTGAGGATTCTGAGATCAGAATAGGCTCTCTGATTAGACGGTGGGCGGCCGAAGG
CTTGATCATTGGAATGTATGACCGCAGTTTGGAGGAGATTGCTCAGATTTATTTGGACGA
GTTTGTCAGTAGAAGCATTGTCATCCCTGAAAAGTTTGGCTGCAGCGGCAAGATTAAGAG
TTGTAAAGTCCACGACATGATGCTAGAAGTTATCATCGCCAAATCTGTCAAGGAAAATTT
CATCTCGTTCCTAGGGAGCGGTCAATACAACACAACAGCAGGCCATGACAAGGTACGACG
GCTCTTCATCCATACTGGTGGCACCAAGGAGAAGATAACTTTTCCCAGCAAGAACATAGT
CCATACCCGTTCACTGACAATTCTGGACAGCACTGTGAAACCTGTACCTATCAAGTTTTC
TGATTTGAAACTTATAAGGGTTTTAGATCTTGAAGGATGTAGATGGTTAAGCGATAAAAA
CCTCAAGGAGATTTGCAAACTGTCTCTGCTGAGATACCTCAGCCTTAGAAATACTGCCAT
ACCCCAACTACCCAATTCAGTAGGAAAACTTAAAGAATTGGTGACACTGGATGTGAGGGA
AACTTCTGTCGTTGAATTTCCGAAAGGCATTACTCAGCTCCAGAATCTGAATCATCTACT
TGTAGGCAGTTATGCCTATTACACGAGGACACGAAGTGTCAAGCATTTTGGGTGGAGTGA
AGGAGCGAAGGTGCCACTTGGATTAGGGAATATGGGTGCCCTCCAGAGAATCTCTCATGC
AGACATTTCTACAGAGAAAAGCTCGCGTGCAATGCGTGAGCTGGGAAAATTGTGCCAGTT
GACCAGACTTTGTGTAGTCAACATGAAGGAAGCAAAGTTTTGGAAACCCTTTGCTGAGTC
TTTGGATGAGCTTAGCAACTCTCTTCGCTATCTAATGGTTGTGGACGGTTCACTGGAAGG
CGAGGAGCTGGAATTCTTAGTACGCCTGAAGAATCCCCCTCTGTTTTTGCAGAGCCTGCA
TTTGAAGGGACGGCTAACTAAGCTGCCTGACTGGGTTTCATCGCTCAATAACTTGGCCAG
TCTGTCGCTTAGAGAAACTTACCACTTGACTGAGGCATCCTTTAAGGTTCTAGGGAAACT
CCCCAGTCTTGTTTCTCTCAAGCTATACTGCTGGGGATATGCTGGGAGTGCCTTACGTTT
TGAAGAGGACATGTTTCTCCAACTGAAGCAATTGGTCGTGGATAATTTGGAAAATCTCGA
GAAACTCAGCTTCCGTGGGGGTGCACGTAATCTTGAGAGGCTCACATTGGCCTTCCTGAG
GGTGCCCAGTAGAGGCATTCATGGCATTGGAAAAGAAAACCTGCGTCATCTAAGAGAAGT
TGAGTTCTTCGGCGTCATTGTAGAGTCTATCTTTGACCAGGTGTTTGAGGCGGCCAAAGA
ATATCCAAATCATCTGAAAGTCACCAGGGAGGATCGACCTACTACGGAAGCTCCACAAGG
ACCCGCCCAGCAAGTGGACAACACCGGCCCAGGTTTGCATTTGCTTATTTCTTCTTCAGA
CCCTATATTTTCGTTTTAACAACAGCCTTCTCCTGGCCTCAATTTTTTCACTCATTCTGT
GCCAGTTATGTAGGGACGGGGAGCAGTGAGCAGGAGCCAACCGACCAGCAGGTGGATATG
CCTGCACTACGATGCGAAGATGAAGATGACGAGGCAACACCAGCTTGGCGTGTGCCGCCT
TCTACGTGTCCTCACGCTTATATCTTGTGATGTGTATAACTACATGCTCTGTATTTTCTG
AACTTAGGTTGAACGATCGATTGTTGCGCCAGGTTTTTCGTCCCATGGTTGTACTATTAC
AAAGTGGTAGTTCAACTAGTGGGTTTTCCTGGCGCGCATCGAACTTGAATATCTATTTTG
TTTTGCCTTTATAGTGCACTGTTTTCTCTGTATTGGTAATGAAAATTGGGTGTTGCCTAT
AATACTTGTGAAGTTCAGAAGGAGTAGATACAAAGCAGTTAAACTGCAGTGCACTGCAAG
AAGGCAAGATATGTGTTTTGAGGTAGAAGGCTATAAGTAGGCTGTTGATAGCGTGTCCAG
TTAATTACTTTCTTAAAGTCGACACGAAGATCGATCGGCGTGCTTTCATCGTAAGCGGTG
GCAGGCTGTAGGGGTCTGCAAATTCCATCTGACCCTTTTTTATAGTTCTACCAATTGAAC
TAAAATTTCAAAAGCCACATCATTGCTGAAATTTTAGTTCATTTGACTGAACTAGGGAGG
ACTGGTAACCTGATGACACTTCACATATTATCAAAATTCTGAAAGTTCCCTGAGACATCC
AGGAGCGATCCACGCCTGGCACAAAGGCCTTTACTGCTTCTGTTCAGTTTGTTTTGGTCT
TTTGAACAGTCCAGATGGAGCCAATGACACACGTGGCAACTCATCAGCGGTCCACAGAAC
ATCCATAGTACTCTCTCCGTTCCTAAATATAAGTCTTTGAAGAGATTTCACTAGTATACT
ACGAACGAAACAAAATGAATGAATCTACACTCTAAAGAATGACTATATATATATATATAT
ATATATATAGCTTCCTAATGAAACATCTAAAAAGACTTCTATTTAGGAACGGAGGTAGTA
GTTTTCTGTGCGCTCATCAACCAGTCACGGAATATGAGATTCAGTTCAGAATTTGATACT
CCCTCTGATCCGAAATAAATGTCATGGTTTTAGCTCAAATTTAAACTAAAACTACGTCAC
TTATTTTGTATCAGATGGAGTACATGATACTGCTTGTGCCAAACAAGTCGGCTAGCCAGG
GCAAACACCTAAGCATGGTCTGGCCAATCTAATTTGCAAGGAGATTAGAACGAACGTTTG
CTTCCTCATAAACCTCGAATCTGCAAACACAAACTTGCAGTAAGATAAACACAGCCGTCC
ATACTCAATTTTGAATTAAAATTCGGAACCTTAAGAAAAAGACATATCCTAAGAATGTCT
ATGGCAATGTCATCGCTTTTATTTATTTTTAAGAAAGTTGGTAAGTAATCTGCTTTAGGA
TCCGTTAGCAACATCTTTGCAGAAGATGGCTACCGAAAGTGCGCCCGTGTTACTTCCACC
CATCTTCCCAACCTCAACAATATTGCAACATTACAACTACGGGCACCAGTTAGTTCTTGA
TTTTTTTTCCGATTCTTCAGCAAACTCACCTCTCTATACATTCACGTCTCTCAAAGCAAA
AAAATGAGGAATTCCACTGGATTGGAGACTGTCCTCTACAGCCACAAGATTAAGCTGCCG
TGTCATCCGCTTCAAGTTCGGGTCAAGGGATCGAAAAAATCGCGACAAAATTACGCAGCG
GCCGTTACATCAGACATCAAAGGCTCCTTGTCCGCTGGGGTTTCGCCGAATACTCGCTCC
CTCGCATTGTCAGACTGCAAAACCAACAACAGCTCAGTGCCACATAAATCAGGTTTTCCC
TTTCGTGTATGATCAACACTGCTGGTATGGATAAACTGCAAGGTTTTGAGATTAAAGAAC
AAACCATCTTTTGCCAGTTGCTGAAGAACACTATGCCGGCGAGGAGTAGGAATTGCATTA
TGGAGCCGCAGGAAATGCCCATCCAAAGCCCTTTTCCTCCCATCTTCAGAACAAACCCGA
GAAGGAGGGACATTGGAATCCCAAACAGATAGAACGAGCCGAGGTTAACATAGGCACCCA
GGTGCTGCGACCCACAGCCTCGAGCGATACCTGAATGATTAACACACAGTGTATGTTAGT
ACTAGACATGAATACATCTGGCGCTAAAACTATGTAGAAAAAACAGAAAGAGCAGCTTCT
TCTCTATTGGAGTTTAGTGGTGTGATGTCATTATACACGAGGATCTTGCAAGTGTCTAAA
TTAAGCTATGCTGGAAATGCCAGGCAAGAGCATATGTTTGAGTGGATTCGGTTCAATATT
CTGGCCTGTTCAGAACTGTCGACAAGCACGATCTTACACAAATAGTGAAATAGACCAGTC
AAGCAAACAACAGTTCCACTAGCTAGAAGAGAGGTGCAGGCGATTGCATACTTAGTGAGG
TGGCGCCCACTTAAGATTACATCCCAGCCAGATGTGTGTGGATGCAAACACCGGCATCCA
TGTTCACATAAGAGCACATGTTTGAAAGAACAAACAGGTAACTCCCCAAGTAACAATGTC
GGCTTCCACAACACAAAATAGCATTAGTATAGTGAAACATTAATAAATCTAATAAGTGGC
ACGTTACCTGGTAATGTCTTTGCGAGATCAGCATGACTCACAAATAATAGTATCACTTGC
TACCTAGCAAATGCTTATTACCAAAATGGATAAAAGCTACATACTGAATTATGGAAATCA
AACTACAGGGCAAAGATATAAATATCATAGTATGGTGTCATGGCTGGAAACAAATATAGC
TTACGGCCGCCGAAATCGTTATAACATCACTCTTTTGAAGGGACAGTAAAATTGACAGAT
GAATTAGTTAGAAAATTTTAACCTGAGAGAACTCCTTGTAGGCTATCAGCAGCAACTGAG
ATGCAGATGAAGGGAACCATTGCATTGACGTAATCAACAACCTCCTTATCACTGCTGTAT
GCATAGCCCAAGATGTGCTGGGATGCTAACAGTGCCCCAGTGATGAGAACCGCCTCAGTC
ACAGCAATAGACATGACAACGCGGACAGCCAGTCGAGCACCTTCAGGATTCCCGGCACCT
AATTCATTTGCTACACGAGTGCTGCCCATTGAATAAAAACACAGAATGCCGTCATCAAAT
TATAATTCCGTCCAAAAAAGAAGTAATATCTAGAAGTGTGTTGAGCTTCTACTTACCTTC
CAGCAGCACCAATCCCATATGCTATAGTATACATCAATGTGATTGTTGTCATGCTGTACA
AAAAGACGTGCGTGAATATGATGCAAATATTACCATCAGTGCATATTACCTTACATGGGA
AAATTCTTACCATGTAGACAGAACTGAAGTTTGCAGCTCTGGATTGGGTAGAAGTCCAGA
CAGAAGAATAATGACCTCAAATGACCACCATTCAAAACTGGAAGATTCACACGGAAACTC
ATTAGCTCAATAGGGAAAAGTAACGCGACACATGGCCATTCTGAATCACACTGCCGAGCT
TACCATAACATTAGTGCAGACGGCAGAGCTAGGCGCATGAACACACCCACTCCACTGAAA
GCATCGAGTGTAGGAGGCGAGAATGTCTCCTTACAAGAGTTTGAGCATCCGATGTACGCA
ACAAGCATGAACACGTTCAACCAGTATGATACACTTATCGCCAAAGCGGCTCCAATGTAC
CCAAGGCTGGTCTTGAACACTAATAACCAGCAAACAGGAATGTGGAGGAGCAATGTTGCA
ATGGAGGACCAAAGCATAGGGATTATCAGACTCTGAGACTGTAAGAACTTTGTTAGGGGC
TGGCTGACAGCATATGCAAAGAGGGCCGGAATCAACCACATTATGTATCTTCCGGCTTCA
TGCGAGATCACCGGGTCCTGGCCTATGAGGGTCAGGAGTTTCCCCATGAATACCCAGAGA
AGTGAGATTGGAATGCTGACAGCCGTCAGGGTGACCATAGCTCTGTAAGTTTGCACTCCC
AATCTGCCATACTGCTCAGCCCCGTAAGCTTGACCACACAGAGTTTCTAAGCCGCTTGCC
ATTCCAATCTGTTATACAAAGAGTATTCAGATTACTTGTGTAAAAAATGTGCAACTCAAA
GAAAACAGTTTTGTTAACACTGTTCAGAATATTAAACAATGATGTGCAGTAATAGCATGT
AGTCTTAAGTCCACACATGGCAAGACTGCTACATCAAAATACCAAAGTGTTCCTGAACTG
TGAACACGCCAGATAACAGAGTTACTCTTGAAAGTTTTGATGGAACAACATAGTTAGTTC
CATTCCCGCATTAACCATTCGGTGGAGCTTTATCCCAGCTAATGAAAAAATATAAGAGAA
AAGACTAAACCCCTCCTCATTCCTTTATAATAATGGCTACTACTTGCAATGACAATATGC
TTTTTCTCTTGAGTTGGCAACATGTGATGTTTGAATAATTTCATCATCGCCGCACCATGG
CGTGGTAATAAACTGATGTTACCAGTAGCAGCCACTGTTCAACGGCAGAACAAACACAAG
TATATATGCTATGGTAAATTACTTTTTAAGGTATAAAGGAAAGAATGCAGTGCTTGCCTA
GAAAAACAGAGAGAATAGCTTTGCCGCTAGTGAGGTCACTTTAAACTTTACAGTAAGGTG
TTGGTGTTCAACTGGAGATTGACCACCTAGGCCCATACACTGAATGAGCACAGCACCAGA
AACCCCCAAACTAAACCTACGGTGGACTCGTACACAGAGTTTGTAAACCGCTTGCCGTTC
CAATCTGCCATGCAAAGCAGAGCGTTCGGATTACTCGTGTAAAACATATGTGTGCAACTC
AAAGAGAACAGTTTTATTTAAAACAGTTGAGAATTGAACAAATGTGAGCTTTGCATAATT
TCATTTATCGTGCTATGCCGTGGTAAACTGGTACTAATACACTGATGCTGTTACCAGTGG
CTACCCATGTTCAGCGGCAGGACGCACACAAGTTTGTTACTACTATATTTTATACTAATA
AAGAAAATAACTTTGTATAGTTGGCTAGAGAAAAAGAGAGGATGATTTTGTTGCTAGTGA
GGTCGGTCACTTTACACTTTACAGCAATGTGTTTGTGTTCAACTCGAGATTGGCCACCTA
GGCCGGGCTCATACAGTGAACTGAGTTGGGCACCACGACACCCCAAATTACCAAATCTAC
GGCGGACTTGTACCAAGTACCAACTGCTTGTAGCCTCCAGATCGTGCAATCGCAAGTGCG
GGACGCTTGTTGGTTGGTAAGCCGGCCGGCAAATCAATAGGTTGCGACAGGGGCAATGCG
GCGATCAATTTAAGAGAGAGAGAGAGAGGGGGGGG