Map Locations of contig_95296 (3581 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_95296

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81243 1 1061 bp MLOC_81243.1 Available Available LOC_Os07g11510.1, FRAME:-1, EVALUE:5e-22, 13107.m01188 protein RAL6 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed





CDS Structure of MLOC_81243






Contig Sequence (3581 bp)

>contig_95296 3581 assembly3_WGSMorex_rbca.fasta
GCATCGAAATTTTGTTGCATAGGAGGAAAAATGTTGCATGTGGATCCAACGGTGCAGACG
CGCGGGGGTTAGTGGATCCTGCGGCCAGCGCGCGGCCGGCCGAAAGTTTGAACCGGCGCG
CCGGCGCAGATCTCTCCCTAAATAAAAACGAAAACAAAAAACAAAAGCAAAATACAAGTA
AGGAAGGAAGGAAGGGCGGATGTACGGAAAAAGTTCTAGTCTGGCCGTCGTCGTCGGTAG
GTCCCCATATCCAGTGAGTCAGTCAGGATCAGGATCATGGTCAGGGCCATGTTGGCTTCC
TCCAGCCTCGCCGCCCCTTCTCCGGCCTCCCTTTAGTTCCACCTGCTCCGCCGCCCAGAC
CTAGTCCTCCTCCCATGCCTCCGAATCTCTCTCCACCTCCGCCTCCGCCTCAGAGCCCAA
GCCGCACCCTCCCCTTCCCCTTTCCCTTCCCCCGACCCCCCCAAGCCCACGACTCCTTCG
CCGGCTAGTCCGACAGACAACAAGACAACAAGGATGCTGAGGATGATTCTGATTCTCATT
CAGGAGGAGGAGGTAGGTCAGGTGGCATAATAATTTCTTTCTTTCTTTTGTTCATCCGTA
GTTGCTGGGTCAATAGGAAGCGGTCTTGCTTCACAGTCCGAGGTCATGTTCTTGGGTTGG
CGCCGCTCTAAAATCATCGCCCTTGACGTACGTCTTCTGGTCTGGCGGCTTCCCTCATCA
ATCCTGATAAGATATTCCTCGGAAGCGATTCTGCTCCACATCTCGTGGCCCTAGGACGGC
GCCTCTTGGTAATCATCGGCATTACGTACGTCTATAAAAGGATTAATGTCATCTGCACTT
CATTCTCTTCCATGATTATAGTACCATAATACCCAGGATACTTAGGATAGTTGTCATCAT
CCTCTTCTGCTTCATTCTCTTTTATTAGAACCCCTCTTTCTTCGTGCTTGGTCAAAGAAT
TATAGTCCGACATAAACCGGACGTAAATAGGTGGGCGTGAGTTTGTTTTGAGCTAGAGTA
AGTATTACGATTCTTACACACATCACATGAACAATACATAAAACCATCCCGCTTGTTTGG
GTCAGCCACACCCAAAAAACTATACATGTCATTAATGAACTGGGGAGAGCGTCGGTCATC
GTACTTCTATTGTCGGTTCATCTTCATTACACAACATCGAAAATACCAAATTAATACAAC
TTCATACATACTTATTCTCATAAAACAACATAGAACTATCTAGCTAAAAACATTTAATGC
AACAACAAATGTGATTTTTATTAATAGCATATTTTTTAATTTTTCTAAGCCTCTTTATTA
AATCGCATTTGTTGAAAATCACTTGGAGAGATGGGGTGCCTCAAATTTTGACAAGTCTTG
GCAAAAAATGGAGGATGAGCTCGAGCTAAGGGGAAGAACAGAGAGGGGAATAAAGAGAAC
AGAGAAATGGGCTCGGGCTGGACGAAGGGTTTATATTGGAAAAGATTTAGTCCCACTTGG
TTATAGAAACCGGACAAAAGGTCTAACTATAGTCCCGGTTTGTAAGACAAACCGGGACTA
CAACGGATCGCGGGGGCCCTAACCTGGCAGCGGTGTGCCACCACCCCTTTGGTCCTGGTT
TGTATCACAAACCGAGACTAAAGGTCCCAAATGAACTGGGACTAATGATGCCCGTGTCCC
CGACCGCTCCTAGGCGATGAAACCGGGACTAATGGTCACATTAGTCCCGGGCCAAGACCA
AGCCGAGACTAAAGGGACAAATCGTAAGGTATGTTTTCTAGTAGTGAGCTCGACCGTTGT
CGAGGCTAGGCTGTAGATTGCCCAGAGTGTTCGAACCGTGTTCTTGAGATGTTTTTCGTA
GGCACAAAACCAATCTCCGTCAAAGGTCTTGCATGCGTCGGCCAATATCCTTGCACAGCC
GAAGGACACGGCTGGTTGCGGGCGTCCTGACCTAGGTAACGCGGCGGTTGTGTCCAGGTG
ATGCCGATCGACGTGCCCAGAGGCGCCATTAGATGAAGGAGAGGAATCGTTGAAGTTACC
AGGATATATTCTATCGGGGTGCCGTAGGGAGCAGAAGAGTGGGGCGTGGTTGTCAGGTGG
CTGTATGCTATTACTTTAGTTGTTTGTGCGGGCTCTAGAACATCTATCTGAGATAATGTT
GTTATCTATGAGTAGGAAAATTAAATTAAGTTCAGGTTCATACATGACGCATGCGTCGCA
TAGGCAGATACACCATTATTTCATTTTATTCATCTTGTGCGCGCACACACACACCACACA
AATTATTAAAAAGCATAATAATCGCTTGACTAGGTGTCCGTAGACGCTGACCAGTAGCAG
ACCCCTCTGGTGCCTGCCGCCTCGTTGGGAATGGGGACATTGCAGAGCGCAGGCACGCCT
GCAACCAAGAGCTTCATCACATCCTTCTGGCAACCCGGGAACACCTCCTCCGGTCCGCCC
CCCACGCCGAGCGCCGCATACACGCTGCGCAGCATGCTGCCGAGGTCGCCGCACCTGCAC
CACTCGTTGCTGATGTTGGCCACCTCCTGGCAGCAGTCTCTTAGGACATCCTCGGGCACC
CGGTTGCCCACACACTCGAGCTTCACCAATGCTCGGCAGCGCGTGAGCGGGCTCACCTTG
TGGCCCATCTCAGGATCACACCACATCCAAGGGCCACTGTTATCACTCCGTGCGCCCGTC
ATTGGAGTCACCATGAGCATGCATAGCAGGAGCACCAACAACATGCTCTTCATCCACATT
GCTCCCATTCCCATCTACTACTATCTTAATCAGTTGCTTATATCGATCGGTAGCTACACT
CTTACTATCTTAATCAGTTGCTTATATATAGCTAGAGAAAGGCTTGTACTGCCTGGTGCC
AATGGCATTTTCTTGCACGTCGCCCTTCTTAGTGTCGTGAGGTATTTGGAATGCACTCAA
ACATTGTGACTACAACCCATAGCTTGTTAAACTCACTACTAAAAAGTTAGGATGCATGGT
TACCATATCGACAAAATTAGCTGCAGCCTTTGTCCATATATATAAAATAAAACAGCTTTC
CGAGTGTCTTGTGGGCTTGCATGAGTGTCTTGTGGGCTTTGTACTGTATTTATTATAGAT
GTTGACACGTTACAATTAACTTTCTTTCAGCTTTCTAAAGTGTCGTGTCATGAGGATATG
CAATCGGAAGCTTTCCGAGTGTTGAGTGAACCCCACAATTTGTTGCTGGATCCAAAATTA
GCAATGCGTGAGGAAAGGTATACATATCCACCTTTGCGTGCGGAAAACATTAGTATGTCA
CATTTCTTTACCCACAAGATAAAGTATATTTTGTGTACAGGGCGGGGACAGAAATTGTTT
CATATCAAATAGTATATGAGATATTTTTATTTAATTCTATGTCACATTTCTTTCCGCCCA
AGATTAAGTTCATTCCGGTATCATGGGAACAAACACTAGTAGAAAACAAGGCTTTGGTTC
GGGCCTGACCGCCCATTAGTCCCGGTTCTTAACGAACCGGGACCCATGGGGGGCATTAGA
CCTGGTTCATGAGCTCAGGGGGGCGGCCGGGGCCTCGTGGG