morexGenes - Barley RNA-seq Database

Contig contig_95060
Source Contig contig_95060
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_95060 (8477 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_95060

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_81208	3	2010 bp	MLOC_81208.1	Available	Available	LOC_Os07g37580.1, FRAME:-2, EVALUE:0.0, 13107.m03868 protein diacylglycerol kinase, putative, expressed
CDS Structure of MLOC_81208

Contig Sequence (8477 bp)

>contig_95060 8477 assembly3_WGSMorex_rbca.fasta
TGTTCATGGGGCTGCAATGATGTGGGAATCAGAAACTTTATGGGAGCTGATGACATGTTG
TGTTATTTTACATAATATGATCGTCGAGGATGAGGGTGNNNNNNNNNNNNNNNNNNNNNN
NTTTGAAGCACGTGGAGAACAAGTTGAAATCTATGAAGATCAAGATGCAGTTCAGCTTAT
GAACTTCCTGCACATGCATCAGAATCTCCGAGATCATCATGTACATGCGCAACTACTCAA
TGATCCGGTGGAGCATGTGTGGACCCACAGTGGAAAACAAAAAGCAGACGATTGAATGTG
CACTTCAAATAAATTTGATGTAAACACTTCTTATATTTGATACCAATATTTGTTTTATGT
ACGACATTTAGTTTATCTGATTGACGTGTATGATTTTGCATGGATTTGAGAGTCCGGATA
TGAGATATATGGATGCATAGAACAAAATATGAGGAGCCGTTCGGATGCGTCTGCGGACAT
GCCAACCGGGTCCGCAACTGTTTGAGTTTGAGGGGCTGGATTTGCAAGGTCCGACACGAG
ATGCACTCAAGACGTTTGGGCGAGAGGGGGTGTTTGGGGAGTCCCGTTGTAGATGCACCA
ACAGTGACTAACGTGTTGTGGTGGAAAATTATGGTGATTTCAGGACAGTCAAACTTCCTT
TCTAGTACAGATCAGCGGAGAACAGTACTCATCAGACCACGCTTTTTTTTTTGTGTGTCT
TGGTCAATGCCAACGAGTACAACCAGAGTGTGACCCATCAACTCAAAAAAATATCCCTTT
CCTTCACTAGTCAGATTCTCCTAAGGTTTTATACTTTTGCCTTTTGAGGCTCAGTTCTGA
CTGAGCTCTGACGCCATCGGTTATATCCAGGATTCAGACAAACATCAACAGCCTCTTGCA
TTTCTGTGTGAGTATTTACATACAATATGTGCTGAGACGCAACCATGTGAGGGGTAAGAA
GAGGGGAACAAGGGAGAAATAATTCATATCATCTTGGGGAGAAGATGGTGGCCAACCCCT
GATCCACCGTCAGTTGGATAGGGGGGCCATACGCCATTAGATGCTCCGGCTCTTCCTTGG
TTTGGGATCTGTCGCCTCTCGCGAGAACCTCTCCGTCTGAGTCGATGATGCCGCCTATGG
TGCTGCTGCCGACGCGCAGGCCCGGCTCGATCCGGAGAGCCTTCACCTACAGATGCAGAG
ATGATGACAATTCAGTAGATGCATGACCATGCATGTTTGGAGTATACGTATTTCTTAGAC
AGTGGACTCTGGGAGCTCATGGGGCTAGAAACATGCCTTGAAGTACTCCACATAGGGCGA
TTCGATGTAGCTACCATCCTTCATCCGAAGCAAGAGCCCGAGTGCAACCGACCATGGGCA
ATCCTTGATTATAGCTGCGTCCAAGTAGCCATCTGCAAACTGCACGGTGGTAAAGGATAA
TTAATTAGGCTATGGAGCCAAGATTGACAATGCCAATGACTGATCGTCAGTTTTGTATGT
GTGAGAGTATTTTCAGCCTTCACCACATCAAAGACGAAATATGAAGAAATAGAGCAAAAT
GGAGTGAAATTAACCTGTGCTTGTGGCGCTATCATTACACCTTCACTAGCAAAAGCAATA
TTGCTGATCCAAACGTTAACAAACGGACCCTTCAATGATCTCCATTCAAGATCAGGGTCG
TCGGTTGAAGGACCTGAATAGGTACATGTTTCATTATTATGAACATTTGTTATGTCTCCT
TCGACGGCATTGCTAGCCCCATTTGATTTACAACTAATAGTTTGCTCCACAGGATCACCA
AATCCTTCATATCCTGGGGCAGGAACAAAAAGAATACGCCCATTGTACCGTCGCAAGTTC
ACCGCACGTAGAAGGGACTGAAACAAAGTCAGAGCAAAGAACGAATTTACTACATCAATA
TTTGAAAGACACTTCCACCGCCTCTGTTAGCACTCGAGTATTAAGAACCATATTATATAG
TGATGTGTTGTATAGAGGCTTATTTTAGGGTATGAACCATACATAAAAGTCGATGCGAGC
GCTTCCCATCCACCTAAACTTTTCTGACTCAATATCAATATCAGCTACCAAACCTGCAGT
TCATAAATCATTTTCAGGTTTGTGAAATATATATATTGCCATAAAGCTTAAGTGACAGAA
GAAGCTCTGAGAAGGATGGCCAGTGTTATCAACTGTAGTTTGGAAAAAGGCAGCATCAAA
CTAATACAATGCATACCCCATGTAAGCATCATGACACTGAAAAACTTTGTCTTTCCCTGC
ACAACAGAAGTGACATCGAGGGCACGTCTGTGACCTGTGTTCCGGGAAGGTTGTATCAGC
CTTTGTTCGTACACATGAAAATGTAGATTGTTTTGGAGGATACATAACATGGTTGCATAA
ATGAGGTGTGACGAAGATCAAGGAAGAACATACTACCTCTGATGATTGCAAACACAGCAT
TTGACATAGAGAAGGGTTCACCAGCAGAGTGCAATAGACCTTGTACCATTCCATTTCCAG
TACCTGTGGTACATGTAATAACGTGTAAAACATGTGCTGAGCATACTAATGACATTCAAG
TACACAGATGCTTCACCGGGGAAAAACAAAAACCACAAGTTACAGACTTAAAGCCATTCC
TTAGTGGGAACATAAGCTATTCATGATTCTAATGTTTTTAGAAGAAAAAAAAGAATATTA
CAGTGATAAACGGCTGTAACGTATAGTACGGCTCACCAACGTGCAACAATGCAGCACTAT
GATAAGGATATTGCAATGATCATATACCTGCTGGAATGATCCCTAGTGGCACTTTTATTG
CTTTGTCCCAATCATCTCTTTGCAGCAGACCATTAACAACCTACAGTCAACACAAAATAT
ATTCAAACCAAATAGAGCATACAAGCAAATAGATTAAACCAGTTTAAAAGATTATGAATG
AGATCTGAAGATACTGAACAGAGTGTATCTTCCAGCAGGTCTCATTTGAGAATAACATAT
TTTGCTAACCTCTACAAGGATACCATCTCCACTAACACAAATGATCCCATCATACTTCCT
AAGATCCAGTGAACCAGCAATTTCTTGAGCATGAAGACGGTAATTGGTTTCTGAGGACGT
TTCACGCATAAAATTTAGCATAGCCAAAAAAACAGAAGAGGGGCACCACATCTATCTTTT
CAAAAGTAGACAATTTATAAACATTGATCACAACCTTGCATGGTGTAATGGATGTCAGCA
GCTTCAATAAGAGGCAGAACTTCGGTTTGGAAAATCTTCCGTCCACCTCTCTTCCCACCG
TAAGGGTTCACTATGAAGAACAATCTCTTCGGTCGACCTATTATCCAATGCCATATAGTG
CAAGGAACAGATCAGCATTTCTTGACAGTTAATGTCCTACATGCTTGTGTTCAGAAGTGT
AAACAATCGCAAAGTAAGACCAAGCAAACTAGAGCTGATACTACACAAAGCCCGGAAGAA
CAGGAAAGAAAAATCCTTGGGTGTTTGGATCAATTCTACTGAATTATGGAAATACTCGAA
AACATAGAATTGGTTTCGCATTTATTTTTTGGGAATGCCTAGGGCTCAATCAATTGTCTC
CTGGAAAAAACAATAGAGAAAAAAAAACTACCAAAAAACTAGAAAAATAAAATTTTGCAC
GAATCTCCGCGCAGAATCAGACGGCTATAGCATGGATTGAGCCATATCTATTTCTCACTC
AATTGAGAAATAGCAAACCCGTTATTTTCTTTGTTGAAGTCAGATGGAACACTCCAAAGC
ATTAATGGCGAAATTGACATTGACAAGAGCACTTCATCAAAGTAGAAAATGACAGGCCTA
TAAAAATATCTCCAACAATAAATCAGGAATGAATTAAGAAGGGCGTCGTGTAGGAGCAGC
ATGATTCCCGGGCCTCAGGAGAAGAAGCCACTACAAGAATGGAGTTGCCCAATCATGACG
GCTTGACCAAATCATGTAAAAGAGGTGCCCAGGACACGCAACCTCCGTACAAACAGCAAG
GAAGAGGGTTCTCCGAGCGTTCCAATCCAGAATTCATTTCTTGAACGTTCGGTTAACCGA
AACGGGTTGAGCCGCTGGGTTTGGGCTGTTTCCTGGCTATCTTTAACAGTCATTTCCTGG
TTCTAACCAGGTCAACGGATTCCACCCAGCCCGCAGCGCAACCTCATCAAGTAAAATTAA
GCACGAGCCCGATTCCTCCGACCATAACAGAGAAGGAAATTTTCAAGTATCCAAATCGCA
CCGAGAGTCGGCCCGAAAGAGCAGCCACGAGATCACCGAATCAATACATTTAAACTGAAC
AAAAAAAGCAGAGGATCAGAGAATTAAATGGTGATTACCAAGCGAGGCGAAGCGATCTCT
GATGGCGTGCCCCCACCTCTCCGCGGCCTCCTCGCTCTCCATCTCCACCGCCACCTCCCC
TCTCCTCCTGTCCCCTGCACCTCCGCCGCAGCCCGGCGGCGACGGCGGCCTCCCAGCGCC
CGTCACGTCCCCCCTCGTAAAGGTCGCGAGTTTGAGAGCCCTGCCCTCCACCTGGAACCC
CAGCACGTCGGACTCCAGCTCCAGCTTCCGCCTTCCACCGCTGTCGCGGCCGGCGCCGGT
GGGGCGCCACGCCAGCTCGGCGCTGGAGAGCGTGGCCTCCGCCGCAGAGCCGTTGACCCG
CACGGGCTCCACCAGGGTCTCCGCCTGGGGCTCCGGTGGGACTCGCGCTCCGGCCTGCGG
GTCGGCCATGGACTGCGACGAGACGAGACGAGACGGAGGAGCTTCAGCTGGGAAGTATCG
ATGTGGTTGGGGCCTTTGGAGCGAGCGAGCGAGCGCATGGAGCTTGGTAGAAGAAGGCGA
CGTGGTTATGGTTTTTCCTCCAATATAGACCAGACTCACCTGGTCAAATAGTTGGCGACC
CTAAAATTTGGAAAATATTTTGGGTTTATTCATGAGTTGCCAAAATGATAAAAGAAACAC
AAACTAGAATGAGCAAAGAGCTATTGACGTACCAAAAGAAATTGGCAACCATCTACTCTC
TTTGTACCTAAATAATCATAGTTAGAAAAAACTAGTTTAGTTTTGGGCAGTACTACGAGT
CGCAACCAACCGTGGATGCAGCTTTTTAAATGAACAAAATGTAGCAAAATGAAAAACGTT
TGAAGCAAATTCACACATTGTTGCAGCAAATCTGACGAAAAAATATTACATGCAGCTAGC
CAGCGAGGCGCGCAGCCCGCGCGCGATCGGCTGAACGATTCGGCCGGCGCGTCGGGTGAA
AACGTTTACCTTAGTTTTTTTCTGGTTACAATTATTTAGATACATAGAAAGTATTAAATA
ATAACCAAAACTGATATGATGAGATTTAATAGCTATCAAACATAGCCTATGTACAGGGCC
TCAACTCTATTTCTTTACCTTTTTTATATTATTTTTAGAAAGAATGAGGTTCCCTTTGAC
ATTTGTCGTGAGTTTCGCTCACACCTTTTGTGCAATAATCTGTCCTTATGTCTACGACGC
ACCCCTCCTTCCCCATGAGGTTTCTCCCTCCGAAAATCTAAAAAAGCCAACAAAACCCAG
CTAAGCGAACACGCCGGCGTCATCGCGCCTCGTCCCAGATCATCCGTTGCACTCAAAACT
TCCTTGACGTTGGTGTACCCTCTTCCACCCACAATCACACCCCTATCAGTGTCAAAACCG
GCTGATCTCGAGAAGGGGTCTGAACTATGGATCTAGGGTCGATGGGTAACAAGAGACGAA
GAAGGCGGTGTTTTACCCAGGTTCGGACCCTCTTAATGGAGGTAAAACCCTACGTTCTGC
TCTTGTTGGTATTGATAGAGTAGTACAGAGTACAGAGTTGATCAACTTCGAGATTGGATG
TGGTGGTCTGAACCCTAATCATAATGAGCTTAATGTGTCCTATGAACTATGGTCCCCTAG
CTTATATAGATACCACGGGTGCTAGGGTTACACAAGGTCTGTTACAATAAAGAAGGAATA
TGTCGATGCTACACTGTCTTGGATCATACACCAAGTCTCCGGAAGAGTACATCCTGATTC
CGATACTTCCAATGACAACCGAACACGCCCGGGAGTCCGGCCCATGAGAATAGGCAGATG
GCCCAAGGACCCCCATAGTTCTGGACTCCCTCAGTAGCCCCCGAAGTAGCCTCCAATGCC
GCAATTTAGGCTCACCATCTTCTCGTTTCTTCGATCTTCGGCTTGCGAGGTGAGTACCAC
CTTATATCCGGCTGATCCTTTTCTGCATTGTTCCTTCACCCGCGACTGATGAAACGTCGC
AGGGCCCACAAAAAATGAACATTTTCCTTTCATAGAGTTAACCACCTTCATGATTCCTGC
ACGCCAATGAAAATAAGAGGTTCCTTCCCAAAGAAAAGAAGTTGCACATCATATAACATA
TGCGTGCCCTTCCAACGCATCGAGAAGAACACGAGAGAAATGAAGATATGGCAACTGCCC
CAGGCTCATCCTCGCGCCCTCATGGCTCTCTCCCAGGAGATTGGGTGAGTTGTTCAGTCT
CGCGCCTCCATCTACGCGAGCTTGAGGTGCAAGGGTGTTTTCCCGACTCAGATCTGGCAC
CCTCCCTCCCTGGACTGACCTCTGCTAACGACGAGGCCTTCGCACAAAGATTCTCTAAGC
CCAACACGTCGGAGAGGGTATGTTTCATTCCATTCCTGTTACGAGGCTTAGGCTTCCCGA
TTCATCCCTTTCTACGGGGCCTGTTGGAGTATTACGAGATCCAACTTCATCACCTTAATC
CTGGATCCATCCTCCACATTGCGGGGTTTGTCGCTCTTTGTGAGAAGTTCCTACGTTGCG
AAGCCCATTTCGAATTGTGGAAGAAGTTTTTCTGCCTCGTCCCCCGAAATGAGGACGGGA
CTATTTATGAAGTCGGAGGAGCCGAAGTATTGCGCATAGTCGGGACTTGGTATCCAGTAG
GGACCCCGAGGGCAGCTTTCGAAGAGTGGACCTCGGAATGGTTCTACATCGAAGACGTGC
CTTTGTTTGACCCAGTCTGAAGGGGTATGTCTGAATTCTCAACTACTCCTCTTAAGAAGT
GGTTCAATTGGCGTCCAAGAAGCCCTTATAAAGAAGATGGCCCGGAGATGAGATGGTTGG
TTGCCAAGGTAAAGTTGTTGACACACTTTCGGCTTACTATGATTGGTGTAATGGCCGAGG
CCATAAGGCGGTGTGTTCAACCTCTCGAACAAAGGTCCCATCCGCTTTGGCAATTCAATG
GTTCGGGATGCTACTCGATACAAGCGGGACGGCCAGGCTGATCCAGCAGCATTGATTGCC
GTATTGGCTGACCTTTATGAAGAAGAAAAGGAAGACTTTATCAGTCAGAACACCAAGGAA
GGCTACTCGAATCACAACCCTATCGAATGGGTTAGTATAGTTCAACTCCCCTAATTTGGA
TTTTATAGCGTCTCTTGTCTGATTAAACTGCTGAAATTTTGTTTAAACAGGAGTGAAGGC
ATGTGGTAGAAAAAAATCAAATGCCCTCCTCCTCAGCTAGAGAACTATGCCAAGGACGAC
GACACCGGATCCCGTATGATCCGGATACGTCGACCATCTTTGAAAATGGGTTCTTTTATC
ACATGAGTGTAAATGACACCAAGGTCACCTTCATAGCTAACTATCTGAAGATACCTCCTT
CATTGAACAAGGAGAAAAGGAAGAAAACTCCTTCCCGAAAAGGTCGTTCAACTGCCACAA
TGGCCCCTCTTGCTACAACGGGTCATCGTCCCAGGCGCCAAACACCTATCATTGTATGGT
CTGCCGAACCCACACCGAATAATGGTCGGTCTTCTAAACGCGTAGCATCTACGAGGACCG
TTTCAACTGCTCCCCCCTTCAAGAGGTACCAATTTTAATATAAGCATTGCTTTTCCAATA
AATGACAAGTATTTACACTTGTCGTTGTATTCTGTAGGAACCGAACACAACCACCCCCAC
CCCCTCGACGGTGGTGGACAATGGGGAGGTTCCTCCCACACGTTAGTCCATCGAGGATCA
TGACAAGGTTTCGGTTACCAACTCCGAAGTGGAGAGTGTAATGAACCATCATCGATGGAA
AGAATCCTTACTTCATCCTGAATTTTCCGAACATGAGTTTAACGCCTTCAGTTCGGTTGA
TGCGCACCTCGGAGCCGCCCGAGCGGAACTTGAAGGAGTATGAAAGCACATATGCTCCCT
TGGTACTTTTGATAATTCATGACAACATACANNNNNNNNNNGACTAACACTTTTACCTAG
TATATATAAATTATAGTCCACATAAAGCATTGGCTAAAGGATTATGAGGAGAAACCTCTT
GATGCCATGAAAGGAATAGAATTGGCTCAACTGTCAAGAAAGAGGACTCTACATTTTACA
TTTGTGAGGAATCACTTTTGAGTCCNNNNNNNNNNNNNNNNNNNTAAAAGGGGGTGGGGT
ATTATGATGAATTGGTT