morexGenes - Barley RNA-seq Database

Contig contig_94964

Source Contig contig_94964

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_94964 (4414 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_94964

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_81185	3	2086 bp	MLOC_81185.2	Available	Available	LOC_Os11g06820.1, FRAME:+2, EVALUE:0.0, 13111.m00691 protein transmembrane amino acid transporter protein, putative, expressed
MLOC_81186	1	797 bp	MLOC_81186.1	Available	Available	None

CDS Structure of MLOC_81185

CDS Structure of MLOC_81186

Contig Sequence (4414 bp)

>contig_94964 4414 assembly3_WGSMorex_rbca.fasta
ATTTTTGGGCACTGCTGGAGCGACGCGCGCGCGCTGCATTATAGCGCGGCTGTTGGAGCC
AGCGCCTATCCCTGCGCTAAACCAGCCGGTGCGCGCCGTAAAAATATTTTTTGGGCGCGA
GCCGAATCGCGGCTGTTGAAGATGCTCTTACCAATGCAAAGATCGCAGTCGGACCCATGT
TTAGAAATCTTCGCTGCTAGTGCATTTTGTATCATACTTTGGCCCATCTCTCTCTTACTA
TTCGCTGAACAGCCGCTGTATGTGTACGAAAAGGAAAAGAAGGGAGAAGATAGAGGAGAA
AGATCACAAGTTCGCCAGCTGGTGCATGGGCCAGGTCCGCTCGTGTGCTTCGCCCCCATC
CATGCATGCATGCATGCATGCACCCATCACTAGCTACACACTACACCAACGTTTTCTTTA
TGATTCGTTCGATCTCGCCAGCTAGCTGCTTGCTTACTCGACCCTTCCTATATAGTACTG
CAGCCACTGCCATAGCAGGAGGGAGAGAGAGAGATAGGAGGAGGAGGAGGAGGAGGAGCA
GCAGAGAAAGAAGAGTGAGGATGGCATCGGAGAAGGTGGAGACGATCGTGGCGGGGAACT
ACGTGGAGATGGAGAGAGAAGGAGGAGGCGACGGCGAGCAAGCAGGGGCAGGGGCAGGAG
GCGGCGGCGGCGGAGGAGGCGGCGCGGCGGCGTCGGGGAGGAGCAAGGTGGTGTCGAGCC
TGTTCTGGCACGGCGGGTCGGCGTACGACGCGTGGTTCAGCTGCTCGTCGAACCAGGTGG
CACAGGTGCTGCTGACGCTGCCCTACTCCTTCTCGCAGCTCGGGATGGCGAGCGGCATCG
CGCTGCAGCTCTTGTACGGTCTCATGGGGAGCTGGACGGCGTACCTCATCAGCGTGCTGT
ACGTGGAGTACCGGAGCCGCAAGGAGCGGGACAAGGTGGACTTCCGGGGCCACGTCATCC
AGTGGTTCGAGGTCCTGGACGGCCTCCTCGGCAGGCACTGGCGCAACGCCGGCCTCTTCT
TCAACTGCACCTTCCTCCTCTTCGGCTCCGTCATCCAGCTCATCGCCTGCGCCAGCAACA
TCTACTACATCAACGACTCCATGGACAAGCGGACGTGGACCTACATCTTCGGCGCCTGCT
GCGCCACCACCGTCTTCATCCCCTCCTTCCACAACTACCGGATGTGGTCCTTCCTCGGCC
TCCTCATGACCACCTACACCGCCTGGTACCTCACCGCCGCCGCCCTCGTCCACGGCAAGC
TCCACGGGGTCACCCACTCGGCGCCCACCAAGATGGTGCTCTACTTCACCGGGGCCACCA
ACATCCTCTACACCTTCGGAGGCCACGCTGTCACCGTGTAATTACCATCTCCATCCTTCT
CTTAATTTTCTCTTTCTGGGAGTATATATTTTTCAACTCCTGCATGCATGCTGATGGTTG
CACAGTGAGATCATGCACGCCATGTGGAAGCCGCAGAAGTTCAAGCTCATCTACCTAATG
GCGACGCTGTACGTGCTGACGCTGACGCTGCCGTCCGCGTCCGCCATGTACTGGGCCTTC
GGCGACGCCCTGCTCGACCACTCCAACGCCTTCTCCCTCCTCCCGCGCTCGCCCTTCCGC
GACGCTGCCGTCGTCCTCATGCTCATCCACCAGTTCATCACCTTCGGCTTCGCATGCACG
CCGCTCTACTTCGTCTGGGAGAAGGCCATCGGCGTGCATGGCGACCGCACCGGCGTGCTC
CGCAGGGCGGCGGCGCGGCTTCCCGTCGTGGCGCCCATCTGGTTCCTGGCCGTCGTCTTC
CCCTTCTTCGGACCCATCAACTCCACCGTGGGCTCCCTCCTCGTCAGCTTCACCGTGTAC
ATCATCCCCGCCGCGGCGCACATGGCAGTCTTCGCGGCGCCGGCGGCCAGGGAGGGCGCC
GTGGAGCGGCCGCCGCGGGGGCTCGGGGGATGGGCGGGTATGTACGCCGCCAACTGCTTC
GTGGTGGCGTGGGTGCTCGTCGTCGGCTTCGGCTTCGGCGGCTGGGCCAGCACCGTCAAC
TTTGTGCGCCAGGTCAACACCTTCGGACTCTTCACCAAGTGCTACCAGTGCCCTCCAAGG
CACTGATCACCTAGCTTTTTTAATCTTGATTGATTGATTGATTGATCACCTACCCATATA
ATTAAGTAGCAAACTGAATTTAAAAGGTTATTCAACATGCCTAGTTAGTTTCTTCCTGAG
AGAAGAAACTTTAGTTAATCTCTCACAAACCTAGCTAAACCAAATCGTCGGAGCTTGTTT
TTGAATTTTGATCGTGTCGTCTTCTGCTTTGTGTGCGTGTCGTGTTTGTAATTATCAGTT
CATGAGAACTGTATGTATGTGTATATAATGTATGTATCTCAAGATCAGTGATATATATAT
CCATGCATCTTTGAATTATAAGAAGTATATTTGATCTGTTTCTCCATGGATTTTAATTAG
ATGCAGAGCATTTTTTGTCTGTAGAATTCAGAAACCAAAAGAGGGTGATAAGAGATTGTT
TGGCTCAATTGTTGTTTTGTGCGGGGCGTTTATTTAGCTTAATTATGGTGTGCATGCATC
TGCAGCTACACTACAAGAGTGGAGATAATTTCTACAGATTTTGTGTCATGTCCTGTCCAC
ATATGCATGCTAGTTTGCAGCGACCCTACTAATCTATTAGTTCGGATCTTCACATACTCC
TTGATACATTAGACTAATTAGAGGGCCCTACCATCTACCAGGAGTAGTGATGCTCCATCC
CCTTCACAAAGAGGACATCCTATGGTGATGATGATGATGGATCCATCCAGTTAACTGATG
ATACCCACAGGACAACTAATCAATTTCACCTGTCGAAGAAACACGTGTGACAATGATCAC
GCGTTGCTTTGGTCCACCTTTAATTTGTGCCAGAAAATCAAAGTGAGCATATATATGTTT
AGGCGTCAAAATCCAGCCCATATGTGAGGCGGATATGAAGAAGTTAGGACGTGTCCGCCA
TGTCAAACTGAGGAGGGGGGGGCACGCGGAAAGCCATGAACCAGGAGGTCATTGGCGTGC
ACTCAAGCCGCCGCTCTAGTGCACTGCCCAAGGGGCCATACCTGGTTATTTAAGCCGGGC
GACGAGGCTCAACCCTAGGCGCCCCCATTTCCTCCCTCTCCTTCATGTTCACACCGCCAC
CATGACCCGCCTCTCACTCCACTTCGGCATTGCCGTCCGCTGACCGCCATGGTCCCACAC
AAGATTACCTACTACAAAATGATAATCGGGGGCTGAGCGGAAATGTGCACCGTCCATCCA
CATTGCAGTCGACCTGCCTCCGAACTCCCCGGAGGGGAGCCGGGAAGAGGATGCATATCC
AGAGCAGGTGGGGGTGGAGGTGCCGGAGCAAGAGGAGATGAAGGCAATGGACGAGGAGAT
GAAAGAGGTGCAGACACGGAAGGAGGAGGAGGTGAGAGAGGAGGAGGGCGCGACGGAGGT
GCCGGAGCAGGTCGGATTCGGCATGGATTACACGCTGGCGCAGTTCGAGCTCGCCCAAGC
AGAGGAGGCGGCGAAACAACCGGCCATCCAAGTCCACCCCGTCCGAGCTCTAGGTGGCGG
TGAAACGCCGCTTTATTCGTGAGGCGGGCATGAAGCATGAAGCATGAGGAGCTGAAGATC
CATCCCGTCGCCGATGACCACAAGGCCAGCGTCTCCGGCAAGGAGGTCATCAACATGTCC
GATGACAAGTAGCTAGCTTGCTTTAGTTTGTTTTATGTAGGCAGATCAAATGGACGTTGC
ATGAACATTGTATGGAAATGAGGATTTGAAAATAGGGAATGTGGTTGCAATATGTGAAAA
CGAGGGGTTATCCGACGCTGTCCGCGGACATTTCGGGTTGCAATATGTGAGAAATGAGGG
GTTATCGGACGCTGTCCGCGGACATTTAGGGGCTCACTTTTGCTAGGTCCAGTTGTAGAT
GCTCTTACAGATTCTGGTAATGCAAAGATCAGCGTGAGATTGGTACTGCAGTGTGAGATG
AAGAAGGGAAGAAAGATCAGTGTGAGGTAAGGAAAAAGGGAAGAAAGATCAACTGGAACT
GACAGCATGTGTGCATTGCATGTTGGGGAAAGGTGTGAGAGGGCTGTCCTTGGCGTTGAT
GGTCCATGCATGCCTTTGCTGTGAAGAAACTGCAGGACTGGCTACCTTTGAGACCATGTG
TGACGAAAAGCAGAACAAGTTTTCCAAACGAAAAGAAGATAATTACTCTCTCCGTTTCAA
AATAAGTGTCATGATTTTACTTCAAGAACGGAGGGAGTAAGAAACAATGCATTGCAGTCG
ACACTGGGGGGGGGGGGGGGGGAAGTTTACAAGGGGGCCTTTTTCACCCCACCACGCCGG
CGGGACGGTCCACGCAACACGAGCACACACACAC