| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_94324
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_81078 |
2 |
2490 bp |
MLOC_81078.2 |
Available |
Available |
LOC_Os12g34980.1, FRAME:-3, EVALUE:2e-36, 13112.m03572 protein csAtPR5, putative, expressed |
| MLOC_81077 |
13 |
3305 bp |
MLOC_81077.3 |
Available |
Available |
LOC_Os04g59560.1, FRAME:+2, EVALUE:5e-26, 13104.m06284 protein tubulin folding cofactor B, putative, expressed |
CDS Structure of MLOC_81078
CDS Structure of MLOC_81077
Contig Sequence (8496 bp)
>contig_94324 8496 assembly3_WGSMorex_rbca.fasta
TTGTTTGGGACTGAAAGGCTTGGTTCTTGTTGTTGTTGTACCCATGATGATTGTATCCTT
GTAGTACTTTTAAGGCAGGATGGAGCCTCATGGCCACACATAAATCTGTGATAAATGGTA
AGCCTATAGGCCATAGCTAGCATGATTTTTTAACCTTTCTAATTTCGGTTCAGTTAGAAG
ATGCTCAGTGAATACATATGAACTTGCTGAGGAGATGATTTGAAACATTGGAAGACATAT
TTTGCAAAATTTAAGAAATATATATGGGACATCTCACCTCCGATTATCAATGGGATTATT
CCTAAAGACCAAATATGCATCATGTTATCATTTCGCCATTCTGCTTTGTTATGCGTTGAT
GGCAGGTCAGGAAGGCTATCATTTTTTTCTGGGGGTACGCTAAGGCATACCATAATTTTA
TAGAAGACAACATATTGTTTTTTACAAGAAGTTAAAAAAATCCCTGCGCCATGCGGACAG
CGATATGAGCTAACTCATCCAGCCCTACTCCTACTCCTAGATACAAACTATTCACCTCTC
ACAAAGTACTCCAAGTTCACCTCTTGTGTTTTTTTCCATAGCATCAGTCAACTACAAATA
AGTCCTCTTTAGCTCTTCCTATGAATGCAGTCCTTGCATTGATATATGCACCAAGCTTCG
TGGTTGTCAGTTCGTGATGGCACACGCACCGATGTTAAGATGTAGTATTCTGAAACATTC
AGTCCATGTTGATGCACTAAGACGCAATGCAGCATGACGTGGTTAACTGTATCCTCCTGT
TGCAGGCAAGTGTAGCATGCAACCTTGGAGTTTTGGATTCCATATCTTTCTCTTTGATCT
GATGTCCAAAGCCTATACTGGATGGCCAACCAAGCAAAAAAAAAAAAAATAGGGGCAGCA
AATATTTTCATCGGAGGCCGACCTTAGGACGATCTTTTAGGATTGGCCTTGTTCCGTGGC
GGGCCAAAGTCTGGCCTGGGCTTTTAATCGCGTGTTAGGCCGGGCCGAAATTCCATGCCC
GCACGCCGGCCCGCGCGGCACGGCTGTGCATGGCCAGATTTGGACTGTCCCCTTTTCTTC
TTCCTCCTCCCATATCCCATAGAGCAGAGGAAAAGAGAAAGAAATTTAAAATCTCTTCTT
GCGTTGCTCGGATCCTCTGCTTCCTCGCCGTCCGTGTCCCGCCGCCACTAGCGTTATCCA
TCAAGACCGCTACCGCCGCTCCACAGTATCTGAAACTCAGCTCCAGCTCCAAGCTAGGTA
AGGAATAAAGGATTCCCCTTTCCCACTGCCCGCAGATCGTCTCACCTGATTCCTCTTCTT
CACCAGACCGTCTCCTATGTAGCTGCAGGTACTATTCTTGGGCCTCAATGCTCGATTCAT
CACCCAGGCCAGGCTAGGTACCTCCTCCCGTCCCCAGATTTACCAGTTTACAGACTTTCT
GTCTTGACCTGTACTACTAGTGTAGTACTCCCTCCGTCTCAAAATNNNNNNNNNNNNNNN
NNNNNNATTTTGTACTAGAGCTAGTACAATGTTGAGACAGTTATTTTGGGACAGAGGGAG
TAGTAATCTCCTCCTTTTGCAAATCAACGGGGGACCCCATCACTTCAGTCTACTTATTTT
GTTACTCCACATGTTGGCAAGGTATCTACCCCTCAATGCTTCACTCGTATTTTCGGTGTT
TGCTGTGGCATTCGACAGTTAAAACTTGATGCCACTCTTCTGGACATGATCATCCAAAAT
TCTTCTGATTTTAGTTCACAAGCTCGGATAGACAAGACAAACCTTATATCTGTGCTCAGC
AAAATAGCTCGGATAGACAAACCTTATATCTGTGTTCAGCAAAATAGAGATAATGTAAAA
AAAAAAAAAACTGGCAATACAGCCCTAACTATGTTATTGTTATGAAGATATGCATGGTGG
TATGCTTTAAGAAATTTTCTTCATCATTTGCTATAGACTCCATCATAACATCTAAAATTT
GTGCAACTGTGCAGCAAACTTCTGGGAATTCGTAGAAAAGAAGGTGTAAAACAAGCCTAT
ATCGGATGATAATCAAGTTGCTCACCTTCTGGCCTACTTTGTTCCCTTCATCAGCCTGGT
TACTCAATTTCTTGTCTCTTTCACCAGTCAGAATCAAATGGAGGAATTGTGCCAACATCA
AGGTCAACTAATTTTCTTTACACATGTGCATATGAATGGAACATTGCAACTATTGTGAGT
ATTGCAGTGTATATTTCCTTCTAATAGCTAAAGCACAGTAGTAATTCTTCTCGTAAAATA
TGACTGTCAACAAGTGTATAGTTCAATAAGTTGACAATCAGTAGGAAATTCTACCAAGAT
AATTAACTTATTATTAAGGTACTCTGCTTTCAGAGGTATTTAGTAAATACTGCTTCTTTG
CTATTGAAATGGACAATCTGAAATACAGGTGAAAGCTTTCTTCTTCTGTAGCATGAAATG
AAAGATGTATCCGTTTTATTATGTAATATTTTTAGATTTAATATTAACATTTGCAATAGG
TGGGAGATAGATGTGAAGTTGAGCCAGGTGACAAGAGGGGCGCTGTATAATTTGTTGGCA
AAGCTGAATCCCTTGGACATGGATTTTGGGTTGGAGTGCAATACAATGAGCCACTCAGAA
AGTAGGATGGCATGTTATGTTCATTCTCAGACTGTGACAGTGATGAATAGTTGACCTTTG
AAGAAATAGCTCTTTGAAGCATTTTCTTTGATTTCTCGGATGCTGCAGGGTGAAAGGCGT
CCACTTCTTTGAGTGCCCCCAAGGGCATGGAGCAATTGCCCTGCCAGAGAAAGTAAAGGT
ATCTGTCTTTGCTACATGCATACAATGCTTATTATTGCGGTGGCTGAACTTGAACGGTGC
TTGCTCAAATAATTGAATTTCATATATCTTCTAGGCTTTGTTCCCTTAAAACAACGGAAA
CAGTGCTTGATCTTGATGGCAGTTTGGTTGCAATGGCAAATTGGCAACAGTATGTAGCAG
TGGATGCCGGGATGGTTTGCATCATATGTTCTTGTGATGCAACGGCGGGCTTATTGCATT
GTGGTGACGTTTGAATTGACGTATTGGAAGAGTTAGAGAGGGGCAATTAATTCTAGCCTG
CAGCAGAATAAACATGTGTTACAGTATATAAGCAACTTGAGCCAGAGCTAAAAGCATGTG
CCCCTAGTAAGATGATTGTCAACATGCATAAAGTACCACAGTAGTAGTTTGTTATGCTGG
TGGAAAATAGAAGTTATCCTTTTCCAGTGTGTCAAACTTTAGTCAGCAAAGGGAGAGAGA
GCTAGCAAACTTTGATTGACTAGCAGAACTTTACTAGTCATTCTCCACCTAGGAAGCAAG
CAAAGTTCAAGTCTTGACTTGGTCATTCGATACTCCTCCCCACTCTTGCGCGGGTCAACC
GTCAATCTTGAAGCAATTCATTTTTCCAATTTTGACTTGGATACTTTTAAGTGCCAACAA
TGTCCATGCCCTTATTTTCCTAGGTCGACAAAATGTCATGTAGATCTCTAAGCAGGTCCT
GATCCATGGTCCCATTTTTTTTTGTGCTGTGTAAATGGCTGAAGCGTGCCATGGAATCTA
AATATGTGTGTGGTCTTCAATCAGGAACATCATCTCTTCCTAATTTTTTCCTGATTGGTA
CTACTTGGTATACTTCCAAGATTAGCACATTGATTTGATAAACCATATGGGATGAGAGTA
GTTGCCTCGACATGCTTCTGTTTCTGTTATTTCTGGTGTCAATGTCCTCTCTGGAGAGCA
AAGTGTTTGATGATATATCATTAGGCTTTTTCTGCAGAAGTTGGATTTCAATTTTCCTCC
ATATTTTCAACATTTTTGGTTTCTGTGCTGCCAACCCATGGCCGCCTCGCCACGTCTGTG
AAGGACATATTGGTAGAGTCCCTGCTCCATGGATACAAATTTGACAGGTACATGGTAGTG
TTATGGTGTAATGCCTGGTGCTTTAGCGGTTATTATGGTCTGGCATACATAATGTTCAAA
CATTTTATCATCATCCGAGTATGATAATGTTAATGTGCCTTTCAAGTTTGAGGATCAAAA
GATTTAGTTCTTACTGTACTGTTACTGCCAAGTTCAAGCTTGTAAGTTGTTGCCTCCGTA
AGATGATTTATTATGTGTTATCTTATTCTGCAGCATCAACATGGCACCCTTTGCCGCCAT
GATACTGGTTCTACACACATTGACATGGCTCGATCTTGTCTCGCTGATTATCATCCATGT
GATTCATGCGTGCGGCAACCTTAAAGTAAGACGGGCCATTCTGGACTATGCAGTTTCTAA
AATCCGATTCTTGTGCTGCAGGTTGCTGTTGTGGTACCGGTCTCATGGTTGATCTTCCGG
AACCCTAATGAATGCAATTTTGTGCGCAGTTACGCTCGTTGGTTGTACTTTCTATTGGTA
CCGACATCCCCCAGGGAGCCAAGGAATGAAATCTCGGCTGCTCCCGGTAGTTAGCTAACA
GGGCCGGCCCTAGCATTCCGGAGGCCCTTGTGCCAACATCATATAATGGGCCCATACGCT
ATACCACACAAAAATATTTCCACCCCATGCATACCACCCTTTTGAGTGAATTTATCTACA
AGTTTCTTATTTCTTTCTTTTCTCCCGATCAGATAAATGCTTTTTTTTGCACCATAGTTA
AAAGAAGTAGAAAGAACACCTGAATTCTTCGATATTGATCTTGGTCTCTTGAAGTAAATT
AGAAGAAATCTCACACTGCTCGAGCTATCCAATATTCCAAATCAAGCAATGCCACAACAC
AAAATCTACCTGACTACAATGTCATATAATAAGGAATCAAGCACGTCAAATATACTTACA
TCAATTTGTCCTAACAGAAAATAAGCAAGGAAAAAATTGAGAAGCAAGGAATTAGAATGA
AGTGCGGTGCCTAGACTCCACGTCTCCATTGTCTGCCCTTGGATGGTCGGAACCATGGCC
CTAACGATGGATGGCAAGGTTGCGGCATGCTGCTCTCGGTGTTCCAGCCAGCCAACCAGG
GCACAAGCAGGTGTCGTCGCTGGCCGACGCGTCTGTGCGTCCGTTCGACGGGGTCCTGGG
GCTATTTGTAAGGTGCAAATGAACTCGAAGAAATTCATTGGAGTGTGATACTAATGGAAA
ATTCATTCATTTGTTTGGGATTTGGAATCCAGGCCCGTTAGGAACTCATGGCAATAGTTA
CTTTTGGGGAAGAGGGAGAAGATGAGAACGAGAGGGAGGGAGATGATGAGTTAGCGGCGT
GTTCTCGAGGAGAGCGAAGGAAAGGTTTAGGGATTGACTTGTTCGTTCGTGAGTGACTGC
TCACTATTTAATGCGCTGGGTTGCTTTATACATATAGAGTATACATGTATAGAGTATGGG
CTCCTGCTCGGGCTGGGCCCTAGTCCGTCGCACTCGTTGCCATGGCCCAGGGCCGGCCCT
GTTAGCCAAGGAATGAAATCCCGGCTGCTCCCCGTAGTTAGCCAAGGAATGAAATCTTGG
CTGCTCCCCGTAGTTAGCTAAGCAGGAATGTAACGAAGTAAACCTTGGCCACTTCCCATA
GTGTTAAGCAGGAATGTAAAGAAGTAAACAGATGATATATACTCCCTCCGTTCCTAAATA
TAAGACCTTTTAGAGATTTCAGTATGAACTACATACGGATGTATATAGACGTATTTTAAA
ATATACATTCACTCATTTTACTTCGCCTATAGTTCATATTAAAATCTATAAAAAGGTCTT
ACATTTAGGAAGTATACGTTATGTGATTTGACTATGCAGATTGTGGATTCTATATAACTT
AGGATGAAGTAAACGGATAATATGTACCTCACGTGCTCCAAAATCAGGGCAAACTGATAT
TTGGAGAATTTAACAAGTGACACTCATTGTATATATGTACAACGCTTGAAAAATACTCCC
TCCATAAAAGAAAGAAATATAAGAGAGCGTTTAGATCACTAAGGCCATGTTTGGAATATC
GTTTCCCTCAGCAATACACTTGTAAATAATACAGATCTTCCCCTGTCGTTTTGTTGTTTC
CAGGCAGAAATTAGTACTAGCCCTGTAAGTTACACCTGTAAATTAAATACTTAAATACAT
CCAATCCAAACATGCCCTAATTTAATAATGGTGAACGCTCTTATATTCATTTAAAGAGGG
AGTAGCTAAAAATAACTCGGGAGGATGAGCTGGATAACAGAACCGTAAGAGAATTTCAGC
AGTTAGTAGAGCATGCCTCGGCTTTCTCCTGGCCGAGAGATTAATCACTCTATTCTTTGC
GCACTTTGGTTGTGTGGATTCTCCTGGCCGAGAGATTAACCACTCTATTCTTTGGGCACT
TTGGTTGTGTGGATTTGGGAGAGGATGCTGCCTTCACCTGTGTGACGATGGTCATCAGGT
GGGTGGTCCGGACAGGTTGAATTGCACCCAGCTGCGGCACGCACGATAATGGGCTACAGT
TCGTGTGATGTTTCCGTTGAGCGACTGAACAATGGGTGGTACACAGGCGATTGGATAGCT
TGTTAACTAATACAAGAGCAGATTTTGTATGCAGCAAGGGTGTTGTTAAATGCAGGTCAA
GTAGCTCATCACAATAAAACCTCTGGTATCTATGTCTCTCAGTCTTAACAAGAGAAGAAT
ACCAACTCGTTAACTCACTGTCACTTGTTGCCGAGGCAGCGGCACGAAAATCGCCCATGG
CATCAGACAATCAGACCCAATCTGCATCAGTTTCTTCAGTATACCGACCGACGGAATCAG
CTGATACCCAAATCTTGAAAATCAAAAGGGAGAAACAATAATAGGCTAGCCCATACATAG
GCTCAGCTCAGGATGCTTACACTCCACAATGACGCTGCTTCATAAACGTACAGTGGCTTT
TGATCCCTGAATGTATTTTGTAAGTCGCAGAACACAACAAACAGCCCAAACCAAATCTGC
TGATCATACCAAATCAAACAAGACAATTATTCTATAGTTCTAACAGCTCATGCGCAACTT
TGTCAACTTAAAATTTATTGAAAAGAACCAAGTCACTAAGGCTGGTTGTAATGAGGAGTA
TCATATACTACACCCGTAATACATAGTATCATATGTTAGTATCATAGACTAGGTCATTTA
TTACCATGCAAGACACAAAGTAGCACAACATTTAATATGATACGGTATCATGATATGATA
TTCAACCCTCTCTTTCTTCATTTAATTCTAAGCCACCTCATCAAAATTGTCTAGTTGGCA
TGNNNNNNACTACCTATGATACTACCATTACGACCAGCCTAACATCATTGTTGAAAGGTT
GCACATTCAGGGATCTAACAACAGCCTTTATGGGCAAGACACCACACTAGGCCTGGGTAA
TATATCCGTCAATCAAGAGATCCATCTTGTCGCGGACAAGCCGGGACCAAGCAACAGTGA
TATCCACCTGAGAGCCACAAACCCAACATGTACGCTGACTTATGTTGCAATACTCCGAAG
GGAAGTAGATATGACTAGATGTAGAACCAGACCCCCCATACGGCTTTACCACGACATCCA
ATCCTCCACCACATTGTACCGAGACGACTTTCCTTGACAGAGGGAGGTAACCATCTAGAT
CAAGCTCTTCATATTCTTGGGGAATTCTTTCAAGAGAATCGAGCAACACAACCTCGTGCA
TAGCAGGACTACCATCTGCACTAGACGACCAACAAGAAACTTGGACTCCAGATTTGAAAG
GAGACCGCCCTCCGACAACACGAACTGATAAAATAGTGGCCTGTATCGTACTAGGAAGTC
GTTCAAGGCTCAACTTCGCTGTACACAACGGACTGTGAAAGGTTAAACATGGAAGCTCAC
CGCTGGGTGCTACCTCGTAGCGGCTGCTAACATAGATCAATTCTCTATCATTGAGCCCAT
CACCTCTAGGATCACAGCCATCATGTACTCTTAGTTCGACTTCAAAATCAACAGGGTCCA
TGGCTAGAATAGCACGAGACGGGCCAGTCAAGCACAGAGAACAATCCTGCAAACATTAAT
TAGATCATCATCATTATATTTAAATGGAATGTTTTGCTGAAGAAGAAAAATACTACTCTA
CTTTAGAAGAAACGAAGAAAAATGAAGAGAAAAACTGAAATACAAAAGTGCATACATTTT
CAGACGTGAGTACTTGGCGCATAATACTTGACCGAGAGAAGAGAAGGTTGCGGTTGTGGT
CCACGGTGTCTCGGGCAGCGATCACACCATACACATTGAGTGGCCACTTCAGGTCGTCAC
TTAGTCCTGTAATTTTGAAGGAATAGATCTGCAAGGTGCTCTCAATGACAGCGGCACGGG
GCGGGATGATACCGGGTATGCAGTGCGTAAACTGCATGGGACTCAATGTGGCTGCAACAC
AAATTAAGCAAAGACTAAGCAAATTTCTTGAGACATGCATACAACAAACAGACTAAGCAA
ATAGAGTCTGAGTAAGCAATTTTCTTACATGCATAG
