Contig Data
morexGenes
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Map Locations of contig_93542 (4153 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_93542

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80912 3 3229 bp AK358394 Available Available None





CDS Structure of MLOC_80912






Contig Sequence (4153 bp)

>contig_93542 4153 assembly3_WGSMorex_rbca.fasta
AAAAAAAAAAAAAAAAAAAAGAGTAGCGGCCAAGCTGAAAGCCAAGGGGGAGACAAGGAG
GACGAGGTGTCCAGTCCTTGACGACTGGGCTAGCCGCGTACGCATTGCTTGCACCGATCA
TTGGTCACAAGCAGCGGCATGGATGGATCAAAACCGCCATGATAGACGGGGCACCACCAG
TACCAGTACCACAGGACAGTGTGCGTCGACTGACCGCATGGGTTGACTCGGCCGAGATTT
TATTGCCTGGCCTGGCCGGGCCGGAAACTACGGCGAGCCGTCGTCGTCTTGGTTGACTGA
CGTGGAGCGGATATTCCTCCCGGCGATCCCTTCCGTGCGCAATGCAATCCATGCGCGTGG
CCTCCATAAATAGGGCCTTCCCGCCGCCGGCCTCCTCCAACAACCGTCCTCCTCCGCTAG
CTAGCAACTCTTCTTCTCATCTACTACATCTCTTCCTGCCTCGACTGGCTGTTGATGAGG
TTGCAGCCAGCCCCCGACCTATCTCTCTAGCTGCTTCGTCGGCGACGGTGAGTACCGACT
GTCTCCTGCTCACTCGATCGCCGGACTTGTGTTGGCGTTATCTATTTTCTTTCTCGGTTT
GCGATCGATCTTCAGCTTGGCGAGAGCAGTGGATTCCTCACTGAAACACATGCATGCATG
ATTCCGACCGGTGTTTTATCACCTGCTTGAACTGCTGCAGCGCATCACTTCTTGCTACCA
CCTTAAACTGCTAGCTCTTCAAAAGAAAAGAGATTTCTAGCAAGCTCTGCTGACACACAT
AGCAATCCAAACCATCTTTGCGCATGAGTAGGTCGAGAGAAGCCAAAGGGATCTTCCAAA
TTTCGTCTTTCGAACCAGCAAGTTGTGGTGAGTGGAGGCAGTATCCGGAACTGAAAAAAG
GCGGATCAACCAAATCCCCTGCCTGCAGCGAGTCACCTTTTGATCTGGGCTGTCACGTCA
CCTTATTGTTTGCCCCCTTTTTTTCTTTTTTTCATGCCTCCTTGATCGTGACAACCTTCA
TTTGTTTCCTCTTTTCCATCCCCACCTTACCAACATACCACAAAATACATTATAGTTTTC
ATTTGGGATTGCCTACGTCTTCTCAGTCGACTGAGACTTCACCAAGTCTCAGTCAAGTAA
TATAGCATGCGAAAAGAAACAAAATTAGAATTTTTTTTATTTACACGAATCTTGATGCAA
AATAAACGGACTACAATATCGACTGAGACTTCGCGAAGTCTCAGTCGACTGATTTTTAGC
AAAGCCGTTTTCACTTACTAGAAAATAAAAAAAATAGTAACATTTTCCTTTTCACCAACA
AAATCGGAACAAGATAACTTATTAGGGTGCGAATATTCCCTTTCAGGAGGAGGAGCCGCA
GTATTTATCTTGTCCAACCCTCGCGGCTCGTCCCACCCTAAAATCTCTGATCTTGTCTAT
CTCTCAGCACAACCAACAGCGATCCCCGGCGGCGGCGAGAGATCAAGGCTCGCGGCCATG
GCGCGCGAGCAGCTGGAGGTGCTGTCGGCGCTGGACACGGCCAAGACGCAGTGGTACCAC
TTCACGGCGATCGTCATCGCCGGCATGGGCTTCTTCACCGACGCGTATGATCTCTTCTGC
ATCTCGCTCGTCACCAAGCTGCTCGGCCGCATCTACTACTACCGCGAGGGTGCCGACGCC
CCCGGCTCGCTGCCGCCCAACGTCGCCGCCGCCGTCAACGGCGTCGCCTTCTGCGGCACG
CTCTCGGGCCAGCTCTTCTTCGGCTGGCTCGGCGACCGCATGGGCCGCAAGCGCGTCTAC
GGCATGACCCTCATGTGCATGGTGCTCTGCTCCATCGCCTCGGGCCTCTCCTTCGGCTCC
ACCCCCGGCTCCGTCATGGCCACGCTCTGCTTCTTCCGCTTCTGGCTCGGGTTTGGGATC
GGCGGCGACTACCCGCTCTCCGCCACCATCATGTCCGAGTACGCCAACAAGAAGACGAGG
GGCGCCTTCATCGCCGCCGTATTCGCCATGCAGGGCTTCGGCATCCTCACCGGCGGCGTC
GTCACGCTCATCGTGTCCGCCGCGTTCCGCGCCGCCTTCCACGCGCCCGCCTACGAGAAG
GGCGCCGTCGCATCCACGCCCCCGCAGGCCGACTTCGTGTGGCGCTTCATCCTCATGTTC
GGCGCCGTCCCGGCCCTGCTCACCTACTACTGGCGGATGAAGATGCCCGAGACGGCGCGC
TACACGGCGCTCGTCGCCAAGAACGCCAAGCAGGCCGCGGCCGACATGTCCAAGGTGCTC
CAGGTGGAGATCGCCGCCGAGGACGAAACCAAGGACAACGACGGGGCCGGGGCCGGCGAA
GACCGCAACTCGTTCGGGCTCTTCTCCGGCGAGTTCCTTCGGCGGCACGGGCTCCACCTC
CTCGGCACGGCCACCTGCTGGTTCCTCCTCGACATCGCCTTCTACTCGCAGAACCTGTTC
CAGAAGGACATCTTCACGGCGATCAACTGGATCCCCAAGGCCAAGACGATGAGCGCCCTC
GAAGAAGTGCACCGCATCGCGCGCGCGCAGACGCTCATCGCGCTCTGCGGCACGGTGCCG
GGCTACTGGTTCACCGTGGCCCTCATCGACCGGATCGGGCGCTTCTGGATCCAGCTCGGC
GGATTCTTCTTCATGGCGGTGTTCATGCTGGGGCTGGCCTTCCCGTACCACCACTGGACG
ACCCCGGGCAACCACATCGGGTTCGTGGTGCTGTACGCGCTCACCTTCTTCTTCGCCAAC
TTCGGGCCAAACTCCACCACATTCATCGTGCCGGCAGAGATCTTCCCGGCCAGGCTCCGG
TCGACGTGCCACGGCATCTCCGCCGCCGCCGGGAAGCTGGGCGCCATCGTGGGGTCGTTC
GGGTTCCTGTACCTGGCGCAGAACCAGGACCCCAGCAAGGTGGACCACGGGTACAAGGCC
GGCATCGGGGTCAAGAACTCGCTATTCATCCTCGCCGCCTGCAACTTCCTCGGCATGGCC
TTCACCTTCTGCGCGCCCGAGTCCAACGGCATCTCGCTCGAGGAGCTCTCCGGCGAGAAC
GACGACGAGGCGCCGGCGCCGGCGACGCACGCCAGGACGGTGCCCGTGTGAGACGTCGCC
GTACGTCAGATATACCAGTATATGCTACCGGTGGTATACTCTGCAGGTTTGGATGGATGT
ATGGGTGTTTTCTTTTTCTTGGTTGGGACGTTCAACTCAGGAGTCGAGTACAACAACAAT
ACTACTATTGTCATGTGTCAGAGTTCTCCATGTTAATTAATTAATTAGAGTTTATGGTCG
ATTTAATTATTAGTAGTACGGGTTCTCCTAAGCTATGTTCTACTCATACCAAAAGGACCC
TCAATCATACTCACGGCGAACCCATGGGTGAAGGTTCACTTCTCGTTCATGTTCTGTCAG
ACTCCAAGAAAAATCTGCCTCGACTCAAGCGTTCCCTTCCCAACCCACATTGTGCTAGGG
TTACCTCCTAATCTCTCACCACCGTTTAAATTTTCCCCATGACCAAGCCACCATTCTCTT
GTGTGCGACCATGGCGACCAAAAGCACTACCGCCTAAATCCCAACCGTCGCTACCACGAC
AACATCTTGATCCCAGTAGTCCTAACCATTGTCGACGGACCCGCCGTCGCGTCTCGATGC
TTCTCCGTCCAAATATGCCATCACCGCCGCCTTGTCCAAGCTCTTCATCGCCACCCCTGG
TCTCCACCGCCTTCTACAGAGAAGAAGGTACCTCTTGCCTCCTCATCCATCCTCCTGCCA
CATGCCTGTACATGCCTCCTCCATCCTCCCTAGCATGATGTTACATTTTGTTCTTGAACA
ACGCAAGGCCGTTGATTTGAGTGTGAAATGCTACCGTATAATTCCTATTTTCTGAGTAAT
ATGATCTGAAGCTGGAACGAGGCTGTGCAGACACATGCTATCAAGCAAAATCTGGGCTCA
GTATGTCTCAGCATGCACATCATGTCAGAGGAGGAACAACATGACATGATCGTGCAGGCA
GCAAAACACACCCATGAATCGGGATTTTTTCACTGTTTTGATCCTTAAGGCGTAAGTTCA
TCACAAAACGAACNNGCTTCGAAAGTATTTCACGTTTTGACCCTTTTGGAAACGCCAGAG
ACCGTGGCGTTGC