Contig Data
morexGenes
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Map Locations of contig_93462 (3057 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_93462

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80902 1 805 bp MLOC_80902.1 Available Available LOC_Os01g52680.1, FRAME:+1, EVALUE:6e-81, 13101.m05516 protein OsMADS32 - MADS-box family gene with MIKCc type-box, expressed





CDS Structure of MLOC_80902






Contig Sequence (3057 bp)

>contig_93462 3057 assembly3_WGSMorex_rbca.fasta
AATAAAAATTAAATTGTCTAAAAGATACGCCTATTGGTTGCCAACATGATCCCACATATN
NTCAACCAAATCATCTTGCAACTGAATATGAGTTTCCCAATCACGCATTTCATGGTGAAA
TTTGGTGAACTGACAAAACGATGTCGCTTCTCCGCCATGTTGAGGCACCACATTGTCACC
GTGAAACTCAAACCATTTATCGTGGAGACGTTCCGGGAGCTCATCCTCTATTATCATATT
GTGCATGATCACACAAGCAGTCATCACTTCCCACAACTTCTTGGTGCTCCCAGTTCTAGC
AAGATACCTAACTATGCCCCCATCGAGATTACAAAACACCAAAGGCACACTCGACATCCT
TCCTAGCACTCTCCCGCTCTTGGGAAAATCTTTTCCTCTTCTCGCCGATAGGGTTGGAAA
TTGTCTTCACAATAGTGGTTCACCATGGATATATTCCGTCACCTAGATAGTATCCTTTGT
TGTAGCTGTGACCGTTGATGTTAACATTGACCGGCGGGCTNNNNNNNTCGGCAAGCCTTG
CAAACATCGGCGATCGTTGAAACACGTTGATATCATTGTGCGATGCGGCCATGCCAAAGA
AAGAGTGCCAGATCTAGAGCTTTAAGAGGCCACGACCTCAAGTATGACATGACCCTTGTA
CTGGCCTTGCCAAACAGAAGGGCATTTCTTCCACTCCCAGTGCATGCAGTCTATGTTGCT
AAGCATCCCTGGGAAGCCTCGGTTAGCATTGCTCGCCAACAAGCGGGTTGTGTCTGCACT
AGTCGGCTTTCTCAAGTACTCATGGCCAAACACTACAACCACAACCTTGCCGAATGTGTA
CAACGACTCTAGGCACGTAGACTCACTCATACGGACATACTCATCGATAAGATCATCGGG
TACTCCGTAAGCAAGCATCCGGATAGCTGCAGTGCATTTGTGATAAGATGAGAAGCCTAT
CTTTCCAATGGCATCCTCTTTCACTCAAAGTAGTCATCGTATCCGATCAACCCCTCTCGA
ATCTAGTTGAAAACACACCTAGCCATATCGAAACGATGCCAGAATTTCTGATGTTTGAAC
AGCGGATTGCTTGTGTCAAAGTACTCCTTCCATAGAAGGAAATGGTCGCTCTCTCGGTTG
CGATTCAACGTCCGAACATGCCCCGGAATCGAGCCTGGAAACACTGCCTATTAAGGTGGT
CATGGACCAACACGACAAGCAACATCTCCTCATCGCGGGATGAGGAATCGTCGGAGTCGC
ACAGAACATTATGGAAAAAGAACTGGTCGGCGCAATCCATTTGTACCTTGAGGCGAACTG
TCGAACAACTTGCGGGCGTGATGACGAAGCTGACCCGCGACGGCGGATATGGGTCGGGGA
AGCTGCGGTGGCCCGATGACGATGCGGCCGGCAACGTGGGTAGGCGCTGGGCAGGTACGG
GAGGAGGCGTTGGAACTGGGCGGCGACGACGACGGGCTGCGGACGAGCCGAGGGCTAGAT
GTCGGCGTTGTTGGTAGGGGTGCAGAATGACCAATTGGCCACCGACGGGCGGGCCAGAGG
ATGAAGTACGCGCGTGTCGTTCGCGTCTGCATAGACCCAAATCAGGCTCAAAATTAGACC
GAAAATGAATCGGCATGCAGACGAAAAGCGGACGCGCGTCCGTTTGAGTCAGCGTGTTGA
TAAATTTTTCTGTCCACGCGTACCCAAACAGACGACGACAGACGAAATAGATCGTCACGT
TAGAGTTGTTCACTACCTACTTAATACGTAGTACTGGTACTTGGAACTACGTATGCGTGA
GCAGCGATAGGCCTGCTGCTGGCTGGGGTGCCCGCCCGGCCGCATCCACTGTGGTGGAGG
ACAGTCGACACGTCTCCGTCGTTTCAGCCTTGCTCCCTCCCACGCCTGCAAGAAAGCAAG
CAAAGCCAGGCCTGACACGAGACTAGACTATCTTGTCTTACTTCCGAGGGCCACACCCAT
CTTTAAATCAGGAAAAACCCAACCCCCATCTCACCCATGCCCTCGCCCTCGCCCGCCCAA
GGCCAGCTACAACTACTACTCTACTACAAATACCCCCAACAAGCAACGGACTGTTACATC
CCTCTCCTCCACGCAGCAGCACAGTAGAGGTAGCTCGCGCGGGCAACCGAAACCTTTCCT
TATTCTTGCAAGGTCTCGGAAACGGAAAGCCCCCTGCTCCGCTGCGCGTTTGCGGGTTTG
GGAAGGAGCTCGGCCGGAAGGGGAAACGGGCGACGACATGGGGCGTGGGCGCAGCGAGAT
AAAGAGGATCGACAACCCCACGCAGCGCCAGTCCACCTTCTACAAGCGCAGGGACGGCCT
CTTCAAGAAAGCCCGGGAGCTCGCCGTCCTCTGCGACGCCGACCTCCTCCTCCTCCTCTT
CTCCGCCTCCGGCAAGCTCTACCAGTACCTCGCGCCCACCGCCCCCTCGTAAGCCAACCG
CCTCTCAGCTCTCACCCAAATCACCCGCTCATTTGCATGTGCTTTGTTTGTACGTCTGCC
CATGCTTTGCTTGCGCATCTATTGTTCTTGCAGTGTCAAGGAGTTCGTCGAGAGGTACGA
GGCCGCGACGCACACCAAGGTTTGGTCCGACATCCGCCAGGTACGTGAGTAGACTACTTT
GCAATGCTTGGATTCAGGGTGATGATGCGGTTCTGATAGCGGTCCCCCCTTTGCATCGAG
CAGGAGAGGCGCGCCGAGCTGGAGAAGGTGGCCAAGATGTGCGACCTCTTGGAGAAGGAG
CTGAGGTAAGCATACTTGCATACATGGCCGGCCAGCGTGCGCGTCGCTGCGCCTGCGCCT
GCGCCTGTTCTGATCTCGCCGTGTGCTGATCTATTCTGTCGGTAGGTTCATGACGGTGGA
CGACGGGGAGCAGTACACGGTGCCGTCGCTGGCGGCGCTGGAGCACAACCTGGAGGCGGC
CATGCACAAGGTGCGCTCCGAGAAGGACCGCAAGATCGGGGGCGAGATGACCTACCTCGA
GAACATAGTGAGTCGCTCGTCTGCATATTCTTACTTACCGGTGACTCGCCTGATGCT