| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_93403
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_80892 |
1 |
1046 bp |
MLOC_80892.1 |
Available |
Available |
LOC_Os07g36140.1, FRAME:+2, EVALUE:2e-41, 13107.m24468 protein core histone H2A/H2B/H3/H4, putative, expressed |
| MLOC_80893 |
1 |
484 bp |
MLOC_80893.1 |
Available |
Available |
None |
| MLOC_80894 |
9 |
4286 bp |
MLOC_80894.7 |
Available |
Available |
LOC_Os07g36150.1, FRAME:-2, EVALUE:0.0, 13107.m03708 protein formin-like protein 3 precursor, putative, expressed |
CDS Structure of MLOC_80892
CDS Structure of MLOC_80893
CDS Structure of MLOC_80894
Contig Sequence (9169 bp)
>contig_93403 9169 assembly3_WGSMorex_rbca.fasta
TCGCCCGCTCGCCCTTGTCGGCTGCGTGCCCGTGCCCTGCTCCGCCCGCCCCGTCGCATC
CCACCCGTGCCTGCGCGCCCGCCTGGCCGCCGCGCCTGCTCGTACGCCGCCCACATCGCC
TAGCCGCGCTCACCCGCCCCGACTCCCATTGCTGCTGCTCGTCGGCGCGCCGTCCCTGCT
CGTCAACCTCGTCATGGTCGTGGGTGGAGCGCTGTGTGAAAAAGAGGAAAGAGAAGGATG
GGTGAGTGGGCCCATCGGGTTTCAATGACAGGCGGGGGAGCTCTCACATGCAACGGACAC
AACTCGAACAAAAAGTGTCCAAAAAGCATACGTGCGTGTTCGTTCTTAAATTTGATCCGT
AAATGGATTAAACGAACATGAAACGAACAAAAAATGAATATGCTCTTACGTGTTGAGTTC
ATGTCGTTTATATCCATTTTACGTCAAAGACATGTACACGGACAAGACGGGATCGCGGTG
GAGTTGGAGTTAGCACCGACCCCGAAACGGCGAAAAGCCGAGGCGGTAAACCAAAAACCA
ACCGCTCCACGGCTCTTCCCATCCGACGGACTGGATCCCGCCGCTCGCCGCATGTCCTCT
CCACCACGTCACCGATCCGCGCACTCCCCTCGCATTGGCTCTCCTCCTCTATATAATCCA
CCCCCCACCCACCGCTCCTGCCTACCAGCCGTATACCCACACCACACCCCCTCCGCACTT
GCTCCCGTAGCTTCTCGCTTCCATTCCTCAACCGCGGAAACCCTCGGAGTACTGTAGACA
TGGCTGGGAGGGGCAAGGCTATCGGCTCCGGCGCCGCCAAGAAGGCTATCTCCAGGAGCT
CCAAGGCCGGGCTCCAGTTTCCCGTCGGCAGGATCGCGCGGTTCCTCAAGGCCGGCAAGT
ACGCCGAGAGGGTTGGCGCCGGCGCTCCCGTCTACCTCGCCGCCGTGCTGGAGTATCTCG
CCGCTGAGGTGCGTGGAATTCTATTACCCGATGCCTGATTTTGCTGCTTTGGGTGGTGAA
TTCGAGCGGTTGGTGTCTCGTCGATCGGTGGTTTGTCCGCCAAATTGGGGAAAATTTCTA
GGGTTTCGGATGAGAATACTAGTACTATTTGTATCTGTCGCCTCTCACTTTTCTTTGTGC
CTAGGCGGTTCTGCTCGCTAATTTCGCTTGAAGCTTTGTCGAATTTTAGAGTAACCGTTG
CGACTCCCTTGTTTGTGCAGGTCCTGGAGTTGGCCGGGAACGCCGCGAGGGACAACAAGA
AGACCCGCATCGTGCCGCGACATATCCAGCTTGCCGTCCGCAACGACGAGGAGCTCTCCC
GCCTGCTCGGTATGGTCACAATCGCCAGCGGCGGTGTCATGCCCAACATCCACAACCTTC
TGCTCCCCAAGAAGGCCGGAGGCAGCGCCAAGGCCGCGGCTGCCGATGACGATAGCTAGA
TGACGGCTCCTTCTCGGTGGTCGTGGGTGCTCGGCTGTATCTGTGTAGTAGCGTGTTCGG
TCAGAAGGTTGTGGATGTTGTATCTGTGTAGTAGCGTCTGCAGTCAAGTGTTGCCTAGGT
GTTGCGTTTTACTAGGAGTAGTACGTATTAGTTTCTGAATGAATCTGTGTGCTTGTACCG
GTGCTAAACTAGGTGTGGACAATGGTTACATCCTCTGTAATTCGTTGCTACGTTCTATAG
AAGTCGCATCTATGAATTGTTACATTCTCTGCACTTGTCAAATTCTACTACCGTGTTCTT
GTCAAATTTCCACTGTCAATTCTTGCCTATTTTTTCATCTTAAATGTTCGACCAAGGATA
GAAAACGATTGAAATGGTATGGGAGATAAACAATTATCAGTCCACATATAGCAGCCGCTG
CACATTGTTTTGGGTGCCCTGACTATCCGGACGGTGAAGAAACGGTAGGTACAGATCGAG
AAAAGGAAGCTAAGACAGCACAACAGCAGTACGAATACGAATCTGGTACCAGGTCTCACG
CCACATTGCAAAAGGCAGACCAAGTCGCCCGAGGCCAGAGCATACTCACATGACGCGAAC
GCAGGATGTTTCGGTTAAAAGCATGACAATTTACAGCTTTGCTCTCTGCAAAAAGTTTTG
TCAAGTGCAAGCAAAAGAATCCAATGTTTATGAGCCTGTGTGGTGCATCTGTCTTTCTAC
TACTGTACTTCTTCCTCTCCTTTCTGTGATGGTAGAAATGTACTCCTACAGCGGAAAAAA
CAGCAGGTAGTGTCACACTCAGTCAGCCAGCCTGCGGCTTCTTCCTCCCTGTTATGCCAT
GCCCTAACTAAGAGGTCGGTTTTCTTCACCGCCCGCTTCGACGTCCAATTTCAGCTTCCG
TCTCACTTCCCCGTCTTGATCGTGAATATCGCCTTTGTTTGTTTGATAAGAGCCAAAGTG
CAACAATTACCTGCCAAGGACGTTATGGAAGATGGCTGCCTTCCTTCAGCAATTTGATTC
TGTTGCTGAACAAGTGACCAAAGCCAGAGTTTGGATTATCGTCAATTTTTCATCTCTTGC
TTCTTTTTTGAGCTGCAATTGCCCATCTCTTCTTACTAATGTTTTCAAAGAGCAAACCTC
CAAGCGCTGGAAGGAAAAGATAGGTAGAGTACCTTCGTTTAAGTTAACTTTCCTCATCAG
AACTAGAGCTTGAACTATCTGCCCTCCGGTCTTGAATTGCCGGAAAAAGGTTACGCCGGG
GATCTTGAAAAGACTTGGGTGTGTGGGAAGGCAGAGTAACTTCAGTCTTCGTTTTCTTTG
GAGCCACTTTTGATGCTTCTTTCACCTCCTTGCACACCTTGTCAAGCATTGCGAGGAAGT
CTCGCACTACGACAAATAACCGAAGACCCTCATCCTTCCCTGTACTCCCATGGAAATAAT
CGACAGTGCTTTTTACCATGGACCGTGTTTTCTTCTCTTCCTCTAGCAAGAAAGCAACAT
CAGTTTTAGACTGCTCCATGAAACGCACAAGCTTGTGGTGAAACCCACTATCTTCATCCA
GACTCTTCATGCTAGTGTTCAAGAATTCATTAGTTTTACCAAGCCTGTGGCCAACACTTG
CTACCGACATAGTCAACTGGTCTGCATCCAGGATTGCTGCCTTCCTGACATTTTGAAGTT
CATCTCCTAAACTGGACACAACCTGCAGACCTAGTTGTTTGTATTCATCTTCAATAAGAT
CATTGTTATCCACACTGGATACGCCGCCCGTCTGCTCTTTTGCAGCCCGTGCAGAACGGA
CACCTTCAGAATGGATTATCTCTTGAACAACAAAATGCAGCAGCGTTGTCTTCCCATCAG
TTCCTTTGACATCAGAAAGCTTGAGCAGGGTGTCTAACTTGAACGCTTGAGCTCCTCCAC
GGAACGTGCCAACATTCATCCGGTTCCCTGTTTTAAGTACAGCTTCTAGTAACTTCAAGA
ATAGGCGGCTGTTTTTAAGCTCCTCACAAGCCACCTGATCAGGATTTAAATGCCAAGATA
GCAGAGATAAGAAGATCGGTAAAAACATCAAGCTGCAGAAAGAGTGGTAACATTTACACT
AAAATAATCTCCATTATTACTTGATAAAAATGTTCATCTGTAAAAAGGACTAGAGAGCAT
CAAACTTGACTGATACAAGTCATACAGTACAACAGAACTGGATATAGCGTGGAAGCCAAA
TAGGTTACAATGGTAATGCTATTACCTCTAAGGTGGCAAAAGATTGCTTTACATTTGAAG
ATTCCTCTGGTAAACTAGCCATGAAAAGTAATGCATCCAGGCGCTCATAGATATAAGGAA
TGTCGATGATTGCTTTTAAGAACTGCTCTGCAGAACCAAGCTGTGAGAGTTCCCCAGTAT
ATAGTCGAAGCCTGAGCTCCTCATCAGTATTCGGGACCCATCTAATTAAGGTCTGTATCA
AGTCGGATGGAAGTTCATTTCCTACAAATTATTGAGGGAAATTGATAAGGCAAAATATGC
TACCAGAAAATAGGATTTATCAACATGTTCTTTGTTCAAAAATGTCCAAATAGAATAGTC
AGAAGTGTTAAGCTTCATGCACTAGCCAACGCAACCAAGAAACCGAACTGGTAGAAAGGG
CTAGGCAATCCACATATACACTTCAACAAGAAGCACATGAACCCATGCTTGAGGCGTCCA
TTCCAAAATATGGAGGCCAGATGTACACAAATGTAGTTAACTCTAGAACCAAATCTTTAT
CGAAAAACTCTAGAACCAAATGCCGATTTGAGCATTTGACATCGCTTGCGTGCTATATAA
TCTTTCTGACTTTGTTATCAGTTCAAGAATTAGAATTAACCTAGAAGACAAGACTCACAC
CAGTTTAGCACAAATGTGTACTATTTGCTTTGAAAACTAGAAGAAACAAATGAAATCAAG
TGATTCATTGCCCTTAGCACAGAAGAATAGCTGTAACTCCTGATTGTGAAGACACAATTG
ATATACGCAGCTGATATATTATTGCATGGAGTTATAGACCAGAAGCTGGATAAGTATTCT
ATGCATCATTGCAACTTAAAAAAACTGGAGCTTTGCCCAAAAATAAAATAAAATAACTGT
ATCTACAAGACTGGCAAGAATCAGAAGAAGCTGCATTTGATCCAGGAAGAGCTATGCACT
TGCACAGTATAGACGAGTGACAATACACTTTACCTTCCTTAACTGCACAAGAAACTTCCT
CTGCTGAAACACTCAACGCCTTTAATGATATGGCCAGGTTCTGTGCCTTTTTAGGATCAA
GTATCCTGATAACTTGGGCAGCTTCCTTCGATGCTAAATCTTTTTTGGCATCACCACTCT
TCTTGTCAGCATTATAACCAAAAAGTGTTTCAATAGCGTCCTCACTAAGCCTGCGAAGAA
GTATCATTTAGTTATAAAATGGCACGATCTTACAATAGTGGATATATAGCTCAACTATCT
CTACCAACTTACTGGAATGATCCAGATTTAAGGTGATCCCACACCATTGATTTATTAGCA
TTTGCTGTTACTTTATCCCAAAAGAAGGGCTTAAGCTTTGGTTTAGGTTCACTAGAGTCT
GCATCTGTGTCTGCCTTATTGCCTGACTTCATAGGTGGTGGTGGACGCGTTTTGGAAGAA
GCAGGCAGCGTTGGTGGTGGCGGGAGAGGTCCGCCAGATTTTGATGGTGGTGGTGGTGGT
GGTGCAGCTTTTGGACCAGTAGGTGGTGAGGGTGCCGAGGGAGGAGGCGGGGAGGCTTTT
GGAGCTGGTGGCAGTGAGGGTCCAGAGGAAAGAACTGGAGAAGCATTTGGAGGCGGTACA
AGTGCTTGAGGAGCTGTTGGTGAAGGAGGAGCCTTTGGTTGAGGCACAAGTACTTGAGGA
TGTGTTGGAGGTGGCATCATTGGTTGAGGCATTGGTGTTGATCCTTGCACAGAACCAACA
GAAGCAGCCATTGGCTTGGCGGAACTGCTGTAGATTGCTGGATCAGTGTTTGCACTTTCC
GGCGAAGTTAGCTTCACATGGCTATTTTGGCCAGTGCTTGGATCTTCCTGTGAGCTTAGT
TTCACATGGCTATTTTCACCAGTGGTTGGTTCTTCCTGTGAGCTTAGTTTCACATAGCTA
ATTTGTCCAGTGTTTGGGCCTTCCTGTGAGCTTAGTTTCACATGGCTATTTTCACCAGTG
GTTGGTTCTTCCTGTGAGCTTAGTTTCACATAGCTAATTTGTCCAGTGTTTGGGCCTTCC
TGTGAGCTTAGTTTCACATGGTTATTTTGTTCAGTGTTTGGGCCTTCCTGTGAACTTAGT
CTCACATAGCCAATTTGATCAGTGTTTGGGCCTTCCTTTGAACTTTGATTCACATGGCCA
TTTTGGCCAGCCTCTGACTGTAATGGCAATGCTCCCAGCTTAGTGATATCTATTAGATTT
ACACTGGAAGACTTGCAAGAATCCGCTGCAAATGAAAGCATAAAAGTTAGTGGTAGAAGA
AAGAAAAAACTTGACTTCTAGTGAAATGGATGATACGAGACATTACTTAGATTCACGAGT
TGCTTATTATCATAGGCAGAATCCTCGGAACTCTGGCTTTCACGGTACATGCAGCAGCCA
ACGCAGAGAAAACCTAAAACTGCTATAACAACCAGGGACACACCAATGACAGTGGTAATT
TCCATGCCATCACTGTCCTTTTTTTCTACTGGTTTAGTTGCAGGCACTGCCTTTTTTGTA
GTTGCTTCTGATGAAGCACTGTTAGTTGATTTCGCTGGCGAAGGTTTTACTGCTTCATTT
GCAGGAACAGGTCCCGGAGTCAGTTCTCCTCTCATTGAGGCGATAAGTGTTTTGATATAA
CCATCGGGTAGGGTTTTTGCAACCTCAAAACTCTGTTTGCTTAAGCATATCAGCAAAGTT
TGCTTGATTTCTGGTGTCAATGGGCTGGCGCCTTTTTCAATGACAGGGGAAGGGCCCTTA
TTGTCAGATATCCTATGGATGATATCAAGTACATGCTTATAGTTGTAGTAGTTTCTAACA
TCTTGAAGGCTTTTCTTGTCCAATCCACATTGGAGCCACGCGTGTTCCACCTATAGATAT
CGTAACGAGTGGTCACCCTTGTCAGTACATGAAAATTAATCAGTAACAGATGCTAATGAG
ATAAACTGGGTGTGCATCCTTTTCAGAATAATAATATGATAAACCAGGCCATTAATAAAA
ATATAAACTACCATGAACCAGCGAGAGTCAGCAGTTAGAAACTATTCCCTCCATTCACAA
ATATAAGATGTTTTCAATATTTCAAAATGGACTACACACAGACTAAAATTAGTGAACAAA
CACACTAAAACATGCCTATATACATCCGATTCAGAAAAAAAATTAGAACATCTTATATTT
GTGAACGAAGGGAGTACAAATTATTATCCCATAAAATTCCACGCTGAAGATTACCTGCTG
TAAAACGTTACTAGTATGTTGGACTAAATATCATATTATCATCACATTCCTTACTTAAGT
CTACATGCATCGTACCAATAATAACAGAATTAATCTGACACATGCTACTCATCAAATAAG
CAGTAATAATTAAAAATTAAGATATCATTAGCGCATAAAGATGTTCGACCAGTGCAGTGA
TGTGTACCTAACAGGAGGGAACATTAATAATTTGTTTCAAAATCTCTGCTTCTGCTTGCA
GGGTTTTAATCTGTACGGTCAGTATTTTCAATGCAGTAAAAACCATAAACAATTTTGGCC
TCTGGGAACCCTAGAAATTCAGTGATCTCATCTCTTCTGTCACAGGTAATTCGAAGAGCA
CCACATGACAGTTCTGAATGTCGGCATCATGAGCTCATACATGTGGACCCTATGTGTTGA
TAGAGCGAGGTCACCAACATAAACACCATATCAGAAATATAGCCGGGCAATCCTTGCAAT
TCTATCATTCTATGATCTCGATGGTGGCAATTCCTGCCTTCCTGAACCGGTTTTTTCTCT
TGCAAAAGGATTGATACTTACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGGTTTCA
CTATGAACTACATACGGAGCANNNNNNNNNNNNCTACACTCTAAAATATGTCTATATTGA
TTTGTATGTAGTTCATAGTGAAATCTCTAGAAAGACTTATATTTAGGAACGGAGGGAGTA
GGAATTTAATTCTCACTTCTTAAGATGGCCCAAACTAAACTACTTTGCTCTTGACCACAA
GCTATGGAATGACACCATCTACTCCAATACAGATGTTACTACCGAGTGCGATGAAATACA
TGGAAAATTTACTCACCCAATCGTCTACTTGCTTGATGAAGGTTGGTGTCAGCGCAGGCG
GCGGCAACGTATCGCTTGCGCCAATGAGCAATCGTCCGCAGGCCATCGGTACAAAGAGCA
GCACGGAGATGATGCACCGCGCGGGGAGCCATTCTCCCCTGCAGCGCCTCATCTTTTGCC
TGCTCCTTCCTACACCGACTCGACCATCGCAATGTGATTCCTCCGGCTTACCGGCGGGAG
GTTTGTGGCGACGGACAACAAATCCGTGAGCTCCCTGAAGCAATTGGCCAACGAAATCCA
GTGAGGCGGCACAAATGTTTCGACAAAAAAACACTCGGAATAGCGCTTTCTTGGAAGCTT
ATTTCCGAAATGCCCCGCCCAAGCTCGCGCAAAATCGCGGCAATGGCCTTCTGAAATCAG
ATGCCTCGAGGTGCTCCGAGAAACGCGCCGATTTTAAGGCGAGATGGCTCATTAATAATC
ACCAACGGTGGGGGATTTGGGGGGCTTCCGAGGCAGAGAACCGAATGCGCAGCGGCATTG
GCATGCCCCCCAGATCGAGGAAATCCGGAGGCGCAGCCGGAGAAATCCGCCGGCGCTTCA
ATCGGTCAAGAAATGAGCCGCAAGAACGCGGGGGAGGTTAAAGAAATCACACAAAGAACA
GGTCGGAAAATGCACCAATGCAAGGCACCACCAAATTCGCGGCTGGAAGAGCCACGAATT
TGGGCGTGATCTGGAGCTACCGAGGGGACCAGCGAATCCTTTTCGCGCGCGCCCTCTTTC
TTTTCTCGTCTCGACGCTGAAATGGAAGATGGAGGAAGAAGCGGGGAGGAGACAGAGAGA
GAGAGAGAGAGAGACGTGATAAGTGCATACTCTTTTAGATAATCATAGAAAGTTACTTTC
AAAAAAGGAGAATCGTACTAGGAGTAGAAAGTTATACACTTGCATGCAACTTTGTAAATT
ATTTCTTTTCCATTCGTTCCATTTATGTTTTTCTCAAACAAATTAGGCCTCCTTTGACTC
ATATGATGGAAATATCATAGAAATAGGGAAAACATATAAGAAGTGAAAGGACATGTATCT
CACTACTTATAGAAAAAGATATGTCATTTAATGCATAAATATGATTTTTTTATTGAACCG
AGACTAATATTTTTTTTCTTTGGGATGTGAAGGATTAGTTTCTATCCTACATAGAAATAT
GAATTCATTCCGACAAACTAAACGGCTTCAAAGGATTTTTCCTTTAAAAGTCTCATGACG
GGGAGATAACCCCGGTGTAGGCTCATCAAGCATACTCTTCTATACTTTGGTATAGAAAGG
ACAATAGCTTCCTCATCTGTCGGCTCCTCCTGGCTGGCTATGAAGTACTTGCCGGCTAGG
AGCGTAACCGGCTACTCTGTGGACAGCTGGCCAAGCCGCCAGCCGGCTG
