Map Locations of contig_93310 (3267 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_93310

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80875 1 1446 bp MLOC_80875.1 Available Available LOC_Os02g54160.2, FRAME:-3, EVALUE:3e-91, 13102.m12340 protein AP2 domain containing protein, expressed





CDS Structure of MLOC_80875






Contig Sequence (3267 bp)

>contig_93310 3267 assembly3_WGSMorex_rbca.fasta
GTGTATATCATTTTTGGGAGAAATATAACATTGGTATAACATTTCTCTTTAACCTACCTT
AGGTATATCATTTTTGGGATGTATATTTCTTTGGTATAACATTTCCGTACATTGGGTATA
TCAAGCATGTCGTCTCTATTAAATTATATATTTTTATTTTGAAAAGAATTAAATGACGAT
AATGCATGGATGGAAAGTTCTGAATGCATATATTGTTTGGAAACAAATGGATGCATGCTA
GTATCACATATGGAAAATCTTGCATGCAAAACTTAATGGGTTTGAATCCATGATGCATTA
ATAAAGAACCAGCTAGGTGCCTAGGCACCGAGGTGCTATGTTGTTCACATTCACAAATGG
TAACGACGACATAAAAGTTCACAAAACATAAGGACAATTGTTCAGCATAAATGCCTTCCA
CAGAGACAATCAACTAGGGAAAGGTTCTATTACACAAGAGACACGGGATGCAACTATATT
TTGCATATAAGCTTGGACATGAGCACACTAGCCGAAGGTGACAATAGGGCGCTTCCCGAT
CTCCCGTAGTTTTATTCCTGAAACAACAGCATAAGCAAAGTAATGAAAAGACTATAAACC
TCAGACTGAACATGAAATTTTGCAAATGCTTACTCTTTGTCCCTGTATACAGGGTTTGAA
TCCCTCAGAAAAATTCACCACCTATGGGCATGTCATCGAAGCTCCAAAGGTCCATGTTCA
CAATGGTATCCTGGGGTACGTCAAAATTCAGAAGGCTACCAATCAGCTTATCAACGCTGT
CATCCAGAAGATATCTCATCCAAGGTTGAAAATTCACAGCATTATTCTCCATAACATGAG
GAACCATAGAGTCGTAGGTATTGTTCTTGACGAGCGCAGATTCTGCTCCTTCAGCAATGG
TAGAAGTGGGAGCAATGGATGATATATCTGGAGTTTTGGCGTCATACTCCCAGCCCAAGT
CATAGGAGCCAAAAGAGTTGCTTCCCTGGTCAGAGTACATATCCATAATATGAACTTCAA
CAGGGGCAGCAGAGTTCATTGCGGGAACAAGTGGTTGGTTTGATGCAAAGTCAGCTGATC
TTGTTGGTTTCTCTGTAAAGTTAACCTTGGCCTTCTTTCCATGTATCCTGCATGCTTCAA
CATCATAACATCTTGCAGCTTCTTCAGCACTATTGAAAGTACCGAGCCAGACATGGACAT
CCTTGGTAGGATGTGTGATTTCAGCAGCCCACTTACCCAAGGGGCGTTGACGGATACCCT
GGAATTGGTTTTTTCTCTTCCTTGTTTTTGGCATTTCTGAAGGACCATCAAAATCAGCAG
TAGGCATGGTGCTTAAGTCATCTGCAATGGAAGATGAATGGCAATGCTAAGAGGGACCAA
CACAGACAAATTTCTCTCACATATAGTAAATAATTTGTCATAAATTTCTATGTAAAATAT
AATGATTGTAATGAACACTAAACCATGATGTGTCAAGTTCGAGCGAATGCATAAGTCACC
AGAAAATAAATAAAATAAAATAAAGATCACAAGTTAATAAAAACAAATCCAAGGTTCTGA
TAAACATATATCATGTTATAGAACCTTGACATTATTCTGCAATTATTAATCTACAAATTG
CATTATAGATGATGCGGAATCAAGGATATGTTTTTTAAGTCGGATTCAATTTTTAGAATA
ACCATTTAGACTGATAAATTAACCAACCTAGAACAATCCTCACGCACACTTACAACCATG
TGAGGAAACAATTCAAGAGAGGCCCCGATCTTTGCGGAAATAGCCAACCAACCAAACACA
ATAGAGAATGGAAAAATCCTAACCATTCACAAAGACCACTCCATGAAAGCACATACAATC
CAAAATCTCTAAGCAAACAGGAGTAACCCGGCCCAAACATAGCCTTCCAAACAGCAACCC
CTGCACAATTTCTCATCCTGCCCAATCGAACGACCAAGCCATTTTCGACCACTCACACAA
TCTCCTATCTTCTACTACCTCCATCATGGTTGACTAGTCCTTGTTGTATTTTTGGGTCAT
ATTTTTTACCACGACTAAATAATAAAATATAAGTTAAACGTAGCGAAAATAACATTAAAA
TTACACTACAAAAAGAATCCAACAATATAACTTTTCATGACATGCATTAACATTTTACTA
GTTAATTATGTGGTCATACTTTGACCTAAAATACGATGGAGACTACTAAACCAAGACGGG
GTTAATACAACAGTTAACCGCCAAAGGTAATGATACCTAGATTAAAAACTAGTCCATGCT
ACCCGGGCCGATACCTTGGAAGAGGGATCTATTAAAAACTAGTGCAAGCTACCCAGGGCC
AATACCTTGGGAGAGGGATTCGTCGGTGCCATCCTTCTGAGCCACCCCACCACGCACCAA
CTCCAGGTTAGAGTCCCCAAAGTCAGCCTCGAAGTCCTCCTCGTCATTATCCATCCCGAG
TCCCTTGCGCCGGCCATGTCCAGTGAAGCATCGGTCCCTGCGGCTACCCCGCACGGGCTT
CTTCTTCTCAGGCAACACCGTCACCTCCATCACGTTCCGCGTTATCGCAGAAATCTTGCC
GTTCGCAAGGGGCACTCTACCGCACATGATAGCCGCCGGTACGTACCTCGCCGAAGTCAT
TGTCGGGGGGAGAGGCCTCGCTGGAATTGGTAAATGGGCGAAGGTTTTAAGTAAGCAGGA
CAGAAGGTGTGGGTTGGCAAATGGGTGTGAGGCCACTCCTTATATACACGGTGGTCGTGT
GACGATGTGAGAGGGCACGTGATGGGGCCCACGCACCAGCGAAGGGCCCCGCTGTTGGAG
GAAGCACGAGGCAGGTTCCGAAAGCAAGCATTTCTACTCAAGGGAATCTTATGCTCTTGT
CCCTCAGGGGAAGTGTTATTTCTTGTATTTCCCCTTGAGAATTAATGGATGGATGTATGT
TTGACTTGCTTTCTGTGAAGGCATAGCCAACATTTATTGCTCAAGATTGTTGTACTACAC
ACATGTAGTACGAGTCTACTACTACTGTCATACACTCTTTGATCGGGTTTATTGGATAGG
TTCATCCAACTTAACGTTTAAGCAAAAAATCTTCTCATAAATGATTTTGTGAAATGCTAA
GATCTTTGCAAATCACTCACACCTAGTTAGGACAATTATTAGCTCAAGATTATACTACAC
AACTTTAGTATGACTATACTACTACGGTTGTACTTCTTGGTTCAACAGTATTGGACAGGT
TCATCCAACCAAATGTTTAACCAATAT