Contig Data
morexGenes
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Map Locations of contig_932491 (1173 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_932491

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80865 1 946 bp MLOC_80865.1 Available Available LOC_Os01g72049.2, FRAME:-3, EVALUE:5e-18, 13101.m07849 protein retrotransposon, putative, centromere-specific, expressed





CDS Structure of MLOC_80865






Contig Sequence (1173 bp)

>contig_932491 1173 assembly3_WGSMorex_rbca.fasta
CCACCACATGACATTCCGAGGTATCTTATCATAGTCCTTCTCCAAATCAATGAACACCAT
ATGAAGGTCCTTCTTTTGCTCCCTGTATCTCTCCATCAGCTGTCGTACCAAGAAGATGGC
TTCCATGGTACACCAATTTTCTTAAGGAAAGAGGAACCAAATTTTGAATCAAAAGTAAGA
AAGTTGCACTAGTACAGCAGAATGAGCAATATTTATTTATTTAGTTCGATTGGCAGAAAT
CTTCACAAGACACGAGAAGGAAGAGAAGAGCATATCAACGAAGGCCTACTAAGTCATGTC
ATCATGAAGTAAGCATAAGCATATCAGTTCATCAAATGCTAAATCTTACATATATCTAAG
ATTGCATATTCAGTCGGGTGCCTTTGATAGCATCATGAGATTCATTCTCACAAGTGATAG
TAGTGCAATTACCCAGGATTTTGCCATTTTATCAGTAATAAAGAAGGTATGTACAAGGTA
GGAGAGCTGCTGGGCTCCAAACACACTCAGCGTGCAGGATAATAAGATTACCCTTTTTTT
ATGCTTAAGCTTCTACATATAACAGGGGAAAGCAGAACACAGCAGTACAGTACATACAAT
AGATGTATACCTGAATATTTGCTTGGCCATCAGTATGTTTGAATGGCGGAACATCTCCAG
TTAATTGCCCAGACACATAGACAAGGTCATTTTCTTGCAAGTGAGAAGCAGCTATTTGTG
CCAGGTCGTCTTGAAAGATTACGGGGATCCTGAAGGTAAATAAGTGGCAAGTGCACGCTG
AGAAAATGCAGCGATACACTGGAAATAGAGATGGATACTCACACACAAAATTTCTCCAGG
ACACGACGACATAAAACTAGCCAAAACAAAATTGCCTATCAAAAGACTTCAAGAACTGGA
AATATAAAAGTCTATTAATGCTAGTCACTGACACATTCAGAACTTGCAGTGACCCCTATC
AATTTGGATTCAATTTGGTGGTCAGAGTTAACAGTGTCTAATCACAAAACCTCCCACTAG
ATACTTAATTTGATCTAACAGCAGAGCTACCTTCAACTTGAAACATAACAGATACTCCCT
CCGTCCCAAAATNNNNNNCTTAGGTTTGTCTAGAAATAAATGTATCTAAATGCTAAAACA
TGACTAGATACATTCATATCTAGACAAATCTAA