Contig Data
morexGenes
Links



Map Locations of contig_92841 (4979 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_92841

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80797 1 241 bp MLOC_80797.1 Available Available None





CDS Structure of MLOC_80797






Contig Sequence (4979 bp)

>contig_92841 4979 assembly3_WGSMorex_rbca.fasta
GTCAGCGGCAAGCCCTCGACTGGAGCATACTGCAAGATCGATGAGTGTTGTTGCGCATAG
CATGATGCTTCTATTATTGCTCGAGCAACAATTTATTGCAGCTTCTTATAAATGTAATAT
TGGTTACCGAAAAAATATCAGTTGAGTTTTTTTTGTTATGCTGTCCCGATCTCTTTTTAA
AATCGAAGGTAAAAGTTTTGCATCAGTTCATCAAATAAAAAGGAGAAGAACAAGGTTTTT
GAAGGCAATTATAGGAGGACCGCACACGTGGAAAGCAAGGGATTACTCTCTCGGTAAAAT
GGTGCCGAAAAATCTAGCTCCTGCCACTATCCAAGTTTTTTGCTTCTTCTCTAATCTACG
CCACTATGCGACTACGCATAGAATACTTATGGTTGAAGACCTTAATATTTCTTTCTTTCC
AGATCTCCTAGCAAATCAGCATTTCTATGAGTGCACCGCCTTCTTTGAGTTCTCTGGTTG
TCCTTGGCCCACATTCCATCATTGCGTGACTGTGTGAATGTCGCTCCATGTAGGTGCCGC
CGACTGCCAGCCAAGCCAAATGTAGATTGAGTTTCACACCCTCACTGTGATTGGTGAGGA
GAGTGCTAATTAAGCGCATGGCACAAATATCTTGTGTGGACAATACTCCACATAAACGTG
TGTTTTGCCTGTTTATTGCATATGCTCTTCTTCGTGCTCCTATGCTGCTACCCAAAATCA
ACAGGTGGATTGTTTGGTTACACAAGCAGTCAGTGGTATAATCAAAAGTAAAGATTGAGA
ATCATATGCACTGGTAACAGGTTCCTCCTTGAGATCATAACAAATGTATGGTTGCATCGA
GGTCCACCATGCATAGATAATATCTTGCCTCTCGATTGTAACCATCCTCGAAATATGCTT
TTGTCATGCTTTATATATAAATAAAACATCCATACACACCAATCTCAGAAAACTTGCATA
GAGCCTGCTCGGACCCACAACATAAATACGCCCAACGAAAGCAAGAAGAAACAAAAAAAA
GCCACCTAGTGGTAGACTAAAAAGCTGATGAGCGAGAGGAAAGCCTGTGAGTCGAAGCTA
GAAGTGCACCCAAGATGGCGTCGAGGCGGTCGCAGTCTCGCTGCCTAGAGAGCGGATGCC
GGTGCTGCAAGAAGGCAAGAAATTTGAAGAACGAGTCAGAAGCCTGTCGCAGGAAGATCC
ACTCAATCACTATTTTATTGCGTGTAGTCCAAAGGGTCCACGTGAGCGCCGCAAAAATAA
GCTAGAATAGTCGACGATTGTACCCTCTTTGGGTGGCCCTAGATTGTAGGAACTTTGCTT
AATCTAGGACCTCCGAGTCTGGTCCAAGGGCCTCGTGCACAAAGGACCATAGGGCTTGGA
CCGTGACACAAGAGAATAAAATATGAGCTCCGGTTTCCGGGACGTGACATAGGGGGCAAG
TACCATCCTCCGGGTCGTGTCGCTTAAGAACCTCTGTCCCAGAGGGAAGGCGGTCACGAA
GGAGCTGCCAAATGAAAATCTTGATTTTTAGGAGTAGTGGGGCCTTCAAGAGAGGGGACA
ACAATTGAACAACAAGACGGGGACTGAGCGCTTGATAGGTAGAACTCACGGAGATTTCTC
CCGAAGGAAAGAGACTCCAGGAAATAGAGTCAGGGGTTTGGGACAACAGAAGAGGGACTA
CTTCCCTCAAGCCGTCCAACTCATGCACTTCAGCCGGTCCAAAGGAGTGGCAGAACGCGA
TGTTTCACTGCCCGTCTAGATTGGCTTCATAGATGAGGAGCTCCACGTGAACATAGATAG
CAAAGAGCCTAGGAAATTGAAAGCGTGGCGGTTCTCCGTGCAACCAGGGGTCAATCCAGA
ACTGGGTGCCATTCCCATTACCGACTTAGAAGGTAGCACCAAGTCAGATCTCATCCTTAA
TAGCTTGGATGGACCTACTCACCGCCGTGTAGACAGGGAGCTCCTACTCACCGTCGTAGG
TCCCGTTGGTGCTCGTGTGCGACGCGCGGCGTGCCGGCCCACCAAGGTGCTAAAGGGCAT
ATCACGCTAGCATGGCTTGCAATTGGTTGTTATCGTGCAACTTGCGTCCAATTAAATCGC
TAGCTTGTATGGGAGCTCCGTTGGCGCTTCTGGCCTTCGCGCGCGACGCACGGCAGGCCG
GCCTAGCAAGGTGGTAAAAGGAAAAATGTAAAGGAAAAAGTACATGTTTATTTATCTGAA
TTAGGAATCGAACCCCGCACGCTAATTTGAGTACCATGCACGTCAACCACGAGGGCAACA
TCACTTTGCTGTTTATTAGAGGAAATAAGTTTATTTGACCCTTCTTTTATTATGGACATT
AAATATATACCATCTATAAATTATTTGAATAAAGCAAACATAAATTTGAAAAGCATTCAC
AAGAATTACAAATTGAAAGAAATCAAAATTTTGAAAAGGTTAGTACCAATTGACAAACGT
GTGCAAAAATGGAAAAAATTTGTGAATTTGAAAATAATTCATTTAATTTGGAAAAATTTG
CATCAATTCTGGAAAAGTTCATCAAATTTGAAAAGCGTTCATCAATTTTGAAAAAATTCA
CCGACTTTCACAAAAAGTTCATCAACTTCAAAAAATAGTTCATCAAATTTTCAAAAAGGT
TGAAAGAAAAGTTCATTGTCTTTGAAAAAAAGTTCATGAATTGAAAAAAGTGTACATTGA
ATCTGAAAAAAGGCTCACATATTTGAATAAAGTTCATCAACTTTTTAAAAAAGTTCACCA
ATTCGAAAGAAAGTTCATTGATTTGAAAAAAAAGTTTACCAATTTGAAAAAGGCGCATCA
AATTTGAAAAAAGCTCATCGATTTTCAAAATAAGTTCATCAACTTTGAAAATAAGTTCGG
CAAATTTCAGAAAAGTTCACGTTTTTTAAAAAAAGTTCATAAATTTTGAAGATAATTTGT
GGAATTTGAGAAAGTTCATCGATATGGAAAAAAGTTCGTTGAATTTTAAAAAAGCTCATT
AAATTATAAAAATAGTTCACAAAATTTGAGAAAAGTTCATCACATTAGGGAAAAGTTTAT
TGAATTTGGACAAAAGGTTAACAAAATTTAAAAAATTCATCGATTGTATTATATAAAACA
CAAAAATGAATCTTCGTCAATTAACAAAAACATATTTTAAAAAAGAACAAAAATAAAAAA
TAAAACCCAAATCAAAACCTCCCCGAAATGACCACGAACCAGGAAAAATCGGTTTGGGAA
GCTTCTGGAAGCTTACCAAAATCATAGGATTCCTCAAACGTAGAGAATAAAGAAAGAAAG
CAACATAAAAAACATTTGAAATAGTACAGGAATATATGGGCCGGCCCAGCTCGTCAGCGG
AGTTGGTGCGCTGCAGGTATACGTCTCTAGACGGTCGCTTAAGCACCAAATAGGAAATCC
GTGTAGATAACACAAACTAAACAGGAAAATATATCGACTAACACGTTATATAGTCTGGGC
GTAAAAAATAATTCCAAAGATGCATCAAAACGTTGAGGATTTCGTTGCATTCACCTCCTA
AATAAAAATATCAGTTGAGTTTTTTTTGTTATGCTGTCCCGATCTCTTTTTTTAATCGAA
GGTAAAAGTTTTGCATCATTTCATCAAATAAAAAAGAGAAGAACAAGGTTTTTGAAGGCA
ATTATAGGAGGACCGCACACGCGAAAAGCAAGGGATTACTCTCTCGGTAAAATGGTGCCG
AAAAATCTAGCTCCTGTCACTATCCAAGTTTTTTGCTTCTTCTCTAATCTCCGCCACTAT
GCGACTACACATAGAATACTTATGGTTGAAGACCTTAATATTTCTTTCATTCGAGATCTC
CTAGCAAATCAGCATTGCTATGAGTGCACCGCCTTCTTTGAGTTCCCTGGTTGTCCTTGG
CCCACATTCCATCATTGCGTGACTGTGTGAATGTCGCTTCATGTAGGTGCCGCCGACTGC
CAGCCAAGCTAAATGTAGATTGAGTTTCACATCCTCACTGTGATTGGTGAGGAGAGTGCT
AATTGAGCGCATGGCACAAATATCTTGTGTGGACAACCCTCCACATAAACGCGTGTTCTG
CGTGTTTATTGCATATGCTCTTCTTCGTGCTCCTATGCTGCTACCCAGAACCAATAGGTC
GATTGTTTAGTTACACAAGCAAGCACTAGTATAATCAAAAGTAAAGATTGAGAATACATA
TGCACTGGTAATAGGTTCCTCCTTGAGATCATAACAAATGTATGGTTGCATCGAGGTCCA
CCATGCATAGATAATATCTTGCCTCTCGATTGTAACCATCCTCGAAATAGGCTTTTGTCA
TGCTTTATATATAAAGCAAACATCCATACACACCAAGCTCACAAAACTTGCATAGAGTCT
GCTCGGACCCACAACATAAATACGCCCAATGAAAGCAAGAAGAAACAAAAAAAATCCACC
TAGTGGTAGACTAAAAAGCTGATGAGCGAGAGGAAAGCCTGCGAGCCGAAGCTAGAAGTG
CACCCAAGATGGCGTCGAGGCGGTCGCGGTCTCGCTGCCTAGCGAGCGGATGCCGGTGCT
TCAAGAAGGCAAGAAATTTGGAAAACGAGTCAGAAGCCTGTCGCGGGAAGATCCACTCAA
TCACTATTTTATTGCGTGTAGTCCAAAGGGTCCACGTGAGCGCCGCAAAAATAAGCCAGA
ATAGTCGGCGATTGTACCCTCTTTGGGTGGCCCTAGATTGTAGGAACTCTGCTTAATCTA
GGACCTCCGAGTGTGGTCCAAGGGCCTCGTGCACAAAGGACCATAGGGCTTGGACCGTGA
CACAAGTGAATAAAATATGAGCTCCAGTTTCCGGGACGTGACACAGGGGGCAAGTACCAT
CCTCCGAGCCATGTCGCTTAAGAACCTCTGTCCTAGAGGGAAGGCGGTCACGAAGGAGCT
GCCAAATGAAAATCTTGATTTTTAAGAGTAGTGGCGCCTTCAAGAGAGGGGACAACAAT