Contig Data
morexGenes
Links



Map Locations of contig_92073 (5964 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_92073

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80671 1 1428 bp MLOC_80671.1 Available Available None





CDS Structure of MLOC_80671






Contig Sequence (5964 bp)

>contig_92073 5964 assembly3_WGSMorex_rbca.fasta
ATTGCAACATCTTCAGTTCTTCCAATGTGGCATCACGATCCGGTTCTCTTCCTTCTCCAA
AGAAATCACCTTGCATACCAACACGAACAACAGCCCAAACGGCAGGATTGTGACCAAAAA
TATGCATTTTCATTTTATGCTTCCAACTAACCAAACTAGTGCCATCAAAATATGGACCTC
TATTGTGATAATTTCCCTCACAAGACGCCATACTCTCCTAGGTTGTGANNNNNNNNNNNN
NNNNNNNAAAGCTCTCATACCACTTGTAGGATTGAAAGTATGTCTAGAAGGGGGGTGATT
AGACTACTTGACAAGATAAAACTTAGCCTTTTTTTCAATTTAAGTGTGGGTCAGTTTACA
TGGGGCTATCTAACATTAGACATTCATGCAGTTATTTTTTATTATTTATATATTCTAGCT
CTATGGACAGTAGTAGCATTTACATATTCTAGCTCTATGGATAGTAGTAGCATTAGCGGA
AATGCAATTCAGCTCCCGGAAGCACGTGCTACAGCCCATGTAAAATGAATTTTGATATGT
CAAAAAATTCCAACAAAAATATTATATGTTGTTTGTCACGTCCAAATGCTACCTGGAATT
TTTTAGGCAAAAAGGTTAAGCATTTTCTTGTGTGCAAAATAATAATAAAACATCAATAAT
GTGACACCCAAATTTATTTATTTCACTAACAAAACACCACTACTCTGTTTCGCATGAAAA
TAGTCAAGCATGCTTGAGGCACTAACATGAACATCTATAAAAAAATCATAATGCTTTGAA
AATATTTGCTATTATTTTTGAAATTACTGTTCATCCGGATGCAAATGCACCCGAGATCGC
CCTCATTCCTAACTAGTAGAGGCGAGCTCGCCGTGTGCGGTGTGCACCATGGAGATTACA
GAAGCACGTTGCACCATGGAGATTACAGAAGCTAGCCGTGTGCGGTGTGCTAGACGAGGC
GAGCTCGCAACATGTCATAATCAATTGCTCGTTTTTTTTCTTAGACATAATCGTTTGCTC
GAATGGACATTACTGTAATTACGCGTAACAATCGCTACACTAGTAGTAGGAGTATATAAT
TTAGTAACACCACGCATCGCACATGCGACGATATGTGTCAGCGGAGGTAGAAGCCCGAGG
CAACAAGTGCGGGCAGCAACAGCGTGCCACACATATGGATCGGAACACTAGTACTAGTGT
CATATCTGAATGGTGATGTGCCTGGTCTCGTCCCCTGGAGACAGCGAGAAGGTGGCCTGC
TTGGAGGTGTTGCCGGCGTTGACGGTGACGACGTACTCGCCGAGGTAGCCGCTGAAGCTG
TAGGCGCCGTGCGCGTCCGTCGGGCCGGCGACCTGCCCCGTCTGCCACTCCTGCAGCAGG
CGGTCGACGACGTCCCCGACGGGCAGGTTCTTGAGGTTCCAGTCCGTGAGGCACATCTGG
TAGCACCCGCTCTCGTGCAGCGCCGTCCAGAGCATGACGCCGCTGACCGCCGGGTGCGCG
TACGCCTCCCGCAGCACCTGCTCCAGGTACACGGCCTGCGTCTGCGCGTCGAACTTGTTG
TTGATGTCGATCTCGGTGAACCAGATGGGCAGGTTGAGCGTGGCCAGCTTGTCGAGCACG
GCCCTCATGTAGGGGATGTTGGGCTTGGAGAAGTGTCCCTCGAGGCCGATCCCCTCCAGC
ACGGCGCCGCCGGCCCGGAGGTCCTTGAGCCGGGCCACGTACGCGTCGACGGTGGAGGAG
GCGTCGTCGCAGGTCTCGACGACGTTGTACTCGTTCATGAAGAGCGTGGCGAGCGGGTCG
GCGTCCTGCGCCACGCTGAAGAAGTCCATGGTCGCGTTGGGGCCCAGCCGCTGCTCGTAG
AAGTTGAAGTGCAGCATCTCGTTGTTCACGTCCCAGTGCGCGAACTCGCCGCGGTACCGG
GTCATGAGGCTCTGGATGCGCGTGTTCACGGCCGACCGGAGGTCCTCCGGCGACAGGCCC
TTCACCCAACGGGGCGTCGCGTCCTGGTTCTCCCAGAAGATGTTGTGCCCGCGCACCATC
ACCCGGTGCGACCGCACGAACGCCAGCATCTGGTCCGGCACGTCGAACCGGAGCAGCCCC
GACGCCGGCTCCGTCGAGTACCACTTGAGCTCGTCCTCGAACACCGCCGCGTTGAACCGC
TCCACGAACCATTTCTGGTACGCGTCGTTTCCCAGGATGGTGGAGGCGATCGCCGACCCC
AACGGGAAGTCCTTGGCGGTCTGCTGCACGGACACCGACGCGCCCACCACGCGGGTGCCG
TGCGGGTCGGCGACGTGTATGGTGGCCATCCTCTTCCTCCTCTGCTTCCGCCCAAAATAA
AAACACACATCACATTACTCCCACTCAACTAACTACTACCACTCTACCAGGGAAGGTCAA
GTTGGCACAAGAAGACAGCAAGAGAAGTGTACCTTCCGGATCGTATCTTTCTGGTGCATC
GACCATTGATCCGTCGTGAACGGCTGGAGCGAGCCGCTCGCAATGGTGATCTTCATGGGG
GTCCTATCAGCATTCTGAAATGCAAAATCAACAAGGGGGTAACAAATCAGGCACCACGTT
TCAGCAAACAGCCTCTCCCGAGAGGCACATCACATCTCTCGGATTTATCATATATGTGCA
CCTGAAAGAAGATGACGGAGGTCTGAGTTGGCCAGTCGAGGACGAAGCCACCCTTTAGGA
ACGCCCAGCAGTCGCTCCTGGCGAGGACCGTGCCGATGCACCGTGTGCCGGAGTTGTCCG
GGGCCAGCCTCGCGGTGATCAGAGCCGAGGAAGAGCCCTCCAGCTTCACCCAACCCGAGA
AGGTGTACATTGTGGACTTGTTGAGGTTGTAGACCACAAACGCCGGGGACAGGACGCCGG
TCTCCGTCGTCTTGTACCCGTTCGGGTCCTCGCCGTTACCGTACTTCAGAATCCCGCCGT
TGTACTGCGCCGGCTCCGGGTGACCTCTGCACTGAACGCCATGTACAACGCAAAGATGAA
AGATTTAATCACCACCACTAGCAACTTATTCCACGAGCGATGCATGGGAGTGAACTATGT
TGGCCTAGTTTACTCGTCGCCAGAGCTACCATTGCCGTGCACACCCACTGAAACCTCCAT
CAGTCCATTGTACATGGACAGGACAGCGACAGCAAAGTTCAGCTAAGCGTATATACAAGT
AATAAGCAGTGAGCAGCTCATTTGCCGTGTCAGTTGGTCGGCCTGAAAACGCATGTTAGT
AGTAGGCGCGTGCTGTGCTTGCTTCCAAATAAGAGCATCGAGCAAACAGAGTGAACCAAC
TCGTCATGATACTTCTAGCCATTTCAGAACATACCGTGGACTAATATAATACTTCAATTA
TGTCACGAAAAGCGTGCTACTTAGAGCATCTACAGCCCGACATCTTAAATGATCACGTCC
GCGGAAGCTCCTGGTTAGACAAAAGAGATAGAAAAATGTATCGTATTCGGGTTGTGTGTA
AACCCTCGTATATCCATCTCAAATATGGAGATAATACGAAGTCTTGCGGACGCGTCCGAA
CAATCCGCCACATACGATGTGATGGGCATATAAGAAAAAAATAATAAGAAATGTGGTTGT
GCGAACGGACAAATAAGGAGCACGTTCGGTCACTGACCGGACGAGTTTCCAGACATTTAT
GGGGTTATATTTGCAATGACCGGTTGTTGTTTTTTTTTTTAAACCGGGCAACCCCTTGAC
CGGTTGTAGATGCTCTTACAAATTACAATAGTTGTCGTTTGTTGTTGTGTGATAATTTTC
ATTCTTTAGGAGGTAGGTGCGGGTGGGCTCGTGGTCTCCGAGCGCACACATGGGAACAAA
ACTGAAATAACTGAAGAAAACGTCAGGTGCACACTGTGGGGAGAAAGCAGCGTTGGTGGT
CGACTGGATTTGGGCTCGTCATTTCGCCTGCCCCCATTCCCTATCCAGCTAGTTCTAACC
CCATGGCATGAGCTCCCCAAGACCAAGGGCAATGCCCGCGCTGCTAAACAATGCAAGAAC
AGTTGGCAAAGACCAGCTTTGTCAAACTACACCCTCACAGTCTCATCAAAGAAAACTAAT
CCCTCCGCAAACTAATATAAAGACGTTTCAGATCACTGAAAGAGGTACTCTAGGATTTCA
TAGAAGGAACACATCTGCAGTAATAAGACTTACGTCCGTGTGGGCAGTGTAATCGTACCA
ACCATCTGCATGCAACCAGAACAGTTCAGACGGTGTTACCCATACAGTAAAAGAGTCTGA
AACAGGAACAGAAGCAAAGAAAGAAACTGACCAGGAGGCACGGCGGCGACAAGCCCGCCG
CCGCAATGCACCATCCACCACGCGAGAAACACCGCGGCATGGCTCAGAGCAAAGCCACGG
CTCCTCATCTTGCACCGGCAAGCTAGCTAGCGCCGAGCTCTGCTCCCCAGCTTCGTGTGC
TCAAACACGACCTTCTTCCCAGCTTCGTCTTCCCCTCACAAGCTGGTGAGCGGATGCTGA
TGACGAATGGATGTATGTAGGTATGAATGTGTGTACCAGCTACTGGTATGATCAGGGCAA
GGAGTGCTACCCCATCCGGGGCTATATATAGGCTCCCAGGTAGAAGACGGCCGAGGCGGG
GCATTTCGGCGCACCGTCGCTTGTGCGCTTCCGGGTGGCCGCCCGCTCGCCCCGCACCTG
GCGGGCCGCCATTGGCCAGCACCGGGTCACGGGCCGGCGGCCGTGGGCGCCCACCACGCG
CCCTGGCCCGGAGGAAGCGGTGCGTGCGCGCCTTCCTTCCTTCCCTTCCCTTTCCCGGTT
TGGTGCGGTGGTGAGAGTGAGTGCCCTTGTGGTGCTCTCCAGCGCCGGGCCTAGCCAGCA
CGCCCTGTTCGCCCAGTGCCAGTGGGTAGGTTCACATGCGCGCGGTAAGATCGATCGTAT
CACATTCACATCACAGGTCCTGTGAGCGAGCGATCCCACCCCGCCTGGTTCCGCTGTCTC
GTACCGGTCCCGTGCTCGTCGCCACGGGAAGGGAACTGTGCCGCCGCGACAGTGCCGGCC
TGGAGCTTTCTCATGTCGTTTCGTTCTTCTGTTGCGTCGGGTTTCACGGCCCGTGCGCGG
GTTAAATTCTTGTGGTGGCGGTACGGTGAGTTCACGGTTGCGGATAGGCTGTCACGTATG
TCGCGCGTGGTGCCGTGTCCGGGAGTCTGTGGAGTTTAACAGCGCTAGGGTTGTTTGCAC
TGTAGTCGTCCAGAGCTCATCGTTCATGATAGGGGATCACGTTCCCTGCAGGGCACACCT
AGGGTCGACGTCGCATTAAGTAAGTAGCAAGCATGTGATGACATCGCCATGGAAAACAAG
CATGTCACACGGCCTTCTAAGGAAGGGAAGCTGATCATTCCAGTTGGTTGTAAACCGCCT
CGGCATAGGTGGCCCGGCCGGCAGGCCCGGCCCGAAGCCCGATATCCAAGCTGGGCTTGG
GCCTCACATTCCTGCGAGCAGCCCGGCCTGAACTTTGGGAAAAGCCCAATAAAACATGAT
TTTTATGCATTTTATATGAATATATATAGGCATGGTATTATAGTATTTTCTTTAAAAATA
GCTATATTTTTATCTTTAAATACAAAAAACATCCCTATTGTTGGGCTGCGGGCTGGGTCG
AGGCAGGCTTGGGATTTTGAGGTCAGACTTCATAAACCCGGCCCAGCCCAAAAATGCCCA
CGTCTAGTTGGTTGTTAGAGCATCTAGTCTCAAACTCCCCTCAAACATCCAGCTGGAGTC
CTCGGTCACAAACAGTTAAAAAAGGACTCAGAGGGACATCTCAAAAGTGGCTCAAACGTT
TGGGCTAACCGGCACTGTCGTGGGTATAAGCCTGACNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAGTTCGGGCCCCTCTGCGGTGGACG
TAATAGCCCTACGTCTCAGGGCTC