Map Locations of contig_91932 (8985 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_91932

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80652 2 1731 bp AK362431 Available Available None
MLOC_80651 2 1461 bp AK253105.1 Available Available None





CDS Structure of MLOC_80652






CDS Structure of MLOC_80651






Contig Sequence (8985 bp)

>contig_91932 8985 assembly3_WGSMorex_rbca.fasta
CAAGCGCGTTTCTTAACGCTTCCTGATGTGCGATCTACAACGGTACGTAGATCCAAATCT
CCNNNNNNNNNNNNNCATCACCATGGTAGGTCTTCGTGTGTGTAGGAATTTTNNNNNNNN
CCATGCAACGTTCCCCAACACCTTCACCTTCCCATGGAACGCTATCGGCAAATCAATTAT
TCTAGCCCAGATCTCGAACTTGAACAACTCAATGGATGAATATTTCGTGTAGCCATCGTA
TGGAGCGATGATCACTAGATGGCCCCTGAAGTGCCATGGGTCGCCTTGGGTAACACGCTC
CCAATCTCCCAAGCAGTTAAACTCCATCTGAAACAGGTTCTCCTCCAAGGTTTTGATCTT
GACTGGCCTCGCTAGGTCCCAAGTTGATTTAATGTTACGGAAAAACCAGTAGGAGCTAAA
CCCCTTGTCCAAATGAACGCGCACTAAGATCATCTATCAGAGGTCCTCCTGTCCAGGCGC
GTCATCGTCCTCGAACACGACATCATCGAGGTCCTCCTCCTTCTAAGCCAACTCCTCCAA
AAGATTAGCTAGGCATTCTTTTCCTTTGCCCCTTGAAGCCGAAGAACTTCCTTGGCTAGC
CATGAAAACGATCTTGAGTAACCCATCACCTGGTTCACAACGATCTCGAAACACTACCAA
GGGCCTTTTGTAGGGGTCTCCCACGCCGCAGCGGACCCAGCCCCTCGCGAGGGGTAGTAC
CGGCTGGAGTCAGAGAGGGAAGGACAGGCTCAACGATGCCGACGGCGCCGAGAGAATAGC
TAAACCCTAACGATAGGAAAGGTCACCGTCTCTACTTAGCCGGGCAAACCTCGCAACAAA
GGTTTTTTTTAGACAATCTTGCAAAGCTTTTATTCAACCGTCACAAGGTTTACAAGGACG
AAAGAAAGATTTCCGGGGTGACCTAATCAAACATGGCGACCAACCCCCAACTTTAAAGCA
TGCTTCGCTAGATTGTGAACCTTGATATTCGAACCTCGCAACAAAGGTGTACACCTTAAT
TTCGGTTGCGAGGAGCGCAACAGATGGGAGCTCTTAATCGGCGCTTTAAGCGCCGGTTCG
GGCAACTGGCGCCTACAGCGCCCAGCAACGGCCCGTGGCCCACTAAGTAAATCCACTACC
GTTCATTTTTGCTAGGCTTGTTTTTTACGGATGTGATGTGTTATTGGTTCAGGAAAAAGA
CCGGTTCTGGTTTTTTACAATTTTGAATATGTTGTGTAAATTAAAAAGTTCATAAATTTA
TTGAAAAAGGCTTCATTGATTTGGAAAAATATTTGTTCGTTTGAAAAAAGTTAAACAAAA
AGTGGGTGCATTTTTTTTTTAAAAAGAAAAATTATATAAAAATTAGTATGAAAATAAAAA
ATGAAAAAAATAGTAAATAAAATAAAAAAGAAAAAAAACCCGAAGAAAAACCAGTCCTGA
AAAAATCTAAATGAAAAACCCAATCTAAAAAGCTTCTGGAATCTTCACAAAACCAGAACC
CTCCTCCCCCTCCTGATGGGTCCATGACTGAACGCTGCAGGCGCCGGTTAAGAAAAATGC
ACTTTAATCGAAGCCTGCAGCGTCAAATAGGATTTGCCGCAGTAGATTGGGTCCGTTTAA
TTGTCTGGCCCGATTTACTTAACCACACCTTTCTTCCGGCCCAGCGAGCCTAGGTTATCC
ATCGGGGTCCAACAGGTGACCACTGTATACAAGCCCGAAACCTAAGCAGGCACGCCAAAG
GACAACAGCGCAAAACCCCACCACGGACCCTCGCCGTCGCTGTCTCCCATCTGGCCGGCG
CTAGCTAGGGCACCTCCCCCTCCCCCTCCCCCTCCGACGATGTCGACGCCCTCTGATCCA
GCGGCGTCCGCCCAGCCCCCCTCCACCGCGGCCACCTCCAGCAGCGGCCTCACCTTCAAG
CTCCACCCCCTCGTCATCGTGAACGTCTCCGACCACTACACCCGCGTCAAGGCCCAGGCC
TCCTTCCCCGCCGAGACCCCGTCGCCGGGAAAGGCCCAGGCCTCCTGCTCCGCCGAAGGC
TCCTCGGCGCCCGCGGAGCCGCCGAGGGTCTTCGGGTGCGTGATCGGGGTGCAGCGCGGG
CGGACGGTCGAGATCTTCAACAGCTTCGAGCTCGTCCTCGACCCCGTCACCGGCACGCTC
GAGCGCGCCTTCCTGGAGAAGAAGCTTGAGCTCTGTAAGCCGACCGCGAATCTCGTGTGT
TTCTAGGGTTTGGTGACGCCAGTATACAGGAATATAATTTGGGGTTTGTGCGTGGTCTGA
TTGGTTCTTGCTGCAATTGTGGCTTTTGCAGATAAGAAGGTGTTCCCTGAATTCTATGTG
CTGGGCTGGTACTCAACTGGAAGCGATGTGCAGGATACTGACATCCTAATGCACAAGGCT
GTGAGTACTTACAATCCCGTTTTCAAGTTCCTAATCCTCGAGACTGACAATGTGTTTGGT
TCTTGCTCTTGTTACCAAAAAATGTGCAATTGTGATTTGGTGTGATGTACTACTCTTGAA
CGTGGTTGGTTTTTTTATCGCCGTGTGGAAAGAGGAGTAGAGAACATTGCGGGGTAGAGG
ACATGATTTCTTGTATTGCTGTGCATAGTGTGATTTTGTTTTTTATTTGTTTGTCAGTGT
TTTACTGTGCGTCATTGCATTCCATCCATGTACCTGCAAAATTGAGGAAATGAGTTGCGT
AGTGCCTATGGAAGTATGGGAGTTCTCTTGTTGTAGTGTTATAATGGGTGGTAGAAAGGA
TGATAGGTAACCATCCATAAACCAAGACCCCCATATGCTTTTGATGAGGTTCAGTTTGGC
TGTAGGATAAACATAGATAATTTTGTTTCAGTCTTTTGTGCAGATTGCATATTACATCTG
TCCTCAATCGAACCTATACAACTGTTGCAAACTCTTAAGTCCACATGTATGGACCAGCAT
TACCTTTGAAACCGAATCAAGTTAACACCAGATGTAAAGTATTTTTTTCTACATGTTTTT
TTTATGTCAAAATGGTGCACGGCCTGTGTCATGGCCCGCAGCAACATGCATTACTTATAT
TGACATGATGCAGAGCTAGTCTCAAGCTCTGGTACATTGGTCTTTTTTGTTCAAGTGCAT
CACCAAATAAATAGAGACCATACTGGGAACTCGCTTTTGAGAGGAATATTGCTTTTCAAC
ATGGATACTATCTGCTGTATGTAATATTCATTTGCCTCCATGTAACTTTGTTTTTCTATG
ATCTAGCTGATGGACATTAATGAAAGCCCTGTCTATCTTCTCTTGAATCCTGCAATCAAC
CACTCCCAGAAGGATCTCCCTGTAACAATTTATGAGAGTGGTAGGTAAATCTGATCTTAA
ATTTCTATTATGATTCAGTGGTGATATTGGCATGTCTTCTCTTTTGGTTCTGCATAATTG
GTCTTATGTATGATGTGAGCCAACCTTGGTTCATGTTGAAACCACTTAGGGCGGCAGATG
GAATGGCTTCCAGGGGATTAGGGTTTTGAAAGCGGGAGATAGGAACATGTTGAAATGAGA
CTAATGAGAGCACAGTTGAATTTACAGCCCTCTTGCTAACATAAAAAATAAAAATATGAG
AGGACTAAGAGAGGTTTGGGAGCTACCAAATAGACGAACCTAACCTCCAAAGACTTCAAA
ACTTGGAAGCAAACTGAACTCATCCTCTATCTCTTTGCTCATTCTCTGGAGGTACAGATG
CCTACATCGGAGAGACTCAACTAAATTACATATGATACAACTCTTATTTCTTTGTTGACT
ACACCCCTATCGATCGATCCAATGTCTAACATACTATTATTATTAACAGCATGCTTTACT
TCCTAATAATTGTCCTGGATAACGAGTTCTGGTAGGTGTTGCTGCTGTTGGTTTCCTTGA
GCCATACACCTGCCAAGCCATGAGCTATAGTGCCATTTGCTGCTCTTATGTGCACTCACC
TGACTTACCCATGTTCACAATAGTATAACTTCATGGTTTTTGTGTATGTTAGGAAGCAGG
GCCATTGCCTTGTTCAATTGATCATGAATCATTTTTTAATGTTCGTTGTATTGACCTTTG
CTTTAGGGTGCACATCAACTATGCATGCTGTTATATAGTTTTCTTAATATAAATAACAGT
TTGTAGCCATCACTATTATTAGTATGGTTAGCCCTTAATTTTCTCGCTTCTGATGTTTCT
GTAACTAGTTTGGAGTTTTTCGTTGCGTTAATGCTCTTTTCCTGTTCACTTTCCCATCTG
TGCTGCTAATTCTTTCTTTATCACCTTTGTAAAATTCAAGAGTTGCATGTTATCGATGGG
GGTCCACAGCTCATCTTTGTCAAATCAAATTACACAATTGAGGTTAGTTTTTCCTTCTCT
AATCCCTTAGGGTTGATCTAGCTATGAATTTGTTTTTCTAGTTCTGATTTATTGGTAGGA
ACGCTTATCACATGTACATTTGATTTAAGACTGTAGAAGCAGAGAGGATATCTGTAGATC
ATGTTGCCCATCTAAAACCATCTGACGGTGGCTCTGCAGCAACTCAATGTAAGAATCCTT
TGGTGAACATCATTTTAGGATCTTGGATAAGGTCATAGAGTTATACAGTACTTGTACTAC
TGAAGGCACCATTTTCAAACAAAATACTAACCGACATGTTTGAGCAGTGGCTGCTCATCT
TACAGGAATACACAGTGCCATCAAGATGCTCAATAGCAGGGTTCGTGTTATCCAGCAATA
CCTTGGTGCCATGCAAAAGGGTTTGTCTTTTGCCACTGATTTTATGTTCTAAATCTTTCT
CCAAAATGTGGCTGCTGTTTATCCACGTGCTTTAAACATAGTCCCTCGGTATATATTTGC
CAGTTGCAGTGTCTTTGAACTAATTGTGTAAGCGCTTGTCAATCACTAAATCTCTTCCAT
GACTGCAGGTGATATTCCACTGGATAATTCACTTCTTAGGCAAGTCTCAAGCCTCGTAAG
AAGACTGCCAGCTATGGAATCGGAGAAATTCCAAGATGATTTCTTAACGGTAGGTTAACT
CACCATTTTGTTGTGTATTTAACTGCTTAACTAAAGCTTGCATCTTATGATACCGTGATA
TTCCCTTTGTTTCCAGGAATACAACGACACCCTCCTCATGACTTACCTTGCAATGTTCAC
GAACTGTTCAAGGTATGCCTCAGTTTCTATCATGAAACCTGCTGATAAGAAAGAATGTTG
CATATAAACAACAGAGTAGAATAAATGAATTTACATACATCCACATTGAAGTTATGTGTC
AGATGCTCCTTTTGTGGATATCGTATTCCTCTGTATCCTCAAATCATAATTTGTTGATGT
TGGTATTGATGGTACTCTTTGGTGACTTGCAGCACAATGAACGAGTTGGTCGAGAAGTTT
AACACCACGTATGAGAGATCCCCTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGATC
GGTTCCAACCGTCCTGCTGCAGCTGAGGTTTTGGTGCTGGTTATCCGTGCTGAGATTTTG
AAAATAGTTCCCATATCTAGACGCAATTTTTTGCGTGCAATCAGTTAGGTCCGGCAGTAT
CTGAGACTTTTCAATCTTCTTATCCTCTCTGGGTTGGATTAATGACTCGACGTGCCTGGG
TTGATTGATTATCCCTCTTGTCCCGAAGTTGACATGTAAAGTTCGACTTAATAGATGTTG
CTCAAGTTAACTCGTATCTGGGTCTTATCCTGGCTTCTTCAAATTGGTTATGCTCAGCAA
AATCTTGAAATCCTCAAGCTGTGTCATTATTATTTTGTCTATTGTGAAAAGTACTTGGTG
CAGCATGCCGATGTATACACAGCGCACACAACTGCTTGAAACAAGCATTTAATTCCAATG
CATCTTGGTGGGAGACACAAGGGATTCGTGTCAAAAAATCCTTCATAAGCGCAGGAAAAG
TAATTTGCACAGTTAGATGTATAATCTCAAATCATATCATATCTTTTCGTACCTTTATAA
TCCCACATATCTCAACCTAAATCCAATTAAGATAGATGGCTGTTATGCGTCCATCGGCTG
ATCTAAAAAAGATCAGCCGGGCCGCGAGCCATCACATCCTGTGTCATTGAGGGGCTGAGC
CATGTTCTTCATTTTTGTGAAAGAGGTAATGTTGCAGAAACATTTGTATTATAGATCATC
TCGTAAAAATCTTTGCAATAAAGGTCATGTTGCAGAGAATTTTTACAACATAGGTCAGGT
TATAAAAAAAATCTGTCTTTTTACAACATAGGTACTGTTACGAAAGAAACTTTTGCAACA
AAGTCATGTTATAAAAAACTTTTGCAACATAGATTAGGTTGCAGAAAAAATTATTTGTCT
TCTGACAACATAGGTACTATTGCGGAAGAAATTCTTGCAACATAAGTGATGTTGTGAATT
TCTTTACAATGAAGATGATGCTCCAAAAACATGTCCGCCATTGCCAATGCATGTCATAGC
AGGACCGCCATCGTTCGCTATTGCAAACGAATGTTATGTTTCTGAAACAAATGCATGAGC
CTGGAAAAGAAGAAAACGTGTGGCTCATATGCTTCGTTGGAGAGATAAGGAAGGGATATA
AACTGTTTAGTCCCTGATCACGTGTCAATCAAAAGTGGGAAAAATCTGTCTTTTTACAAC
ATAGGTACTGTTACGAAAGAAACTTTTGCAACAAAGTCAAGTTACAGAAAACTTTTGCAA
CATAGATCATGTTGTGTATTTTTTTACAATGGAGATGATGCTCCAAAAACATCGTCCGCC
ATTGCCAATGCATGTCATAGCAGTACCGCCATCGTTCGCTATTGCAAACAAATGTTATGT
TTCTGAAACAAATGCATGAGCCTGGAAAAGAAGAAAACGTGTGGATCATATGCTTCGCTG
GAGAGATAAGGAAGGGATATAAACTGTTTAATCCCTGACCACGTGTTAAGCAAATGTGAA
GCAAAAGTGGCGAGTTTAGTCCCTGATCACGTGTCAAGCAAATGTCGAGCAGAAGTGACA
ACGGATGCTCGCATGATAATGTTGACCCAAATCGATTCCCATCAAAATTTCCCTTCACAC
ATCATATTTCAATCTCAATCCAATCAAAATTTTCCAACACAACTTGCTAGAATAAAGTTA
TCCTCGTTGCAACGCATGGGTATTTAGCTAATACTCCCTCCGTCTGAAATTATTTGTCAC
AGAAATAAATGATGTATTTTAGTTACGCGTACATCCATTTCTACCCATTTATGCCACAAT
AGATTTGGGGCAAAGGAAGTATAAAATAGAATTTGAAAGCTGCATATCTAAACTCCTAGT
ACAAATCCACCCGTTCATTACAATACAACATGAGAAAACCAAAGTCAAGAATTACAACAT
GAGGAAAACAAACGGTCCAAAGAATTGTGTTGTTACATAATGGAACAGAGCATTACAACA
CCAACCAAAGAATTGTGTTGTTACATAATGGAACAGAGCATTACAACACCAACCGCAATG
TCACGAAGAATGCATATTACAGGGTGCGAACGTCAGGATGGCACTGGTTCCTGCAACCCA
TCTCACAGTTACTGCCACATATCGTCAGCCCTGGCTTCCGCTCCAGGATCTCCGCTACAG
TCGGACTGCCCCCACGACGTTCCAGCACGTTCTTCCCGACGCCGAGCCACCGCAGGCCTC
GGAACAGCGGCAGGTCGACCAGGGGATCAAACAGCCTCAGGAAGTTGCGTGACAGCCTGG
TGCAGTAGGAGAGATCCAGCATTCTAAGGGTGCTTTTGCCAGAGCCATGCCGGTCCAAAC
CTAGAGTCTCGAGGCATGGATCGGTGATGAGCACGCAGTTTCGGAGACACAGGCTGCTTA
TCCGCTCGCAGTTCTTGGCAATCAACGTGACAGCTCTGCCCGATATCCTTGGCACGTTCC
CAACATCAAACGCGGCCAGAGTTTTGTTGATGGTGCCACTCCCCAACAGCAATGAGGCTA
TGCCGTTGTTGGTGATCCTTCTGCAACTCCTCAAGCATAAGGAAGATATTGGGCAGCTCC
CGTTACCGAGTGCTGACAGACCTGCATCGGTAATATCAGCTCCCGCAAGGTCCAGTAGAG
TTAGCTTGGAAAGCTGCGAGATGGAGGACAGGCCAGAGTCTGCAATGCTCCTGCAACCTG
ACAGATCAAGAACCTCCAAGTTGGTGCAGGATGACAGAGATATTGCTGTTTCGCTGGTCA
AGAGACCGCAAGATAGCAACCTCACTTCTGTGATCTTTGTTGCTGCCTCATCAAGATCAA
GGCACGTCAAATCTGACAAACATGAGGCGGTACTGACCTCAAATTTCCTCAGGTCCTTGC
AAGAGTGGAGAAGGGCTGCATATCCAGCATCTCTCACTTTAGAGAACCCACCAAGCCTAA
TGGTTTGGAGTTGCTTGCATCCTTCCGCAAGCATCAGCAGCCCAAAGTCGTTTACCCTTC
TGAAGGTGGAGGAGCAACCCTGCTTACCGCGTGTAAGAGATAAATGTGTCAAGTTCTGGC
ATAAACCAAGTGCTTGCAGCCCAATATTGGTCAGATCATTGTCCAGATCTGCTTCACTTC
CAGGGTTGTCTTCTAGGCAGAGCTCAAGTAAGTTTGAGAGACTTCCAGTGATGAAGGTAA
CAAGTTCATCCGTTATTATGTCCAGAACTAAAGACAGTGATTCTAGACTGTCACTGAAGG
GTGTCTTCAGAGATGAGCTTATAGGAAAGAGTTTCTTTGCCTGCCAATTGGCTATAGGCA
TTAGCAATAGTACCTTGATGGTACTAGGCATAACAGGCACCAAAGAATCGAAATCAACAG
AGCCTGGAGCTAGCAGAGGGAATTTCAGGGAAAGATTCTGCATGCATAAATTTGGAAAGA
CAGATTAGGTATATACACACAGCAACCAAATTAACTTATTCCAACAGTAATTACTCAAAA
TTCACGGCTAATATTACTTAACCTTATATATATATATATATATAT