Contig Data
morexGenes
Links



Map Locations of contig_9121 (4660 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_9121

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80542 1 671 bp MLOC_80542.1 Available Available LOC_Os01g46600.1, FRAME:-1, EVALUE:6e-30, 13101.m04791 protein seed maturation protein PM41, putative, expressed





CDS Structure of MLOC_80542






Contig Sequence (4660 bp)

>contig_9121 4660 assembly3_WGSMorex_rbca.fasta
CCCCACCCCCGTGTCCGCCTCCAGAAGCACGCGGCGCCCGCCGTGCGCAGACGCGCCTCC
CTGATGGTCGGGCGCCGCGGGCGCGGGGGGGGGCACTACAGACCCCGGATCCCGCGCCGG
TGCCGGTGGCCCCGGCGTCGCCGGCCTGGCCCGGCTCCTTCCTGGCAGCGAAGGCGCTGT
CGTCAACCTTGCGCGACGCGGCGTCCTCCACCTTGTCTTGCACCTTCTCGATCTGGATGT
TGCCCTGGTCCTCCCGCGACCGCAGGTCCGTGCGCGTGCGGTTCTCCCCGCCGCCCACCG
ACTCGTACGTCGTCGCCGTCGTCTGCCCGACCGGGTGCGCCCCCTGTGCCCCCGACATCC
TTCCTACCTGCTTGCACTTCACACGCTCGTTCCTGGCTAATTCGACGTGGTCTTCCTGCT
CGGTTCCGGTGTGTTTCGGAGGCGGCGGGACGGCGTATAAATCGTTGAGCTGCAGCGAGC
GCGAGCGGCGCGGTATGGGCGCGTGGCATGGAGACGTGGTGTGACGTGGGTAGTGTGGGC
GTGACACATGGCTTGGATATCTCTGCCCGGGGCGTCTAGATTGGACTCGTGTCCGCTGCC
GCGCGCAGCTCAACGCTGGAGGCTTCGTGCTGTACTCTGTGTGTGCGCACTGAGCAATGA
TGGACCTCGTTGGGGATAAACATCAAAAAGGATGAGCTGGCGTCTAGGATGATAATGGTC
GGCGTGCCAGTCAAAACCATTTTTTTTAAAACATAATACAGACGCGAGCATGTCAATCAA
AACCAATTTGTATTTCTATGTTTTTTGAGTGCAGTGGTATCCGCACACATTTAATATTGA
TGCCTGTATTTTAAATTTATCGTACATCTAGCTTGTATTTTTTGATTTTTTTCTACATCT
AACGGTCATGTGCATTTTTGTGAAGAGATGTTTTCATTTATTATAATAACATTTGTGTCG
ATTTTATCAATCTCAAAACGTCAATTCACCTTTTTAAAGATGTTATAGGATATGCGTATG
TGTGTTAATAAAAATGAATGTATATTTTAACTGTATCGTGTTAAAGAAAGAAAAAAATCA
CGTTGGCCTGGTCGACTTTGCAAAATTGAACCCATCAGCAGAAATGTGTTTGTGATTATC
CTTTCGTGTCCACACTCTGTTAGGAAAAAATCAACACCGTCTTTTTTCACATTAAAGATT
ATTGCGGGGGTGAAACACTTGAGCAAGATCTGGGAGAATAATTTCGTATGTATTTTTTTA
CGAAGTTAGGTTAAGAAGACGGTTTCACGTACTTTAAACTCTTTTTGTTAATTAATGAGG
CAAGTGTTTAGTCTTGGTTCCAAAACAAAACTGTGAAATGACCATCGTTTTGCTGGAACT
GAGTTCAATATATATACGATCTCTACTCGATTATATTTCAGTGGTGTACTCAAGATTTCG
GCCGATATTATCCATGTGTAGAGAGCTATTTTTAATCATCGTAGAAACAAACCATACAAA
TATGTCATGTGATGGCTTTTTAAAAGCTTGATTTTTTTTAAACTCAACCTTGCCTTCATA
CTATAGAATAGAATTTTCACAAAATGATTTTATTTTTGGTTTGCATTAACCATGTATCGA
GGAACATCTTTCAGCTATTTTGCAGATAAAGTCATACTCGTGGGCAGGGCACGAGATGAA
CCTAGAGGAGTGAGTAGGATAATATAAAAGGTATACTTTGATTATTAGCAATTTAGGTTA
TGTGGAATATGAATGTGAGCCTAACGATACTATGGTGAGATAACAACCTATATGATGTTT
GCAAATGGTTTACATTATATTTGTTTCTGCTCATACTCAAATACACAATGTCTAATAGTA
TCATCTATTCTTGTTTATATAGATGTGGATCATCCCTAAAGTAATGTCTTAAATGAAATA
AAATCTTTTTTGTTGATATACGCAAAACTTAGTGAAATATATTTAGCAATAATATAACTA
GTATAAACAACATATCAAGGATTATCGCGGGAGGAATAAGTATTCACAACAACTAATTGC
TCATGAGGAAAACTATCATTAACATGTATTGGGTTCCATCCTAGACAAATTATCTCATAC
TGAATTATCAGCCCCCTTTCTATCAACAATATGCAAAAAAACTCTTGTAATAATAACACC
CACCTAAACCACCTAGGCTTAGTATTTTTCTAATCCATAAGGTACTTGATGCCAACATGA
GACTTTAGAATTGGCAATATAAGGTCTAAATTTATCACACACAAACACAACTGTAAAAAT
CATTTTCAGTAGTAGCATAAATTTTTTAAACACTGTCCAAGGTCTTACTAGCATAATGAA
TAATATTTAACTTCTTATCAACTCATTGACGAGAACATCACCTACAACATAATCACTAGC
ATTACAGATATTTCTTAAAAATAAATTCCAATCAAGTGGTAGGACAATAGGAGCAGTGAT
GAATGCTTTCCTAAGTATCTCAAAGGCTTCTGCACAATCATCATAAAAAACAAATGGAAC
ATCCTTTGTAATAAATTGGTAAGAGGCCTAATTTTTTTTAAAGTCCTTAATGAACTCCCT
ATAAAAATCGTCATGAGCTAGAAAACTTCTTATACCTTTAATATCTTCAAGGCATGGTAT
TTTCTCAATAGAATCAACTTTAGCTTTGTCTAACTCTATTCCTCTTTTAGAAATCTCAGG
GCCAAGGACTATAGCTTCGTTTACCATGAAGTGGCATTTCTCCCAGTTTAGGACGAGGTT
GATCAAGACTAAGTCAAAGAGTGGTTCAAGTTGATCAACACACAACAGGTAGAAGATGTA
TCGAATGGGGTCAAGTGATCCCATGGTATGGTAAGAATTTTCCATTGTGCTACGTCTACT
AACCCAAGATCTATGTGAGGTTTCTATGTGGGGTTAGGTATCTTTCCATTGGTTTGTATG
AAAAGTAAAATCTCATATAACCCATGGAGGATGACATCAAGTGGTGATCGTCATCAAAGT
TATGGTGTGCAAGTTCAAGTGAAGCATCATGAAGAGACCATTCTTGAAGCTTGCCGTCCA
TTCTCGTGATAATAGACATGCGAAGATGTGCCTAAGAGAGTCTCACCTACAGTGGAGTAT
GTGGGAGCAATTTACTAGTCCACATCGTGCGTGCGCAATCAAGAAAGGTGGTCCAACTTT
AGGAGGTCAAGACTGTCATCATCTAGCTCAAGTGGACTATGTGCAAGGCTAATGTTCAAC
CTTGATAGACTTTCTATTTTATCGGTATCATAGTGTTAGTTGGGAGACCGGGTTATAGGT
TTGATTGCCATACCATCAAGGGGGGCTCTCGAGTGAGTAGNNNNNNNNNNNNNNNNNNNG
AGAGCTCAAACCACTGCATCCTTGGCATCATATTTATTGATTCTTATTTTTCTTTTCTCT
ATGAGAGGTTTTAGAGTTTGTGTGCATCATCTTTGCATTTTGGGTGTTGGAGATTTTGCC
GGCTCATATTTTGGGAAGTAAATCTTCCTTATCCTATTGGCATTTCTTCTCCATTGGTAG
TTCTTAATATATCCAATAAGCTTGAGCTTGTTATTGGGTAGTTCTTGTCGCCAACTATCC
AACAAGCTTGAGTTTGCTGATTTGAGAGTTCATTTGCAAAATTTATGGCAGTTTTAGTCT
TACTTGATTTATCTGTTCTGCTCTGGCTTTCTGGCATAGGCCAAGCGGTAGTACCACTGG
TGCCCATGACAGTACATATTAGACAACACTTCCACTGGTGCCCACGATAGTCCCACTTAG
GTGGTTCTTCCGCTGGTTGGTACTGTGGCTAGTTCCACTTGTATTTAGCCTTGTGTTGCC
TCCTCAACATTTCGCGGTAGTACCGCTTTGGCAGTACTTCCGCTGGTTAGTACCGCGACT
ACTTTTGCTTGTGGTGAGTTTTATGCTGCTTTCAAAAAATTCGTGGTAGTATCGATCCGA
CGGAACTACCATTCTAATACTTCAATACCCATTGGGTTGCGTTGACACAGCTAGACGGTA
GTACCGCTCCCCGGAGCGGTAGTATCTCTTAAGGCATATTAGTGCATCACAGTTGGATTT
GAGCCCTAATACTTCTCCATCGTACCTATATCTATATTTTTTGATTGTTTGATGCTATTA
TACAATCAATCTTGTTTTTTCTATATGACATTTTATGCCATTTTTGGTACTAACTTATTA
ATTTAGTTCCCAATGTTAGTTTCTACTTTTTGCCTATTTTTTGTTTCGCATAAAAACTAT
AGCAAACAAAGTTAAAACACGACAAAACTACAGGTGTTTTTTCTGGACTACGAGAGACCC
TAGAAGCTTAGGGGGGGCACGAGACGATGCCCGAGGGGCTCACAAGCTCAGGTGGCGTGC
CCCAGGGCCCAGGGGTAGGATGCATCATGTGATCTTGCGGGGCCCCTTAGGCTCTCGCTC
ACCTAATTCCAACTCTAGGGAGAGTCAGACCATTTTTATCGCCGCTGCAAGCCTCTATTC
TTACGCAATACAATCTGGAGGCCTTTTTTGGTGCCGTGCCGGAGGGGGAATCCATCACGG
AGGCCATCTTCATCAACCATGATGCCTCCATGATGATGTGTGAGTAGTTCCTTGAGGACC
TACGGGCCCTATCAATAGCGCTCTCTCTCTCTCTCTCTCT