| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_90688
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_80471 |
1 |
416 bp |
MLOC_80471.1 |
Available |
Available |
LOC_Os08g02230.1, FRAME:+2, EVALUE:4e-38, 13108.m00160 protein FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed |
| MLOC_80472 |
1 |
1057 bp |
MLOC_80472.1 |
Available |
Available |
LOC_Os08g02230.1, FRAME:+3, EVALUE:1e-118, 13108.m00160 protein FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed |
CDS Structure of MLOC_80471
CDS Structure of MLOC_80472
Contig Sequence (4432 bp)
>contig_90688 4432 assembly3_WGSMorex_rbca.fasta
CGCATTTGCGTGTATGATTAACGTATAATTAAATCGAGGGCGTCACAGTGGGGGTCGGTC
CCAACAGGTGGTGCCGCGGTGGCGGATGCCCTTTCGCCGGGGCGGCCTCGATCTTGGGCG
GCGGAGACAAAGACCCGACGCCGCCGTTAGAACCCGGACGCGCGGGTCCTGGTGTGACGT
GCGGCGGCGGCGAGGGCAGGGAGAAGGTGTTCGGTGGCCGGAATCTATGGGGGCGACGTC
GAGGGCGGTTGGAAGGGGAAAGGGGAGGGAAGCAACCCGCGCGTTCAAATGTCCCTCAAA
TTTTTTTACAGGCCGGTCACTTTTGCGGGATCTGCTTGCGAGCTTTTTCGGACCGAAACA
GTAAAACGACGGTTATTATTCAGTTTTCACGGAAATGCGGGATCTGCTAGATATGCTGTT
AAGGCCTAGCTTCGGTGTTTGTTTGAGAGTACTGCAATGCAAGCATAAGTACATAGGTGT
CTGGCCCGTTCACCATTCGTACCACAGATCACAAGACCAAGAGATAGCAATGAAAGGTGG
CACTAGCTTGCTGGCGGTTCTCCTCCTGGCAGCAGGATACCTGCTCCACGGCGGAAGCTC
CAGCCCACCACCGGAGCCAGTCATCTGCACACGCGGCGGCGGCACGTCCAACTGCACCGT
CACCAACACGTACGGATCCTTTCCGGACCGGACCATCTGCCGCGCGGCCAGCGTCGCCTA
CCCGCGCACCGAGCAGGAGCTCCTCGCCGCCGTGGCGTCCGCCGCGTCCGCCAAACGCAA
GCTCAAGGCGGCCACCAGGCACTCGCACAGCCTCCCCAAGCTGGCGTGCCCGGGCGGCCG
CGACGGCACCATCATCAGCACGGAGTGGCTGAACCGGACGATGCGCGTCGACGCCGCGGC
GCGGCTCGTGACAGTGGAGAGCGGCATGGTCCTCCGGGACCTCATCGAGGCCGCCTGCGC
GGCGGGGCTGTCGCTGCCGCACTCGCCCTACTGGCGGGGCCTCACCATCGGGGGCCTCCT
GGCGACGGGCGCGCACGGCAGCTCGCTGTGGGGCAAGGGGAGCGCGGTGCACGAATACGT
GGTCGCGATGAGGATCGTGACGCCGGCGCCGGCGAGCCAGGGGTTCGCCGTCGTGAGGGA
GCTCGGCGCCGATCACCCGGACCTGGACGCGGCCAAGGTCTCCCTCGGGGTCCTCGGCGT
CGTGTCCCAGGTCACCCTGGCAATGCAGCCGCTGTTCAAGCGTTCGGTGACGCTCGTGAA
GCGCGGGGACGGCGACTTGCCGGCGCAGGTGACCGCGTGGGGCCGCCTCCACGAGTTCGG
CGACATGACGTGGCTTCCGCAGGAGGGGCAGGTCCTGTACCGGCAGGACGATCGCGTCGA
CGTCTCGTCGCCGGGAGACGGGCTCAACGATCTGCTCTTCTTCCGGTCCACTCCCACGCG
CGGGCTCGTCGCCGCCAGAGCCGCCGAGGAGCGGCTGCAGGAGAACGGCACCGACGCCGC
CCGGTGCGCGGCGGTGCGTGCCGGCGTGGCGGCCGCCGAGCAGAAGGCATACGGGTTCAC
CAACGACGGCGCTTCCTTCACGGGGTACCCGGTGGTGGGGTACCAGCACCGCATGCAGAC
GTTCGGGTCGTGCATCGACAGCCCGGAGGACGGCCTACGCACCGCCTGCGCGTGGGACCC
GCGCGTCCCAGGCCCCTTCTACTACAACTCGGGCTTCAGCGTCGCGCTCTCGAGGGCGCC
GGCGTTCGCCGCCGACATGCAGCGGCTCCGGGACCTCGACCCGGCCGCGTTCTGCGCCGG
CATGGATGGCAGGGTGGGCGTGCTCATCCGCTACGTCAGAGCGTCCTCGGCCTGCCTCGG
CAAGGCGGAGGACTCGGTCGACTTCGACCTGGTGTACTACCGGAGCCGCGCCGCCGGCGA
CAAGCCGCGCGCGCACGCCGACGTGGTGGACGAGATAGAGCAGATGGCGCTGCGCAAGTA
CGGCGGCCTCCCGCACTGGGGCAAGAACCGCAACTCCGCCTTCGAGGGCGCCATCGCCAA
GTACCCGAAGGCCGGCGAGTTCCTCGCTGTGAAGGAGAAGTACGACCCCGACGGGCTCTT
CTCCAGCGAGTGGAGCGACCAGGTGCTCGGCATCAATGGCGGGAGCCCCAGCATCGTCGG
GAAGCGCTGCGCCATCGAAGGGCTCTGCGTCTGCTCCGACGACTCGCACTGCGCGCCGGA
GCAGGGGTACTTCTGCCGGCCAGGGAAGGTGTACACGGAGGCCAGAGTTTGCTCCTTTTT
ACGTGCACAGTGACCCCGTGATCAATTAGGGATGGTACGCCATGCAATAATCTACGGTTG
GTATTGTCGAAAAAAATAATACGGATGAAACTCTTTGTTGGAATGGTACCTATCACACAT
GGTTGCAATAGCTTTTGGGGGATTATCTTCTTTGAAATGTTATATCTATTTTCTTTTGCA
AAAATTGAAATGTTATATCTTGACAATTGTTTCCTCAGAACTCAGATCATTCTCCATCTG
ATTATTTGTACCAGCAACAAAGTTGTTTAAAGTGGTCTCCTACAAAAGGGGATGATCGAG
GATTTCAGAGGCAATTATGCACATCGTAGAGCTCCATACAAGAGTTAATTGCACGATCAC
TGTTAAGACAGTACATGTAGTTTGATATCACTTTTCGTATTTTTTATATGTCAATATCAT
GATTGAGGCAGTCTGTTAAAATATAGTCTAAAATTTGTATAACAGTGTATCTAACTGTTG
AAGCTGTGATAGGTTCTTCTAAAAAAACACCGTTATTTTTTATTTAATCATGCAAACATT
CCTTTAGAAAAGGACCCCGTCGGAAAAAATTCAAAAACTAAACGCACGCGCGCCGGCTGG
GATCCGAAACCGTGCCATGCAGCTCGCAGGGCGACGTTTCTGTCACTGCGCACATTTTAC
TTTGATGTGAAAATGCACGTATATGCCTTTTTTTTACTTTGGGCCACTTCATTTTTTAAT
AATATGAACTTTTTCATATTTTTTTATTTTCTTTCGATTGTGTGTATATATATATATATA
GAATATACATTGTTTGTATATGTATGTGTATAATTTTTTCTATACAAAACAAAACGGTCT
AAAGTAGAGAATGGTGTACGCGTGCATTTTTACATCAGAGGAAGCAGTGCTCAGCTGCAG
GGACGTCGTCCTGCGAACTCCGTGGCACGGGTTTGAATCCCAGCCGAGACCCTCCCGAGA
TTTTTGTTTTTTTTGGCGGGGTCCTTTTGTACCGAACGAAGGATGTCTGCGTAATTAAAT
AAAAGACATTTTTTTCCAAAAGATTCATGTCATGTTAGCCCTGACAGGCGGGCTCCAACG
ATTAGATACGTCGTCAATAAATTGTTATAGTGTTTTAGACCATTTTATAAAAGAATGTCT
TAAACATGATACTGACATGTAAAAGTTATGAAAAATGATACTTTAAAAGTTATTAAAAGT
TAAGAAAAATGATACTGACATGTACTATAAAAGTTATTAAACATGATACTAATTTACACG
TATTGCCTCATTTATGATATCTTCGTGCAATCATCTCTTCATACAAGTCGTTGCTCTTCA
AATGGTCTAGGCCTTCAAATGTACTCGTATATATGACTAGGGTAAAGGGGAAAGAAATCC
TTCTAAGTTTCAAACATCATTTTGGTAGTTTTATCTCCATATTTCGAGACACAAAATGTT
TGCTGGTTAGAGCAACTCTAGCAGACCCCGCATCCGGTCGGCCCGCAAAACGTGTTTGCA
GTTCGTGTAAAACCGTTTTTGCAGGCCGGCGCGGACTGACACAGATACAGACCCCGCATA
ATGGATCCGTAAAAAAGCATATTCGCGGAATATACTTTTTTACGGGTCGGCTTCTGCGGG
TTCTTATCTAGCACGGCTCCTCCCGGCCCGTAAAACTTAGATTTGCAACTTAAATTAATC
TAGCACAATGCTTTTCTTTGCTTTTGCAACAACATCAAATACAAAAGATATCATCAAATC
TCGGCTAGAATAGCAAAATCAAAGAAAACAAGAACCATAAGTATGCATTTAAGAAGATTT
CCAACTTCCATAATTGCTCCCACTAGTTGAAGCAATATCTTCTGCATGCACTCATTGTTG
ATCTACAGATTCTTGATCTTGCTTTCTTCATTCTTCATTTTTGGTTCTAAAGAAGTAGAC
GTTGCTTCCCCTCTAGTTGTACATGCAGCCCCATCATTGCCTTCGATTGTACTAAGGAGT
GCACTAACATCTATTAAGTTTCTTTCTATCAACAAATCAATGTATTGGCTTTCCCAAAAC
CAAATTAAGCATCCATCGTCCTACACAAAAGAATGAGCAAGCTCGAAGTGAGCTACCACA
ATTGAACTAAAGAATGAGCTATGGAACGAGCTACCGCAAGTGCACGTACCCC
