Contig Data
morexGenes
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Map Locations of contig_90548 (5752 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_90548

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80445 2 2114 bp MLOC_80445.1 Available Available LOC_Os12g05420.1, FRAME:+3, EVALUE:0.0, 13112.m00546 protein calmodulin-binding protein, putative, expressed





CDS Structure of MLOC_80445






Contig Sequence (5752 bp)

>contig_90548 5752 assembly3_WGSMorex_rbca.fasta
CGAAGGGGCGGGCAGGTGCCCTTGGGAGCTCGGCGTTCTGCTTGGCCGGCCCTGCGCCAA
TGCTTTTCGGCCTCCCCGGCCCCGACGACGACGACGATGACGCCTAGGGCTACATGGACG
CAGTTTTAGTTTTTTATTTTATTTTTATTTAATGTAATGTGAACGCGACGCGTGAACTAT
CGCCGGCCTTCGTGACCGGTTTCTAATGTTTAATTATGTATTATGTCTTTTTTTTAGACA
AAAAAGAGGTCCGGTCAGCGTTGTGCGCACGAGCCGATCCATTTGCGAAAGCAAACGTTC
GTGTCCGCCTAACCGATTCAAACAGACAAAAAAGAAACGAAATCGCTGTCCTTTGGAGTG
AATTCCTATTCAGGAAAGCTACCAGTAGTAGCGGACCATAAATGCGTTTGGAAATAGACG
TATGTGCTGCTCTAGAATCACATACATTTGCATGCAGCGTGCACCTGAGGAGACGTGTGA
GTTGTATGGACAGGAATTCTGGAAATACACCGGAGTATCTATGTGCGGCTCCTATAGGAA
ACGCACGGTGGACACGACCCGACCCGGCGGTCGATACCACACACTATCGGCGACCGCGTC
GGCATGCAGCCCGTCATGACCGGCAATCCACGTCACCGTGGACCTTGGCATACACACACT
CGCATGCCACGCCTACTCGGCAGGCTGAATAACATAACATTTCTGCCCTCTCTTTTTCTT
TCTGTTGTTGCCGGGAAATCTTTCTGTACGCTGCCCGTAGTTCCCGCCAGCAGGAGAGAA
TACTACTCCTACACTAGTAACTCAATGAGCGCATTAAATTAAATTATTCTCCAACAACCT
CTCGTGTTACACCTTAAATTCCTGCTGCTGCTGCCGCCTCCTCCTCCTCCCCCTTCCTCC
TGCTTGATAAGACTACAACCATTAGTCCACCATTACCTTGATAGATGGAGGTGGAGACTG
CGATGCCTACTCCGGCGGCCGGGCTGGACCGCGTGGGCTCTGCCGCGCGGGAGCCGAATC
ACACGGAGGCCTCCTCGCCGTCGCCGGCGGCTGGAGGCAGCGCGAATGGCGCGGCGACCA
AGGTGCAGAAGGTCTACCGGAGCTACCGGACCAGGCGCAAGCTTGCCGACTCCGCCGTCG
TCGTCGAGGAGCTCTGGTAAACAGATCCTTCCTACACACACACAAAAAAAAAAAGATAAC
ATCACCACCGTGCCTGTTTCCTTTCTCCCATTTGGTCGTCTGACAATTTTGGCAAAGAAA
ATCGTCCAAACCCGTCTTTCTTGGGATTCTGCGCTTATTGCTGCCCTTTTCTTGCTTGTT
AGTTGTTGCCCTCCCGTGAGACGCTGATTTTGGTGTCGGCAATGCCTGATTTGCTTCGTC
CTGATTTTTTTTTATTTTTTTTTGGAAAGGAGGCCTCCGGCCTCTGCATCATTGATTTGT
CTTGATGATGGTTACGGGTGCTGAAAATCAAACTGTTTTTTTTTTTTTGTTTGGATTGAA
TGAAGGTGGCAAGCGCTGGACTTCGCGCGGCTAAACCACAGCACCGTCTCCTTCTACGAT
GGCCCGGAGCCGGAGACCGCCGCCTCGCGCTGGAACCGCGTCAGCCTCAATGCATCCAAG
GTCTTGCCGCTTTCCCTTTCCCCGCATCAATCGCCAGCGCAAGGCAGCTCACCATGGCCT
TTCCCCTCACAAGAGAATGATTCTTTTGACTGGAATTCTCCTCGATTTTAACTCCAACAC
ATGTTCATGAGCTTGATGCAGGTGGGTCAGGGTTTATCCAAGGATGCTAAGGCTCTTAAG
CTGGCTTTCCAGCACTGGATCGAGGCTGTGAGTACAGAAATCCTACACATCAACTACTGA
TTTTAATCTAATTTTAGTAGTACTAGTGTTGTATTCGTTGCCTTTCTCCGCTCTCCAAAT
GAGTGTGAAAAGAATCAGCTTCGCAGTATCAGTTGACTTGGACTTTCCGTTAGCTGCGAA
CATCCATGATAAAAGCTCTACAGCTTTCACGGTTGACTTGGACTTCGGCTTGCAAAATTT
TGAAATCCATCTGCCATCTTGTAGATTGATCCAAGGCATAGGTACGGGCACAACCTGCAT
TTCTACTATGATGCCTGGTCCCAGACCCAGGCTGGCCAGCCGTTCTTCTACTGGTAAGGA
AATGACTGCCATTGTGTATATCAAAATTTGGTTGTTCAAATGAAATGAAGCAATCAATAT
GTAGCTGTCATTTTCCTGCGAGATAAGTCTGATCGATTTTGCACGAAAATTGATAGGTCC
TTTTCTTTTTGCATATTCAGGCTCGATATTGGTGAGGGAAAAGATGTAGAGCTTCCAGAA
TGCTCAAGGGCTCTGCTGAAAAAGCAATGCATAAGATATCTTGGTCCAGTAAGATCATTT
GCATAATGGATGCTATCTTTATTTGGAACGATACCGTTCTTACTGAAAATATTTCACTGA
GAGCTGCATTAGAACTTCAGAGTGCTAAATAATATGTGGATCAATTGATAAAGGAGTTAA
GAACAATAGTCAATACATTATTTAGTTTGTAAGTATATCTATTTAGTTAGAAAAGAGATA
GCTTAAAATAGGAAAATATTGACAGTTTTTATGGAATGATATTTAGTTAGGCAAGAGATA
TGTCATTTAGTTGGTAAGGGTATCTCAGGTGCAAAGACAAAACTAAGCCAAAGAGCCTGC
CTAACTTCGACAGGGATTGGGCCGTGCCAGCATCTACATGAGAACGAGTGCACTCTCCTC
CGTCTCTGGACTTCTGCAGCCCGCGGCACATATATGTTTTAATGCTATTGCAAAAAAAAG
GGCAGCCCGATGCACGTTGCTCCCGCTTGCACAAGGTCCGGGGAAGGGTCTTAATCCCAT
TGTAAAAAAATAAATACTTCCTCCACCCAGAATTGTAAGGCACGCGCGCGCACACACACA
CACACTTCTCAAATTTGCTGGTCAATAGTATGTGGATAACGTTAATACAAAAATTGGTAT
CGTTGGATTCATCCTAAAAGCACTTTTCAGTGGTATCAATTTGTACGAGACAATCCACAT
AGTTGGGCAAATCGTTGGTCAAAGTTACATCTTGGAAACGTGCATTCCTTCCTTATATTT
CTGGAGAGAGTTATTGAAGATAAATTTTACTGCCAAAGTTCCAGAAGTCTTGAATTATGT
TTAATGAGGTCATAGAACTCCCTAGCCTTTGCCATTTATACTTCTATTTGACTGTTCATC
TTAACCACAATACACCCAACATGTTCAGATTTGTCATGACAAATTGCCACGTGAAAGTTT
GGAAGAAGATTGTTGAGCATGAACTCTGTAACAGTTGTCTAATATTTTGCAGCAAGAGCG
TGAGTACTATGAATACATCATTAAAGAGGGAAAGATTATCCACAGGGTATCTGAAGAAGC
ACTTGATACAAGCCAGGGCCCTAAAGGGACAAAATGGATTTTTGTTATGAGCACAGCAAA
GAAACTTTATGCTGGGCAGGTAGTTTGATAACTCACATCATTATATTGCTGCTGAGCACT
GTTATATCATGATTTGGAAGATCGCAAATTTTAACATGCTCCATCTTACCCCTCTTTTTA
CATGTGAGGTAAGGTAAGAGCTAATCAGATCACTAATTAATGGGATTAACGGCTCAGATC
TATTATATATCTTACCTCTCATGTGAAAAGAGGGGGTAAGAGGGAGCATGCTAAAACTGC
TCTTGGAAGATTAGCTTCACTAAATGTTCAACTTGTATGCTTATTTCTATATCCAGAAGG
AGAAAGGTGTATTCCAGCACTCCAGCTTTTTAGCAGGAGGTGCAACCATAGCTGCTGGAA
GGTTTACTGCAGAAAATGGAGTTATCAAGGTATTGTCGAGAACCACCATCCTATCTTAGT
GCTACTATTTACACTTAGATATTACACTTGGTGAATTGTTACTTAAATATTGTATTTTAC
ACATAGATTTTAGAAAAGGAGGATAACCCCGGCCTCTGCATCTTTGTCCCACAAGATCTA
GCATACTCACAAAGTCACAATTTTGTTCTTGTGCTTTCTCCTTCGATGCATTGTGCTAAT
ATGATGCTTTGGTGATCTCTTCTCATTTCAGTCCATTTGGGCCTATAGTGGACATTACAA
GCCGAGTGGGGAGAACCTTAACAACTTCATGAGCTTTCTAGAAGAAAATGGAGTTGATCT
GAAAGAAGTTGAGGTATACTATTTTTGGTCCAGTTAAATCTAATCACACTCCTATGTGTT
ACCAAATGTAAGACGATTCACTTAATCAACTTATTTTGGCATATTCAGGTGGGCTCATCC
ACCAAGGAAGATTACTATGAAGATCCAGTGCCTAATATCAAGCAGAACCCTGCTGCTGCT
ATGATGGCATCCAATACTCCACAATTGATTCTGCCTTCCAACATGGTAGAAGAAGACAAG
GCATCTGGGCCATCTTCACAGACTGAAGCTGACGAGGACAATAATGTCCGTGTGGAGCAA
GCAAGGCCAACCTACCAAAGAACCTTATCAGGTGGCCTGCAAAGTCCTAGAGACGCCGTC
GTCTCGCAGGATGCAATTCTTGAGAGGGTGAATTCCAAGAGCAAGTCAAAATCCTATCAG
CTCGGCCACAGGCTATCCCTGAAATGGAGCACTGGAAATGGTCCAAGAATTGGGTGTGTG
AAGGATTATCCGATAGAGCTCAGAATGCAGGCGCTGGAGATGGTACAACTCTCGCCGAGG
GCGTCGACTCCTCCGGCCTCGTGGAGGGTACCATCATGCCTCTCCCCCACCTTGCCAACG
CCGCCGCTCATGCCATTGCAGGCATCCCTGCCCCAGCCAAGTTAGGAACTTGAGTTTAAG
GCAATAGCTGTGTAGTTCTGCTGCTTCATATTAGCTGGGTGCCGCAAAGGTCACAAGTTT
GCGCTTGCTGTTTTACCTAGTTCCATGAACCCGTTTGTAGCTCGGATGGATCCGGTGAAG
ATTGTATGAGTTCCAATTTGGTCGAATTGATTTAACAATGTATGATTGCACCTTTTCCCG
CCAAATATCATTATTGCAGAAATAGCTTCAACAGAGTTTCCTGTTTCACATGTCATAATA
CGGTTGTATGCTTGCTTACGACAACCAGAAAACATTCAGGGACAAAGCCTACAAACCATG
ATCAAATTCAAGGAGAATCTTTGACTCACAAGAGGTGCATTTGAAAATTTCTCAAAGTAT
CCTCACTGACATTGCAAACAGATACATCAGAATTGCAGAAGGCAGTATCAGCGATGAGGA
TGAACAAGTCAAAATTCGCGATATCACCGGATCAGCACAACGTTTTAAATCCATCCACCA
GCAGTTCACCTGGTATAATGTGTGAATATAGTGTCATCAGTACTAGACTTAGTCATCACT
GGCGCAGCCCCTGCAGCCACAGTGAACACTCTATGACCTGTTCTTCACTCAGATGCTTAG
GACTACAGACACATGTAGTTGCAAAGCTGTGATGTCGTGTCTGGATGCAGTGGAGCCAGC
AGAGACGTTCTGATGCAAATTCAACGTCAGTTGGCAGTGCAAGTTAAAAGTAACACTTTT
GCTTCGGTACACCCCCAACAAAACGTAGAAGGGGAAACGTATACCCACCTCGTGTTGTAT
ACTATTGTACACTACAGGAGACATACGTATACTCACCTCGTATTGCATACGTACGGCGGC
CTATAGTGTACAATACGAGATGGGTATACGTTCTTCTTTATACGTTTTGTGG