Contig Data
morexGenes
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Map Locations of contig_90480 (3617 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_90480

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80432 1 1968 bp MLOC_80432.1 Available Available LOC_Os01g13180.1, FRAME:+1, EVALUE:3e-61, 13101.m01448 protein expressed protein





CDS Structure of MLOC_80432






Contig Sequence (3617 bp)

>contig_90480 3617 assembly3_WGSMorex_rbca.fasta
CCGCCGCCGCCGCCCCTTCTTCCCTTGTCTCCCCTGCCATTGCCGCATCCATGCCCTCCG
GCTGATGCCCTCCAGATGCCGCCGTCACCTCCTCTGCCCCCGCCGCCGCCGCTACCCCCC
GTCACTTCTCATCTCTCCCGTCTCTCGTCGTCGCCGCCTCCACGCCGTACTCTCCGGAAG
CCGCCGCGCCGTCGGACTCCGCCGGTGGGGGGAGCCTACTCGGCCTCCGAACTCCCTACC
ATCGTGCTGGCCCTCGCTTGTACGGCCCCTACCCGGCGGGCGAGAGGGGGGCATTCTGTC
GAACAACTGGTGCCCGCGCGTGGGTCTCCCAACACGCTGCCCGCCTGCGACACCGCATCC
GGTGAGGGCCTCGCCGGCGTCCCTCTGGAGCTGCTCCCGCCCAAGAAGAGGCTCGTGCGG
TGCCACCAGTACGAGGCGCCCTCTGCGATCCAGGAGATCGCCGGCCACGGCGGCGGCGAC
GGGTTCAAGGATCGGCCCGTCTCCCCCACCGTGGAAGGCGACGGCGACGGCGACGGGTTC
GGGAATCGGCCCGTCTCTCCCGCCGTGGAAGGCGACTGGTTTGGGAATCGGTCCGTCTCT
CCCACCGTTGACGGCGACGGCGAGGGGTTCGGGAATAGGCCCCTCTCTCTAACCGAGGAA
GGCGAATGGGACGGCCACGGCGACGGCGAGGTGTTCGGGAATCGGTCCGTCCCTCTCGGC
GTGGACAGAGACGGCGTCGGCGACGCCGGCATACGCGGAGAGGAGCCTCAGGTCTACCGT
GACGACGACGGACTGCGCGCCGAGCTTCACCGCCTCCACGTCTCCCGGCCGTCGCTGGTG
CTGACGAAGCGTCTGACCCTCTCGGACCGCAGCCGCGACAAGGCGCGTCTCGTCCTCCCG
GACGGCCTGGTGAGGGCCTCGCCGCTGCTCAGCACGATGACGCCGGGGGAGCGGCACCTG
GTCCTGGCCGGCGGCGGGCTGGCTGTGCCGGCGCTGGACCGCCTGGGCCGACAGTACCGC
ATGATGCTGAAGCGCGACCGCCTGGCCCGCACGTACCGCCTGACGGGCGAGTGGTCCCTG
TTCCTCTCGCGGCACGGCGGCATGCGTGACGGGGACGCGGTGGAGGTGCTCGCCTTCCGG
CCGCCCGGATGGCAGGCGCGCCTGGGCAGGTGCGGCGAGGGCGGGCTCGGCATGGCGCTG
CTCCACTGCCGGCGCCCGCGCGCGGCCCCGGCGCCGTCCAACGCGGCAGACTGGAATGGC
TGGGAGTGCAACGCGGCAGACGGCCTGATGCTTCCCGGCGAGGACCCTGCGAGGGCGGAA
CGATTGCCCCGGCGTCGCCGGCGGCGAGGTCGACCCGTGAATCACAACGGCCCCTTTCGT
CCTTCCTAGGCGTGCCTGAGCAGTGAGATCGACGGGGAGGTAAGGAGTTCCATATAGAGT
AGAGTTCGTGCTGAAGCTCGTGAGCGTGTGGCGGCCGCCGGCGACGTTGGTGGACGGTGG
CATGCCGTGATTTTCGATCAATGGAACCGGCAGCAAAGCGATCAATGGATGGTTTGGTGG
CAGTTAGAGTCTCACTTGTAAGCTGCGCATTTTGGCATATGCGAATGAAATATAAGAAAC
AGTCGAATTTGAGGTTGAAGGAGGCGGATGTGCCTGCCCTCGTTGTTTGGTTTTGGCTGA
TGTTTGTGCAACTGAAACTTGCATCGCGGTCCCAGAGAATCTCCATCATCCGTGCCTCCA
ACAGGCCCTCTTCAGTCTATTTTTTTTTCCACCGGCGAGGGAAAAAAACAGGCCAGTTGC
TTTTCCATGAGCCCGTTTTTCGTCGATTAGGGTTGAAATTGGCCCCGACGATCTCAGCCC
GAACCCAGCACGGAAGGAAAAAAAACGCGGTGTCCCCTCCCCCTGGCGTCAGGCGAAAAA
AGGTTTTTTCTTCTCCGGATCCGCCCCTCGCACACCACACATTTCGCCATCGTACCGATT
TCGGGACCGCCCACCTACCTACCGTCCCTACAAATACCACCTCCCCGTCGACGAATGTAG
GGTTCGTCGCGGCTTCGCCCCTGCTTGGCGAGTTTTCCTTGTGCTTCGGGCACGTACGCG
TGTGCCACGCCCGCCGGGTGTCCGGCGATTTGCTTGGGCGATGGACTCCGACGACGAGGA
GGCGTTCGCGGCGCTGCTGGAGGAGGAAGCCGATGCCGACGCCGAGGATGAAGAGCACCT
CATGGTCCTCCTCGCTCTGGCCAGCCTGTTCGCGAGCAATGCAAAGCCGAGGCGCGGTGG
CTCGGCGTCGGGCCGGTTGAAGGCAAAGCGGAGTCATCGACTCGAGGACTATTGTTTGCT
CTACGCTGACTACTTCGTCGACGCTCCTCTGCACGGCGATAAAGTATTTCGGCGCCATTA
TCGTATGAGCCGGAAGCTCTTCCTCAGGATTGTGAATTTCATCACGGAGTTCGACAGCTA
CTTCAAGTGCAAAAAGAATTGCACCGACACACTTGGATTCACCTCGATCCAGAAGTGCAC
GACAGCTATGAGGATGCTTGCGTACGGAGCTCTCGGTGATATTCTGAAAGACTATGGACG
CATGGCCGAGTCCACCACCATTGAGTGTTTCTACAAGTTTTGTAGGGCAGTGGTGACAGT
TTTTGGACCTCGATATTTGCGATCACCAAATGCTGAAGACACTGCTCGAATCCTAGCACA
GAATGCAGAAAGAGGATTTATTGGGATGCTTGGAAGTGTCGACTGCATGCATTGGAAATG
AAAAGAGTATCCATTTGCTTGGTAAGGGATGTACAGAAGGCGTCGAAGGAGGTTGCAATG
TGGTACTGGAAGCAATGGCCACACATGACCTCTAGATTTGGCACTTCTTCCTTGGTATGC
CAGGAACTCACAATGACATCAACGTACTACAGTGCTCGAATGTCTTTGCCAAGCTTGTTG
AAGGTCATGCTCCTCCGGTTAACTACGAGCTCAATGGACACCACTACAACAAGGGAAACT
ACCTAGCAGATGGCATCTATTCGAGATGGTCCACATTAGTGAAGCATATCTCAAATCCTC
CACCAGGAGGCAAAAACTCGTATTTTGCCAAGCGTCAAGAAGCTTGCACGAAGGATGTCG
AACGGGCATTTGGTGTGCTTCAATCTCGTTTTGTTGTTCAACGGTACCCCCCCCCCCTCA
GACCTGGTTTAAGATCAAATGTGAGAAGTCATGACTTGTTGTGTCGTCTTGCACAATATG
ATCATTGAGAGAGAGTAGGAGGAGCCAATGTTTGACATTGAACCATATTACAGGCAAGGT
CCTCTTGCCCAAGTTGATCATCAGCTACCGGCAACCTGGACTGCCTTTCTCAACATGCGT
CAGGAGATTCGAGACCCACAAGTGCATCAACAACTACAACATGATTTGGTGGAGCACCTA
TGGAGGCTCAAGGGCAACGCCTAGCTCGATTTTTCATTTGTATTGACTTGTTAAACTATT
TTTTGATTTGTATTGATTTCTGTGATGAACTATGTTATAAGAAAATAACTACTATTGTTC
AATTTGTGTCGAAGCATGCTGAATATGGGCCAAAAGTGGGCCAATTTTGCACCAAAAGTG
GGCCAATTTGCACCGAA