morexGenes - Barley RNA-seq Database

Contig contig_90473

Source Contig contig_90473

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_90473 (2094 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_90473

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_80429	2	1104 bp	MLOC_80429.1	Available	Available	None
MLOC_80430	2	801 bp	None	Available	Available	None

CDS Structure of MLOC_80429

CDS Structure of MLOC_80430

Contig Sequence (2094 bp)

>contig_90473 2094 assembly3_WGSMorex_rbca.fasta
TGTAGTCATATTGATTATGACATTTCGTAATCCTTATTTTGAATTTACGTCAAGATTTGC
AAGAGAGAAAAAATCAATTGCAAAACATAGTTGTTGCACTTATCATAAAAAAAATGCTAG
TTTCGAGGGTCCATTCCGGATGGAACGGTCGATGCACCCAATTATATAAGCACACTTTTT
CCATTGGGACTCAACCAATATGATCAATGAGATATTAACCAAAATCAAAAATAACATTTA
GCCTGATGGCTTTCTATTGAAGTAGTTCTACTAAGCCTGATGGCATGCAAGGCTGAGGGC
TAACTTTAAATTCCTAAGAACCAGATGGCTTGATATAGTATATTTATCCAGTAATACAGA
CTACCGTACTGAATAGTTTGGATAAGCCTGAGGGCTGAACCAAAATTACAGGGAATTTTT
AGTAGATAACATGAACGTGAAGGATTAAATTGAAGAACTAACGAAGGGATAAGGTTCCCT
ATCACTTCCTTCCCGTGAGTGAATAGGAATCAATTGATTCCTTGGCCGCTCCTCTTCTAC
GCCGGTACAGCCGCCTCTGTGAGACGCTGGAGGATTCTCCTTGCTGTAGTGGAGTAGTCT
CCTTGCTGGGAGGGGCGAGGGTGGACCGGCTGTGAGTTGTGCGCCGCGCGCCATCCCGCA
TGGAGCCGGGTCGAGACTGGACGGCGCACGTCGTCGTTCACCGCGACAGGCCGAGGCGAG
GGCCACTGCCCACTGTTCGTGAGGAAGGGTGAGCAGAAGGAGTAGCAACTGGCTGCCGCC
ACCCGTTTCTTCGCTTGAGGCAGAAAACCGAAGGTCATCCCTGCGCCGGAGTTCGCATCC
GCGCGCGTGCAATGATGAGGACGACGAAGGTACGATCCTCCCAGACTGAGCCTTTTTCTT
CTTCTGTGCTTTTGTTTGTAGTTCACAATTGATCGATTCTCATCTTCGCCGTGATCGTGT
GGTGGCCGAAACTTCAGCAACCAACTTCTCCGGCCATCTTTAGGGCAATTGCAGATCGTC
GGAGCGGCGTCCGCTCTCGGTAGAGGCTAGCGTGGCTGATAACGTGTGAAGAATAAAGTG
TAATATGAAAGACGGAGAGAAAATGATGGAAACGTCATCTCATTGATTGAAGATTTGGGT
ATATATACCCTGGTACAAAGGCGGTTTACAAGAAGCAGTTGCCAAACTAAGAAACCGACA
TAACTAAGGATTATCCCCTAATTAATTTATTCCTAACAAAAATAAACTTGTTTTTTCTTG
AATGAGAAACCTCCCAAATAACACCTCCCCCGCAATCGAGCCCCACGCCGTCATCGTCAT
CTCGCACGTCTCCTCCTCCTCCACTCGATTTCCCTGATCCCCTTCCCGCATGTTGCCTGC
TCACATTCCTTCCCCCTTGACTCGCACGCAGGTGGCTGCAGGGGAGGCGCTGCAGAGGAG
GCTCGTGCAGGGGTGGTGGTGATGGGAGTGGGGAGTAATGGAGGCGGCGGTGGCAGCGAC
GACGGCTAGGAAGAGCGTGTGCATGCCCGGCGCGGGAAGTTTCATCGCTTCGTGGCTCAT
CAAGCTTCTCCTCTCCATGGGCCACTAAATGGTCCGCGGCACCGTGCGAGATCCCGGTAA
GGACCCTCCTCGCTTTGGTCCGTCCTTCCGAACCCTCGAAGGTCTAACCTCAGCTCATGC
TCGCACTGCTCCCGCCCCACGATGTCGTCTGCGTCAAACTGAAAGCCACGAAACCACGGA
GGACGGGGACGAGGTCAGGGTGTAGATGTGGACTGATTTCTTTGTATCTCCCGCTGAAGA
GTTTGAAGGAGTTTTTTAGACAACCTTGGTAAAGAACCGATTCTGGTTGATTTCTTTGAG
TTTAATGTCAGGGCCTCTGGTGGATGCACAAACATGTTCCTCTCCCAGCTCAGCATGTCA
TTTTTAGATTGCGTTCTCTGCATCAATCTCAAAAGGATTTGCACTATGTACTAAGAGTAT
TTTCATTTCGCCGAAACGCAATCCCGCGCCCCTTATTTGCTGCGCCGGCTCCCTCGCGCG
CGACTCTCCCGCGCTCGCTCCTGCTCTCTCCCGCGGTCGCTCCTCCTCTCTCCC