Contig Data
morexGenes
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Map Locations of contig_90203 (2454 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_90203

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80384 4 1667 bp MLOC_80384.4 Available Available LOC_Os09g28730.1, FRAME:+1, EVALUE:8e-174, 13109.m02835 protein gibberellin receptor GID1L2, putative, expressed





CDS Structure of MLOC_80384






Contig Sequence (2454 bp)

>contig_90203 2454 assembly3_WGSMorex_rbca.fasta
CCAGCCTCGCCGCCTCTCCCTCCCCCGAACCTCCTCCACCTTTGGTACTCCTCCGTCCCC
GGCCATCTCTCTAGCCCCGGGCCTCATCGGTTTTTTCTCTAGCACCCCCCCTCCCCTCCC
CCGCATCATCGTTCTTCCGCTGCCACCCCCAGCATAAGATAGATCACGAGGAAACTTCTC
TGGCTCTTTCTTCCTTCCCTTCGACGCCTCCTTTCTTCTAGCGAAAATCTACTTAACCAA
ATTGGATTTTCACGCGACAGATGTTTAGCTAACGTGTGTTAAAAAAAAGGTCATATATCA
TGGGAACAAAACTGGTTTGCTTGAGATTTTAAATTCAATCAAGCTGTTTGACCTTTCTAA
AATAAAGTGAGCATGTCGTGACCCAACCCAAGGGCACAAAATTCACGTTTGATCCGGTAG
CGTTCGTTTGAAAACCCACCCGCACCAGATCTCTACAGATCCCACCGTCCAGCTCTCTTT
TCCTTAACGGCGACCTACCAACAAACGGACAAGAAAATGCCAATTTGTGCTCCAAAATCG
TCGCGACGATTGCTGTGGGCAGCTCTCCTCGTCGCCCCGCTCGTCGCTGCGCTCTACCAA
TTCCCGATCCAAATCCTAAATCCCCGCGCCCCAGAGCCGAAGGCCGCCCCCGCCACCGCC
GCCATGGACGCCGGCCCCGAGCTGGAGCTGGAGCTGGAGCTGGAGTACGATATGCCGGGC
GTCCTGCGCGTGCACAAGAGCGGCCGCGTCGAGCGCTTCGACGGCGTCGAGACCGTCCCG
CCCTCCCCCTCCGGGGACCCCTCCAACGGCGTCGCCTCCAAGGACGTGGTCCTTGACCCC
GCGGCCAGCATCTCCGCCCGCCTCTACCTCCCCGCCGCCGCCGCCGCGGAGCCCGGCAAG
AAGTTCCCCGTCGTCATCTTCTTCCACGGCGGCGCGTTCTTCGTCCACACCGCCGCGTCC
CCGCTCTACCACAGGTACTGCGCCTCCCTCGCCGCCGCGGTCCCCGCAGTCGTCGTCTCG
GTCGACTACCGTCTCGCCCCGGAGCACCCCATCCCGGCCGCCTACGAGGACGCCTTCGCG
GCCCTCAAGGCGGTCGTCGGCGCGTGCCGTCCGGGCGGCGCCGAGCCCTGGCTCGCCGCG
CACGGGGACGCCTCCCGCGTGGTCCTCGCGGGCGACAGCGCCGGCGCCAACATGGCGCAC
GCCACGGCGATACGGCTGGGGAAGGAGGGCATCGACGGGTACGGCGACAAGGTCAGCGGC
GTGGCGCTCCTGAACCCCTACTTCTGGGGGAAACAGCCGGTGGGCGGGGAGCCGACCGAC
GCCGGGTACCGCGGCGGCTTCGAGCGCGCGTGGCAGGTCATCTGCAGCGGCAAGTTCGGG
CCCGACCACCCGTACATCAACCCGGCGACGGCCCCGGAGGAGTGGAGGCGGCTCGGGAGC
GGCCGCGTGCTGGTCACCACGGCGGAGCACTGCTGGTTCGTGGAGCGGGCGCGCGCGTAC
GCGGAGGGGATCAAGGCGTGCGGGTGGGACGGCGAGCTCCAGTTCCACGAGACCAAGGGC
GAGGCGCATGTCTACTTCCTGCCCAAGTACGACTCCGACACCGCCGTCGAGGAGCTCGCC
ATGGTGGCGGATTTCGTCAGGCGCTGTTGAGGATCTGCTTGCTTTCATTCAGCAATAAAG
GAGCACATGATTTGTGATGTATTTCGTGTGTTTTCTGCTGTGAATTTGTGGAGTTCATAC
GAAAGGATCAATATTTGCATTGTTGAGCAAGACTTGTTGATGAACTCTTGTTCTGATTAC
AGTTAACACGAAAGGATCAATATTTGCATAGGCAACAAAAACATACGGCAGTGTTCTCTG
ACCTCTGAATCAAGGAATGCGTCCGCTCGGTCCATCAGTGTTGAAGACTCATCCCGAGCC
AAAAATCATGACTACACAAGTGCCGCCATTCTACCCGCCTGGGCCTAGTAGTAGGTGTAG
CAGTCATGGAAAAGATCTTGGACGCCAATGTCTGGTGGCCGTTCCCCACAGAACATGCGT
GGAGGAATGCAATCCCAGCGAACCCCTCCCCCTGCGTGAGAGATCTCTAGCATATTATGT
ACAATATCCCGATCTGTAAAATAATGGTTAAAATACAGATCGGCACGAAAAATGCTGCCA
CACCACGCAAACGCGTCCAACCCGTAATTTTTTTGCGGGGCACGATAAAAATTCGCCCTC
AACCTTCAGTTTTACGGGGTGAGAGGCCGACCGGAGCACGCCCCTTATCCGCAACGAGAT
TTTGACGCGAGGGAAATTTTTCTTGGAATTATGCCCTAAAGGCAATGATAAATAAGTTAT
TATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAATGA
AGACTTAGATACATGTTGGGATACATAAACAAAACACCGTCCCTAACAAGCCTC