Contig Data
morexGenes
Links



Map Locations of contig_8986 (3031 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_8986

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80330 1 116 bp MLOC_80330.1 Available Available LOC_Os03g61560.1, FRAME:+1, EVALUE:1e-11, 13103.m06778 protein expressed protein
MLOC_80329 7 1565 bp MLOC_80329.4 Available Available LOC_Os03g61560.1, FRAME:+3, EVALUE:2e-120, 13103.m06778 protein expressed protein





CDS Structure of MLOC_80330






CDS Structure of MLOC_80329






Contig Sequence (3031 bp)

>contig_8986 3031 assembly3_WGSMorex_rbca.fasta
CCGGCCCGGCGGTACGCAGTAAACCCTCGCCCGTCTTCGCCGACCCCACCTCACATCGCC
ATGGCCGGCGGCGGCGACCGCCCGGGCGCCAAAAAGCGGAAGCGCGAGGCGTCGCCGTCC
AAGCGGGCCAAGGGGAAAGAAGCCCAACGGAGCCAAGGTGAAGCGGCAGCCCGTCACCGC
CGTGGACGAGCGAGTCGCAGCCGAGGTACGTACGGACATGGTTGGAGCACGGGAATTGGT
TTAGTGTATGGTCTGGCTTGAGCTTGAGCTGAAACAGGAAATGTCATTGACTCTCTGTGG
CAGGAAACGCCCGACTTCGATTACAACCTCGTCAAGGTAATTTCTTTTTTTTGCTTTCAT
CATGTTTCCAGCAGCATCAACAAATTCCTGTATGTGATGCCATAATTTGATCCCGGTAGA
AAATTTGCAACTCCTGCTTCTGCTTGAATCGCCACCTCTGTCTGTTTATCATGATTCAGT
ACCACATATATTATGGGCAACTCTAAGTTTGATTCCTCACGGCACCTGAATTTTAACAGG
AACTCAGAGTGCTATGTCAAAGGGTGAGATGCCGTGGTCTGAGCGGCAAGGTTAGATCCA
AGTAAGTGTCACTATCAAAGTCTGAGTTAAGACATATGTTCTACTTCTTATGTACATGGA
TTTGTCATCTGCGCAGGCTAATTACCGAGGCTCTCCGTAAAATAGATGGGAAATATGTGG
AAATGTCTGGATCCCCTGTAACCGCATGTGTTCTTCAAGTAAGCTGACGATATTCATTCT
TTATGAACTCGTTGCATATGGTGTTTTGGTACTTATTCTGATAGCCACCATTTTTTTGTC
AGTTATGTGTGAAGTGGTGCTCAGAGTCAGAGAGGGATCCTATTTTTCTTGCCCTGCAGC
CACATTTGCTCCATCTTTCTCGCAATAATAAATACACTGGTTTCCTTGTGAATTCTATCA
TAAAACGGGGTAAATTTCTCTATCATTCGCTAAAAACTCATATGGGTTCATATGTGAGAA
TGTTGCTTGTTTGTTCGAGGTACCCTTAGCTTTCACTAACGTACCTCTTGTTTGTGGCTG
CAGCCAGTCAAGAACAGTTTGTCTTGTTGTCTCTTCCCTTCATGGTCATGTTGCTTCTCT
ACTTCGTCACACGATAGGAGCATCAGGTATGTGTTGCTATTTGTTATTGTCATATAATGG
GTAGGAACTCGTCATCTATAGGAGCAGCAGGAGTTAACGGTTGAATGCCATTGTCCGCAT
GCGTTTCTATTTGCTAAGCAAGTAAAGGGGTACATGGTAATCTCACATTGAGATGTATTC
TTTCTTGCAGTTGTTGACTGCGCCTTTCATCAGGCGACGCGGCCCCAGAAAAGAAGTTTG
TTGTTGGAGTTGTACTCCACTGAGCTTCAGCTGTCCAAGGACCTGGCTCAAGAAAAACCA
TGCAGGCTCAGGTTGGCACGCTATAATGTCTTAGTCATACATCTTCTTTGAGGTTTCCTC
TTAACTTTGTTACTTCTCTGTACAAAACTTAAACTTGGGCGGAGGGAAACATTATTGTAG
TCATCCAATTATCCTGCCATAGGTGGCTGCAGTTATTTACTTAGTTCAATATCCTAAAAT
TCAACTTCCTTTTTCAGTGTGTTAAATATAATTTCCAAGCTTGGACTACAGAAATCATCT
GTCCTGCAGCATATGACTACTGTTATCCAGCCTGTTCTGGAAAAGGGTATTGTTCAGTAT
TCCATAGCACACATGGTCATATTGGAGTACTTAACAATTGCGGATAAGGTAAATGTGTTT
TATTGTCGTGATTGGCTTATCTTTATAAGAAAGCTCTCCTTTTTTGGTGAGATGTTTCTT
CAGCTTATCACACTATCTAATATATGCATGTGTTTCGTAGACATCAGCCTTGGATGTGAT
TCGTCAGTTAATCCCCCATCTTACTCGAGGGTCATCTTTCCTAGATGAAGATGTGATTGG
TCAATTAATTCCCCATCTTACACCAATGAAATCAAAAGCGAAGAAGAAAAGATCTTCAGA
ACCACTTCTCATTCGGATCATGCAGACGAAGGAAGGATTAAAATTAGGGCTTGCTTGCCT
CAAGCATGGTCTTGCGAAGGTAATTTTTTTTTTCTCTTTCCGTTTTCTTATTGTATCTTA
AGAGACAGATTTTAGAGCGATCCCTTTGTTTAACTTTTCCCACTCATCTGTTTTATCCGA
TGTTTATTTATTAACTTCTGTAGATTCCAGAGACACTGAATAGTCATGCAAATTGAACTG
TGCATTAGTTAGTGCCTCACGCTGCATATTCAGTAGTATTTTCCTTCTCGCTTATTCCAG
TGTGCTTTTGCCATTTAACACGGCAATGCATTTCAGGATAGGAAGAGGATTATCAAAAGC
TTGAAGGGGCATATTATGAAGCTTGCTCTCGATGATTATGGATGCCTTGTAAGTGATGTC
TATATATGTAATATATTTTAGTGTTTAAATAGGATCGTACTGTGTGAATTCTATGCTTTA
ACCTATACAAACATTCTCCCAGTGCACAGTAACTTCCAGATGGTTTTATGCTTCGAAGCA
ATTAGTCCTCAACTGAACTAACATGTCTTTTTTCCTCCAGTTCGTTATTTGTCTTCTCTC
CATTGTTGATAACACAGAACTTGTTATTGAGGTTAGCCAGCACCAATCATTTGCTTGAAG
CAAGTGTTATGCTGCCATTATAAGCAATCTGAAGAAGTGAAGAGACAATGTTTATAGCTT
GCTTTCAATATTTATAGGTTGTAGTTGATGAGCTGAAAAAGCAGTTAAAGGAACTCATAT
TTGACAAGGTAAAAGGAATTCCAAGCTTCTGATGTGCTTATTTTTACTTGTTAATTATGT
TCACATGAGACTATTTATGATGGAGCTACTTGTTGGAACAGAACGGGAGACGCCCACTGC
TGCAGCTATTTCACCCACTTTGCTCACGTTATATGACTCCGCGTGAATTGTTTTATCTGA
ATTACAACGTGCCTTCCCTTGTTTCAAAGGC