Contig Data
morexGenes
Links



Map Locations of contig_89779 (5897 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_89779

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80320 6 1975 bp AK358814 Available Available None





CDS Structure of MLOC_80320






Contig Sequence (5897 bp)

>contig_89779 5897 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGCTTAGCCTCGTGCAGGTTCTTCTTGCCTGGAGGAGGCCGACG
ATTCTTCTGGTTACCCTGTCCCTTGTTCTCCATCTCTCCCATCACCACCTGAGCAATGGA
TCTAGATCCAGATGCAACCCCTTTCGAGGAAACTTTGAAGATAGTTGGAGTTGGATCAAA
ACGACCCACGGATCTCACACGGAACCAGTCTTGTGGAGAGAATTTATTAGCTATGAACAT
ATCTTTCCTCACCCAAAAAAGTTTGGGGAATGAGGAGCTAGGGTTTGGGGGGCTGGGCTT
CTTCTTACAATGCCTCTGTCGACGGCACGGGAATGGAACCACCCACAATTGGCCAAAAAA
AATCCACCATCTCTTCTGACATTTCGTGAGACAGGAGGGAAGACGGCTTTTCCTTTCCCG
CTTTCTTCCTGACCACACATCCCTGGATTACTGGATCGGGGATGATCGGACGGCTCCCAG
GGATAGCGGGCCAAATCAAATCCAGTTCCCCCTGATTGCAGAAGCAATCTCCCGATTATC
CCCCAAATTTCCCTCAAATGGAACCTAGTTATCATCTACACAAGCTCCTAATTCATCAGG
ATGGGTAACCCCCAAACTATCTGCTACCAATTCTCGATTATTCTGTGTTAATCTCTCAAT
TGGATTCATGCTAAGACTAGCATCCAGGCCCAAATCACTCTAAGGGACAACCCTCAAAAT
ATCATCATTATCAACTAGATTTCTATTAATCAACATGAACTGACATTGTTGCGAATGATA
AGAAGATTGGGCTCTAGGATAACGAACGTGAACAGACGACATGACTGCTCCGCGATCCCC
CGGCCAGGGAGGCGGCTCCAGATTGCCCCGCCGCACCCTCCTGACGGGGTTAAGCCCCCT
CAGGGACCCGAGGAAGCACCGTCCCCGGCGGTAGGAACTCTGGGGGGATACTTGCGATCT
CCACCACCGGAGGAGGGCGGATGTTGAGTCTGGATGGATTATTTGTTCTTAATCGCACCC
ATCTCGGTGCTTGAATCGGATCCGCGGACTCTGCCTCCTGAATTGCCCAGAACACCATCT
CGTAGTCCATCGACCCGTTGTCCCCGATGGACCGCATCCTCTCGGCGAACTCCGAGCTTC
GTATAATCTTGACGCAGATCTCGGGCCACCTTGAGCGATCGGGGAACCTCTCCCTCACCA
CACGCACCATCTCCGCCTTGGCCTCCGACGTCGACGATTCCACCCACGGGAGCTCCGTCA
ATGGGAATGGCCGCAGTGACGCCGACAGCGGCTCCGGCAGTGGCTCCTCCACCATCGAAG
GTTGAGCAGCCGGCGGCGCCACCATATGCGCGGGACGTGCCCACCTCGATCTCGCCTTGT
GTCCTCTCACCATTTCGATGGATTGAGGAAGAGGGGAGAGCAAGCGACGCGTATGAGAGC
ACGAGGTGGGTGGCAGCGAGGCCCTCGCTATCCCCTTGATGGTTGAAGTGGCACCATTAA
TGGGGGTAGGTGGGCGCTCGCCTTGCGAGTGGGTAGGTGAGGTGTCGGTCATCCCGTCGT
GGGTCAGAGAGAGAGAGATGTCGCGTTCGTTTACTATTGATGATACACTGCTAGTGTTGA
CCCGCCACCAATATTAGAAGTAGAAATCTGCAAAACATAATCTTATTATAGACCATTACA
ACATGGTATATATTCCTAAAACATAACCTGTTTTACACAGAAGGGATTTTACACAGAAGG
TCGGGACCGCATCCGTAAGCTTTTTCCATCAGAAATACGACTACATTGGTTCATTGCGGA
GTCTCGTACAACGGAGCTTGCAGTATGCCCTTGGCTCTTCTCTACCATTTCTTCAGTTTA
GCCTGATGACTGGACGGAAGCACGCAATTGCCTATCTCTATCAAAGCAAAACAAAAAGTT
GAACAAACACGAATCAGATGACGGATATATCTAGCTTTTTCTTTCCGGACAAAGACGCAT
ATATCTAGCTAATAACTACGCACATTTTGCAAACGTGGCCGTGATGGCCCCCCATATAGA
GTAGATCGAACGAGAGAGTGACTCACTTGGTTGCTGGTAGACGACGGAGCCAGCGCCATT
GAAGGTGCACGAACCGTTTGCACGGTCGTTGCGCTGGTAGAAGTCGTTGAATGCGTAGGA
CGCGTGCGCCACCTTGGTGTCGGGGTCGAAGCACCGCCCACCCGGCTGGATGGCGCTGCA
GTCGGCGCCGTGCCCGCACGCGTACTCCAGCGCCGCCTGGAGCCGTGCGTCCCCAGCCGC
CGCGTTCGCTACGCACCAGCTGATGTTCGGGTCGCAGATGCCTACATATCTCCTCAAGTT
AGATAACCATGCAAAATGTTGAAATAATATTCTCAAGTCTACAACTATACTACAAGTATA
TACATATCTCACCACCTGCAGGTTGCTGGAAGACGATGGAAGCGGCGCCGCTGAAATCGC
AGGTCCCGCTGGCCCGGCCCTTGCGCTGGTAGAAGTCGTTGAAGGCGTAGGAGGCGTGCG
CGACCATGGTGTTGGGCTCGTAGCACGGCTTCCCGGGCTGGATGGCGCTGCAGTCCGCCC
CGTTGCTGCACGCGTAGTCCAGCGCGGCCTGCAGGCGCGTATCCCCGACGGCCGGGTTCG
CCACGCACCAGCTGCCCGCGGCAGGGCCCGGGGCAGGGCTGGGGCCGAAGTCGACCGGGT
ACACCGGCTGCCCGTCCGGGTAGAAGAGGCCGAAGTTCTGCTCGTCGGCGGGCTTCTTGT
TCTCGTTGAAAAGGGCGAAGATGTAGGCGGAGACGTCGGCGTCGGGCCGGTACGGGGTGC
CGGCGTTGCCGGAGCGCACGCGCTTGATCAGGTTGGCGTTGAACGCCTGGGCGTTCTCCT
TTGTGGCGCCCACCATGTTCGGACAGTAGGAGCACCACCCGGACTCGCCGGTCTTGGTGG
GCACCCGCTGGCTGCGCCTTCCTCTGCTCACCGTCCCCACGGCGGTGCGCAGCACGCTGC
CAGCAGAGGACTCCAGGTTGTCCATGGCGTAGTACACGGCGTCGAGTTGGGCGTCGAAGA
GGTTGGAGTACCTGAGGCCAGTCACGGGGTCGATGACGCCAGCGTTGGGGCGGAACGTCG
CGTAGTTGAGGTCGATCACGTTGGGCTGAAACGTGTACGTGTAGTACGGGTAGATATTCA
CCATGAGGTAGGAGCCGGTCTGCTCCAGGAAGTCGAGCATGGGGCTCATCACTGACCGCG
CGATGTCGTCCCGGAACGCGCTCCTGGACGGCGGGAACGACACCTTGAGCGCGTCGAACG
CGATCGGGGTGGTCACCTTCACGGCGTCGCCCAGGCCCAGGGTGACCAGCGCCGCCCGCA
CGTTCCGCATGGCCGTGAGGAGCTGCGGCGTGAGCTGCGGCGCCTGCTGGAAGACCTCGT
TCCCGACGGTCACGCCGCGGATGTCCGTGGCCGGGTAGTAGGGCGCCAGGTTGATCCTCG
CCCACCGGAGCGCGTACGATGGGTCGCCGGCCGCGGAGGCCAGCATCTCGTTGGGCAGCG
CCGCCACCACCTTGATGCCGGTGTTGGCCATCGCCCGCAGCACGGCCGGGTCGGTGTCGT
AGACCCTCACCGTCGTGATGCCGTTCTTCTTCAGCAGCTGCACCACCGCCGCCGGGTCCA
TCAGGTTGTCGCCGACCCTGCCATAGCACACGCCCACCTCGCCCGCCTCTGCAATGCACA
GGAACAAAAAATAAATAAAGGCGTAGTGGTTACATGACTGCGCCGGCGCGCTGTTTCCAA
AAAATAGCTGACTTGATCTGTACGTCTCCGTGATTTATTACCTGCACTGGAGAAGAAGAT
CAGTGGTAATGAGGCGCCGAGAATGGCGAGCAGGAGGAGGCGAGTGTGCGCCATGGTTTG
TGAGGAGGGAGCAGAGGAGTCAAGCGATGGGGAACAAGCAAAATGGTGGGTGGGAATTTA
TAGCGCCTGCACTGTGCGTCCTGCGCCATGGATGGGGTAGCGCGCAGCCCAGTAAGGCCC
TGTTTGAAACCATTCAGATTATATAATCTGGTTTTTATAATTTATTGTATTTCTAAATAA
AACAGTTTATATTATAGATTTTATAAACTAGATGACCAGATTATTATAATCTCATAATCT
CCTCTACCCCAGCTAAAATGAGATTATGGATTACAAATAACGTGTTATCCTTGTAAACTT
CAAGAGAACTACGCAGTGCCACCGCCATCTTCCTATTTTTCCTTGTAAACTGAGGACAAA
CATGTCATTATACAATTTAAAAGCTAGTCTGTAGTTTATATAATCTGGTCTCTAAACATG
TCCACCTGGATTATTTTTATAAATCAGATTATATAATCTATGTTCATAATCCAGATTATT
ATAATCTATTATGATTCCAAATAGGGTCTAAGTCTAAACCAAGGGGGCCAGCTACGGAGG
TCGACCTCCTTATACCTAATCTCCTCCCCCTGAATTGCCCGGAAAGTTCTCTAATCCTTA
TCTTATACACTATTAAAGATGCATGACTACTTTCCCTTTAAGAAAATTCATGCGTGCAAG
TTGCATAAAACTTGCAGCTACTTGAAAATGTGCACAAGGCAATGCAGTTGTGTCAATTAC
GCTCCACCGCAGACACCAAGAGTCAATGATGGCACTCCAGTGGACAGTGGTAGTGGGCAC
TGGGCCCGACTAGACAGTGCTGGCCGGAACCATCGTTTTGGACGAAACACAGACCGCCCT
TCCTACGCGGCCTAATTATTCTTTTATTACAAAAAAACTTACGTCCCGCTATAAAACCAT
TATAACCACAAGTAGGAGCTCGGCGTCCATGGAGGCCGATTTTTTAAAAAAAAAATCAAA
AATCAAACTTTTTGGTGTAAAAAAATTCTGAAAAAAATATGTAAGTAAAGAAGGATGTTA
TATGTACGTGTGTAAAATTTTAAGATGAAATATCTTGAAATACGATCTACACAAAAAAGA
CAAATTCATGACCTCAAACGATGAATAGTGTCATGTGTAAAAAAGTCTCAGATTTGTTTT
TTTTTACATCCCTCATTTTAATGTATTTTTTTCCAAAAAATTACCTACATGTGTGTTAAT
CCTTCACTTATCTCTGTTTAAAAAAATAAAAATAAATGTAAGTATATGAATTTTTATGAA
ATTTGAATTTCAAATTTAAAGGCCTCCATGGAGCCCCGTCACCAAACACAATTTCCACAA
GTACAAGTATAAGTTTAAATTCAAACACACACCTTCAAAATAGCATGACATAAAGTATGT
GTGGGTTCTGCTGAGGGCACAACTCTACAAGTCCTAAAATAGAAAAAACAAAGACAAAGA
CGTCGCTAGTGAAGAAGCTAATCCGGCTAAGGTGGTGGCGAAGGAAGCGACGGCACCAAG
CGGAGGGCCATCGCCCAAAGATCAACATTGATAGAGTTGATGGCGTCCTGGTCCTCGCGA
CGACTAAGCGGCCATCAAACTGCAAGTAACCACACGTTTTGAACACCAAGTCAGTCGCAT
GTTGAAGAGGCACACGCTGAATCACAAGCTTATTTTGAATCATCTATAGCGTCTAAGCGA
GGACCCTAATAACCATGCACCTAATGCGTCGTCCCGTTGGTGTGGATGCCTGGAGCTCGG
CGCAAAGGTCTGGGAAGTTGGTGTTACACGAACGACCACCAATGGCCTCACGAAGGCAAG
TCCACAGGAACTAGGTGGAAACACACGGGAAGAAGATGTAGTTCGAGTCTTCAGGTGTCC
CACATAATGGACAATCCCATCGGCCGGGCCATGTCGGGGAGTAAGAAACTAAGAAGTCCT
CGGACGCCGGTCTATCTCCACGGGCCGGACTCATGGGCCACTTCAGACTGGCGATGACAT
ATACGAGAAAGATTTCA