Contig Data
morexGenes
Links



Map Locations of contig_89740 (3858 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_89740

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80311 4 2802 bp MLOC_80311.2 Available Available LOC_Os03g03034.2, FRAME:+3, EVALUE:2e-116, 13103.m00280 protein flavonol synthase/flavanone 3-hydroxylase, putative, expressed
MLOC_80312 1 283 bp MLOC_80312.1 Available Available None





CDS Structure of MLOC_80311






CDS Structure of MLOC_80312






Contig Sequence (3858 bp)

>contig_89740 3858 assembly3_WGSMorex_rbca.fasta
GGAGGGAGTAGAATATTAGGGGGGAAGTTCATGACGAAAAAATTCTGAATCAGATCTTTT
ACCTTTTGCAGTTTTTTCAGTGGGAGAATCTTGCCCATCTTTGCAAATGCTTTTGCCCAC
AACTCTCCTGGATTGTTGCCTGATCAGCAAGTAGAGTTGCACACACAATTACATTTTTCA
GAATTTTCTTCACATTTTTTCGCTCTAGTTCCGCCCTGTTTTACTATGATTTTTCTATGG
GAGGAGAGCTCCCCAATGCCAGGCCGTGGCCTTCGGCGACTGTTGTGGGAGAAGAAGTTG
CCCGGGGATCTGGGCTCAGGGCGGTAGGGTTTTTCTAGTGTTGTGGGATGTAGAAGGAGG
ATCACGTGAGGGGAAAGGATGGCAGTTTTCATATGGCATGTTGTGTTTGTCGGGACGTGG
CAACGAGAGAAGGATAGACATGCCTTTTTGTTAGCACATGCCAGACGTGGAGAGAGACAC
ACAGGAGCCGTGCCGTCTGGCATGGGTGTGGTCGTCTCATGCCATATGTCGGTCCGCATA
GCACGCGTGCGCTATGTTGTATCGTCCTTGTAGTTGGTAGTATGTTTTTTGGCGCTATCA
TGCTTCATCATCACACAGGCATGGGTGTTCTCCTGCTCGGTTTCGTCTGGCATATATTGG
TCAACACTCGCATGTCTATCCTCTCGTGAGTTGGTAGAACTAAGTCTGGCATGGGTGTCC
ACATGATAGAACGTATGTTGGTCGCATGTCTATCCTTATAGTTGGTAGAACGTATGATGG
CATATGTTCTCCTGCTCGGGGAAGTTGGAAGAACGAGGGTGTCCACATCCACAGCCGTCC
GTCCGATCTCTCTCTCTCTCTCCCCCCTCGTTATTCCACAGCCGTATGTTGGTCCACACT
TGTGAACACTCACGGACGGTCACTCATCCACGTGTTTTTTTGTGAACCACTTGTGAGGAA
GTCCGTCCGATCTCTCTCTCTCCTCGTTCTTCCATAAATCCTCCGACTTCCCCCGCCTGC
TCAAGCCCCGGCGTTCCTTCTTTCTCTCCGTGAACTTCCTCTGCTCACGCCCTCCACGAT
CGTGCCACCTATCCATCTCTCTCTCCCCCCGTTCTTCCGCCGGCATGGCGGAGCAGCTCA
TCTCCACGGCCGTGCTGCACACGCTGCCCCACAGCTACATCCGGTCCGAGTCCGAGTGGC
CGCGCCTCGACGCCGACATCCCCGTCGTCGACCTCGCCAACCCCGACAGCGCCGCCGTCG
TCTACCAGATCGGCGCCGCCTGCAGCTCACACGGCCTCTTCCAGGTTCCAATTCCCATTT
CGCCTAACGCTGCTCTGTTTTTGCCGGAAATGGCGTTGCTCTGCTTTCGCTCACAGTGCG
TGCTCGCGTGGTGTGTGTGTGTGGTTTCTGATCGTCAGGTGCTCAACCACGGGCTGCCGG
TGGAGGCGATGCGGGCGGCCATGGCGCTGGCGCACGACTTCTTCCGCCTCTCGCCGGAGG
AGAAGGCCAAGCTCTACTCCGACGACCCGGCCAAGAAGATGCGGCTATCCACCAGCTTCA
ACGTGCGCAAGGAGACCGTCCACAACTGGCGCGACTACCTGCGGCTGCACTGCCACCCGC
TCGAGCAGTTCGTGCCGGCGGAGGGGCCAGCCAATCCGCCGCCCTTGAGGTATTTATTAC
TCTTTCTTCATCACTTCCAGAAAACCGCAAATATAACTACTCACTCCGTTCACTTTTATA
AGTCACTCAAATAACTACTTCCTCCGTTCAGTTTTATAAGTCATTTAGACAACTGAAATT
AAACTGTTTTGCACCACTGACGTAGCTAGAAATAAAATAAAAGGTGCGCACACTTTTAAA
AAGTTAGGTCTATTTCAATTGATTTGGATGGGTCTTTAAAATCTGCTAGTTTTTACATGG
TAAAAAAAATGCTTCCTAAACTTCTGGGGCATACCCCCTAGATACGCCACTGTTTTGCAT
TATGTGTGAAATGCCTACAAGGCCTTAGAAAATGAACGCTTTCTTTGTACCTAAATATTT
GTAGTTTTAGCAGGCTAAGTTAGTCTATTAATACTATAAATATTTTGGTATCGAGAAAGT
AGTATTTGCTGGATCTTCGAAAAGAAAAATGGGGCACCCTAATGAAATTTGGGTTTCTCA
TTCGTTAGATTAGTAATAACTATGTTGCATCTAGATGTGTCTTAGACATATCCATCGGTT
TTGCTAAAACACATCTAGATGTGAGATAAGTATTGCACATCTAAGTTTTATATCATTGAT
CTTATGTAGAGATTTGTGTGTATTTTTTTTATGCTTGATTTAATTATTTAGATGTGTAAT
AATTATGTCACATCTAGATGTGTCCTAGACACATCCTTATGCTGTAAAAATGCTTTGAAA
GTACTTTTCCTTGATTACTTTGGCATTATTTCGTACCGGTCCTAACTGTTTTAGCTACCA
TCTTTTGTCACTGATATGCCAAAAACACCACTAATTTCTTTAGCATTTCCCTCCTAGATT
CAACCGTAAACAGACAAACAAACACACACTTTTTCTCATGATTCACGAGACTGAGCAAGT
TATCAAACAAACTCACCTGGAACAACCACGGATGTACTATATACGTATCAAACTAAGAGC
ATCTACAACCGGACATATATATGGTTAACCAGCTGCCGTGTGTTTGCATGAACCAGGAAT
GCCATGGGCACATACTGCAAAGAGGTCCGGGACCTCGGGTTCCAGTTCTACGGAGCGATA
TCGAAGAGCCTGGGGCTGGAGCAGGACTACATCAATAAGGTCCTCGGCGAGCAGGAGCAG
CACATGGCGGCCAACTTCGACCCCAAGTGCCCGTCGCCAGAGCTGACCTACAACGCCCTC
ACCATCCTGATGATGGATGAGCAGGTCACCGGGCTGCGGGTGCTCAAGGAAGGTCGTTGG
ATCGCCGTCAACCTGCGGCCCAACACGTTCATCATCAACCTCGGCAGGGCAGCAGGCGAC
ACAACAGCTGCCGGTGCGGAAGCAGGCGGCGGGGCAGTATGTGGCAGGGAAGGAGTCGAT
GCGGCAACACGCGGCGGGGCAGTATGTGGCACAGAAGGAGTCGGTGCGGCAACACGTGGT
GGGGCAGTATGTGGCACAGAAGGAGTCGGTGCGGAAGCAGGAGGCACACCAGCAATCGGC
TCGAAAGAAGGCGGCGCGGCTAAGGTCTCCGCCGCAGCGAGGATGATGAACGCGTTGGCC
AATGTGACCAGCGCGATCGTCAGCATCGTCCAATGCGCCAACGCCGATGTCAACGACTGA
AGAATAGGGTTTGGCTAGCTCTGTCCAAAAGAGGCAAGGTAGTGTATGCTTTTGGCCTTT
TCGATTGAAGGACCCCTTTGCAGGTCATTTACAACCGGCGGAGTCCAGAGAGTGTATTGG
TATTGTATGCCACCGACCGGGGACGACAACATGACCTATCTTTAACCGGGTTAGATGACT
ACAAATTAATACGTTAAGTATTTAGTCATCATATATAGCTTCCCTGTTGATGGTTCAAAA
GAACAAGGACTATAGGTAGCCTAGCCGAGTGGAAATGGGTCGTTGCTGTTAAGATTCTCT
AGTCATGAATAGAATGATGTGTGATGATGCTTGATTTTCTTTAAGAAAGAAAGGAGGGTT
ACCTCCGGGGCACCACTAGGGATCAGACTACTGATCCCTAGCAGTATATCAGACCACTGG
ACAGCCATTAGATCGATTGCACTTGCAAGGCGTGATTATGTGCCCAACGTATGACCCACT
TCTCCTCTAGTTAGTTTCCACATTATACTCCTGTGATTACGTTGCTACAATACTATTTTC
TTCCTTGAATTAATTTCT