Contig Data
morexGenes
Links



Map Locations of contig_89507 (4129 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_89507

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80253 2 928 bp MLOC_80253.1 Available Available LOC_Os06g45340.1, FRAME:+2, EVALUE:6e-70, 13106.m04772 protein peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed





CDS Structure of MLOC_80253






Contig Sequence (4129 bp)

>contig_89507 4129 assembly3_WGSMorex_rbca.fasta
TTTTCTTTTTAGCAAACGTTATCCCAAATCCACTTATGTAGGGATTGCGGGTTCAAATAT
CAGAAATAGCAGGGACGTTTTTGCAAAAACACCTCGACGGGTTTTCCGACAGAAGCGATA
GCCGCTTTATTATTAGGTAAAGATACACTTTTCAGCATGATTGTATCATCTCGATGCAAT
GATTTGGAGCGAGTTTAATAAAAGTTTTTACCGGTGAACCATAGAAATAAACAAGTTCTG
TATATTGATCTGAGGATTCACGGTCTTTGCTGGCTCCACATATATATATATGTCCATCGA
TGGACGAATCCTCTAGACCTCTACGACCGACTGATGACATATGCAAGTCCAGATGAAGGA
TACATAGATGGATAGGTCGATCAGGAGGATGCCCTGCCGACGTACTCGACGTCGAAGAGG
AGCGTGGAGTTGGGCGGGATGACGCAGGACGTGGGCTCCCACCCCCTGCACCCGGCCCCC
TTCTCCCCGTAGGCCAGCTCCGGCGGCAGCCTCAGGCTCCGCTTCCCACCTGAAAAACAC
ACCAGAGCACCGACTCACACCGGGGAATTCAGTTCAGAGCAGAACGACGTGAGCTCGGCT
GACGCGTCGCGTACCGACTCTCATCGGCGGGATCCCTTCGCCGCCGGCGATGCACAGGTC
CCACCCCTTGATCACCTCCCCCACGCCCACCATGATGGTCAGCGGCCTCCCGCGGCCGTA
GCTGCTGTCGAACACCGTGCCGTCCTCCAGCATCCCCCGGTAGTGCGCCTGCAGTGCCAC
GGCCAAACCGCGAAGCCGGTCAGCGTGCAGCCCGCGACCACTATCGGAACTACGCTAAGC
CTACGCTTGCATCAAGAACTTAGTTAGTTATACTGTGACGGAGGTCGGAGGCGAATTCGA
CTGACCTTGATGAGCTGGCCCTTGACGGCCTCGGCGCCGGTGCCGACGACGCGGTCGCAG
AAGGCGAGGCCGGAGGGGGTAGCCTCGAGCGCGCACTCGTCTGAGGCGGCCGCTGCGGGG
ACGACGCGTGAGATGAGAGCGGCGGACAGGACGGCTGCCGCGGCCTCGCGCCGGCGGAGG
ACGAGGCTCTTGCTGCTGGCGCCAGCGCCGGAGTCCGCGCTCGGGGCCTGGGCGCAGAGG
GGCGGCTGGGGGGTGGGCTTGGGGAGGCTGAGCAGGAGGCGGGAGAGCGGGGAGGTGGAA
GTGGCGGGAGCCATGGCTGCTGTGGCTCCTTGCCTCCTCTCGGTCACGGCAGCTCACTCG
AACCAGAAGGCTCCGCGTCACTAATGGATAAGGAGGGTCACGTGTTTCTCAACTCCGCTC
TGCCGTGTGATTTTCGGACGATGCGCATCTGGGCCGTCCGTTCTGGATCCAGCGGTCGGG
AATCCTATCCTATATATCTAATACACTATGCTCTCTAATTTTCAACGGATTTGCTTGAAC
TCAGCTAGCTGAGTTTTATCTATGGTCTCATTCACGTCAACAACCGTTCGATAGGGGAGC
AAGCCAAGATTCATGCTTTTGTAGAGATACGTAGGGAGCAGGTTGTTATCTTTTTTTTTT
TAGGGGTAAATGCTTTGCTTTATTGATCAACAATGCGGATTTCAGGAATTACATGTAAAT
TAAAGGGTTGTAGGAGCCACATATGGGGTCCTTCCCCCAAGTGTAAAGCATGCTTAGCTA
AGAGATGAGCTTCCCTATTAGATACTCTCCCTTCATGAACAAAAAAGATATGTTGAAAGT
TTGAAATGCCATCATTTACTTCTTGAACTATATGGCCTGTAATCCCCTGTGTGCCCGAGT
TGATCTCCCGTACTGCTGTAAGACAGTCCGAGGCCACGACGATATGTTGTAGGAGAAGAT
CTTGTGCTAGAGCCTGTGCTTCCCGGCATGCCAATGTTTCCAATGTGTGAGGGTCGGTAA
GTCCATGAAATACCACTGCCGAGGCACCCAGGTACTTGTCGTGGTCGTCGTGACAAACTG
CGCTCACCGCACCAATAGGGGGAGTTTTGTAGACTGCCCCATCGACGTTAATCTTGGCAA
AACCCGCCGGTGGTGGTCTCCAACCTGCTGCTGCTGTCTGTGTCATTTCCGCATGTGATA
ATGGCCTCTCCGGTCTTGTCCCCTTCAGCTCCTGGATGAACCTTGTGACAAAAGAAAAGG
TTGCCGCAGGACTCTGGTGTTCTCCCTCATGGATGAGCTTTCTCCGTGCATACCATATAG
CCCACAAAGTGACTGTCATGCGGGTTAGTTCGTCCTGAGAGACAGATGCAAACATGCTGA
ATAGCCAGGAGCGTGCAGATGGCTCGGTAGTAGCCAGCATATGTTCAACCAGTTGTTGAT
CATGTAATTCCCATACACAGCGAGCCATCGTACATGTAACCAGCGAATGGAACCAAGAAT
CTGCGGCGCCACATACAGCACAGGACGGTGTCGATGCCATGTGCCGGTGGTGGCACACAT
CTGCTGTAGGGAGGGAAGAACATGCAAGTCTCCACAGAAACACCTTTATCTTCGACGGTA
CTGCTATGTGCCATAGTTTGTCCCAACACTTCCTCTCCCTAGTAGTGTCGGCAGGACCTC
CGCGTCCTTCGAGCCATGCTTCTCTTCGCAATTTCGTCGTAATGAGCATGTGGTAACACG
AGCGAACAGTGAACTGGCCATTCTTTTCTTGTGACCAAGCCCAATAGTCCGAGCTTTGTC
TGGTAGGAAGTGGTATATTTAAGATCACCTCCGCATCAATGGGAAGAAAAGTTGCGCTTA
TCACCTCATGTTTCCACTTAGCAGCCGTGTTATCAATTAACTCGGACACCATCAGAGGTC
TGTGGGTTGCCATACATGTTATTGGACGCATCGACGCCTCCTTAGGCAACCAGTTCTGGT
TCCATATGTTAGTTTCTGTGCCATCTCCAATTCGCCTGATCAAACCAACCGTGAGGGCTT
CCCTCCCTTCCATAATTGCCCGCCAGATCTGTGAAGGGTTGTTTCCCAGTGCTGCCTCCA
AAATTCCAGTGGAAGGAAAATACCGAGCTTTAAGGATCTTTGCACTGAGTGTGTTCGGAG
AAGTAAGAAGCCGCCATGCTTGTCTTGCCAGGAGAGCGATATTAAAGAGTTCTATATCCC
TAAACCCGAGTTCACCTCCATACTTTGAGCGAGTCATTACTTCCCAAGATACCCAGCAGG
TTTTCCTCTCTCCATTCTTACTTCCCCACCAGAACTTACGGATCACCGAATTGATATGTA
GACAAAGACCCCTCGGTAGTTTGAAACATGCCATCGAAAAAACAGGGATTGCTTGTGCAA
TAGATTTAATGAGTACCTCCTTCCGTGCAGATGATAACATCTTCTCCATCCACGCTCGGA
GCTGATATTTCTTTTTTTGCTCGATGCACGCTTGGCTGTTGGGCCTGTTTGTATCAGGGG
CGGAGAGCTGGTTGTGTTATGCCTTTGTCGTTGCTTGGTGGTGGAAATGGTAGCTATCTT
GACTGGACGAGTCTTGTTTCACATTAGTACACTCTCTATAACACGAGAGATTCAAGGCAA
GTATGTGAGCTTTTTTCTCCTATTCCTCACCCACTCACTCAAATCTGATTTTAACTTTTT
ACTCACCACTCTCTAGTATCTGAATGTATTATTTTTTATTAAACTTTTTTCCTTGTTTCA
TTTTTTTCTAAACTTTATTTTCTTGGTTTTGTTAAAACTCACCTAATTGAGTTTTAACAA
CGGTTTGGTTACTTTTCTAGCCCTCCTATCATCACATTAAGATTTGTGATGGCTTTTGAA
TGATCGATGTGTTGTTCATCTATACGAGGGGCAATCCATGTCCGTTACAATTACATGTTT
TTAAGGCGGGGTTGTAACTGCATATTATTTAAGAGGGGCCGCAACTTCATGTTTTTAAGA
GGGCTCGCAGTTGCATGATGTGATCCCGTTATCAAGTNNNNNNNNNNNNNTATGGCCAGG
AAATCTTGACCATCTTCGATCAACGAGCTAGTCAACTAGAGGCTCAGTAGGAACAGCGTG
TTGTCTATATGTATCCACACATGTATTTNNNNNNNNNNNNNATACAATTCTAGCATGGAT
AATAAGTGATTATCATGAACAACGAAACATAATAATAACCAATTTATTA