morexGenes - Barley RNA-seq Database

Contig contig_89166

Source Contig contig_89166

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_89166 (1621 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_89166

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_80186	3	1485 bp	MLOC_80186.1	Available	Available	None

CDS Structure of MLOC_80186

Contig Sequence (1621 bp)

>contig_89166 1621 assembly3_WGSMorex_rbca.fasta
GGGGGCGGCCGCTCCGGGCCCCCAAGATCCAGGGGGGGCCCTCTCAGGTATGCAAGTAGC
CGAGGGATTCTCTCGGGAAAAAAAAGAAATGACTTTTATTTTTTGAGCAAAAAAAGCGAC
CGAGAATGGGTCGTAGCATGGCTTCAGGTGTACAGCTTCATATGGCCCAACTAGATTGCT
GGGCTAGGTAAGGTAACCATGCATATACGCACGATTTCCAAGAAACAAAAAACACACGCA
GCATGGTTGATCTAGTAGAGTAGATCAAATCAGATCGAGGAGGGCCATGTATCATGCACA
ATGCTCGCGATCGAGGCAACGAAATTTGTTTTAGGCCGAGTGCCCTTGCCATCACTTGAT
CGATGTCTGGTCTCGCGCTCTCGCCTTGCCTTATCACCTTCATTCATACGCAGCGGCAGC
TAGGAGCAAGGGACAATAGCGGTCAAGGCCTGCTTAGATTGGATCAGAATCAATCAGTTG
AATTTTAAATCCATGTTCTATAGCTCGAAAAGGTAGCTACTCTGGTAGTCCCTAGTTACT
AAATTTGTTGTTTGTTAATTGAAGTTGATGCCCAGAATTGTTTTTGATAATCCAATCATT
GGATAGGATTAGTGTGTTGAAAACTGCACTATTTGTGCTTAATTTCAAGATGACACATAA
ATTTACATTGTAATTGTTGTGGATTGCATTCCAATCGAACCCGGTTTTCTTAGTTTGGAT
TCATGGTAGCTGAGGTATCACCAGAATGGTGTTGTTGTACAAATATTTTTGAAGTTAAGA
AGATATTGTTTTTGTGACTTTTAGAAGATTTCTATTTCACAAGAACTAGCCTATTTTCAG
GCATGCCCAATTTCTTATTACAACATGAAAGATGTAGATAACTTCATGTTGAATAACCTT
ATTAGCTTATTTTTCTTCATTTTGCAAAATGGATCACGATGTGTAGCGTAGAAATTCCTA
TATGATGTTCTGTCGAGTTCAAATTAAAGAGAGAATCCAAGCTATGCTTGAATATTTACC
CAATAATAAGTAATGGGCTAGCTGTAGAAGATATTTACACATAATTAAGTTCAAATTAAA
GAGAGAATTCAAGAACCAAGGACAATACATAATTTATTTTTATGTTTGTACTAAAGGGCC
CCGGGTTTACTTTGGCCCCGGGCCCCCAAATTGTTAGGATCGGTCCTGCTACACGCCTGT
AAAATGGCTATTAAATCAAGGATTGAGACAAACAACCAGGTTCATAAGTGCATTCCCTTA
CCTCCTTGTCTGAAAGATACATCAGTAGCCAGTTTGAAAATATGAGATCAATCGAGTTGT
CCTCAATCACCAGGTATGGAGATCTAACATCAGTACACATGAAGGTTGCATTTTCGTAAT
GGCCATTTATGCTTTCATTCTACAATGAAAATATATTGAAAAGAGCTCAGTGAACCAGAC
ATTTCATGCATGTGGCGATTAAAAGAATGCCATCGCATTTCAGGCACCCAATATGTTTTC
TTAAATTAGGAGTAATTAAATGATGATACCTTTTTAATCACACACTCAATGAAATCCATT
GCAAGAACATGCCCAGGTGTCGTAGCCAGTTCTCTAGTAAAGCGACCTATTCCCGCACCA
A