| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_8900
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_80158 |
1 |
1645 bp |
MLOC_80158.1 |
Available |
Available |
LOC_Os12g22030.1, FRAME:+3, EVALUE:0.0, 13112.m02237 protein serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed |
CDS Structure of MLOC_80158
Contig Sequence (5293 bp)
>contig_8900 5293 assembly3_WGSMorex_rbca.fasta
CCGCCGACGCCGCAATGGACTCCGTCGCGTCGTGGGGGCTGACGCCGCTGGCGGACGCGG
ACCCGGACGTCTTCGACCTCATCGAGCGGGAGAAGCGGCGCCAGCGGAGCGGGATCGAGC
TCATCGCGTCGGAGAACTTCACCTCCTTCGCCGTCATCGAGGCGCTCGGCTCGGCCCTCA
CCAACAAGTACTCCGAGGGCATGCCGGGGGCCCGCTACTACGGCGGCAACGACGTCATCG
ACGAGATCGAGAACCTCTGCCGCGACCGCGCCCTCGCCGCCTTCCGCCTCGACGCCGCCT
CCTGGGGCGTCAACGTGCAGCCCTACTCCGGCTCGCCCGCCAACTTCGCCGCCTACACCG
CGCTCCTCAACCCGCACGACCGGATCATGGGGCTCGACCTCCCCTCCGGCGGACACCTCA
CCCACGGCTACTACACCGCCGGGGGGAAGAAGATCTCGGCCACCTCCATCTACTTCGAGA
GCCTGCCCTACAAGGTCAGCGCCGCCAACGGCTACATCGACTACGACAAGCTCGAGGAGA
AGGCCATGGACTTCCGCCCCAAGCTCATCATCTGCGGTGGCAGCGCCTACCCCAGGGACT
GGGACTACGCCAAGCTCAGGGCCATCGCCGACAAGATCGGGGCCATGCTCCTCTGCGACA
TGGCGCACATCAGCGGGCTGGTCGCCGCGCAGGTATAATCACCACAAACTCACCTCAACT
AGTAGTTACATTCAGAAATTGGATCTTAACTTCAAAATTACTTTTTCATGTGATGCGATC
TGGTTGTTGGGATCTTAAGTATTAGCCTATTAGGTGCATACAGGACCTGGTTGCTGAGTT
TTCTACGTAGTTGTATATTATTGTCTTTTAGCTGTATGCATCTGTTAGATCTGTGCATGT
TTCACGGAGTGGTTGGTGGTTTGGTGCCGGGTTGTTCTCAACTGGAAAATACTCTGCTTA
CCGGGAATGTTGCTAGTAGATCCTATCCGACTAACTGAATAGCAATTTGGTATCCGTTTG
CATAAATGTGTAATAGTTTCTTAAAATGTTGTGTAGTAATTTCAGACAATCCAAGATTGA
AGAAGTAACAACATTTTTTTATTCCTGATATAACATGCAACCTAGAATGTTGCTAATAGT
TCATATCTACAACTGAGTAGCACTTTGGTATTTGTTGCATAAATATGTAATAATTTCTTG
AAAACTTTTGTAGTAATTTCAGACAAATAGAAGATTGAAAATCAACAAAAAATGTTTATT
TCTGACAGAACATGCAACAGTCTAGAGTTCAGACTGAAGTGAAATTGTTTGTTATAATAA
AAGCTTCATTAATAGAATTTGAAATAAATGTTTTAAATCAGCTAAAACTAAACACCGATC
AACTATAGTAATAGATTTTCTGTGCACATACATGACAACAAGTAAAGTTATTTGTTTGAT
AAAAGCTTCATTGATCGATTTTGCAATAGATGTTTCAAAACAGCTAAAACTGAACACCAT
TCAACTATAGTAGAAGATTTTCTGTGCACATACACAACAAGTGTATTATTGTCGATATGA
ATTATTAAGTAGGCACCAATTAACGTATAGAATGCCAGCTCTTATAATATCTTTTCATCA
TACTACATAGAACAGGTTCTGAGTCCTGATTTTACATATGGCCCAGTCTAAATATAATGT
GCCACTTGACTCAGATAACTGATGTGCATATTCCTTCTGTATGTTACTTAGTCAGAGAAA
AACTACATGTGTTACTTTATTTTCCTGAAGTTCGTCTGAACTGTGCTTTCCTGTAAGAAA
AGCACAATACTTATATCAAGTATAGTCTTGAAAAATACATGTAATGTACTAATGTTGATG
TAATCTTATGGTATCTGAGATGCTTACTGTTTCCTTTCTTTCATCTAGGAAGCTGCAAAT
CCTTTTGAGTTCTGTGATGTGGTTACCACCACAACACACAAGTCCCTCCGAGGACCAAGG
GCTGGCATGATCTTCTACAGGAAAGGCCCTAAGCCTGCGAAGAAGGGCCAGCCTGAGGGT
GCTGTGTATGACTACGAGGACAAGATCAACTTTGCGGTGTTCCCATCGCTCCAGGGTGGT
CCTCACAACCACCAAATTGCTGCCCTTGCAGTTGCCCTGAAGCAAACTTTGACACCTGGA
TTCAAGGCCTACGCAAAGCAGGTCAAGGCCAACGCTGTTGCCGTTGGAAAGTATCTCATG
AGCAAGGGCTACAAGATGGTGACCGATGGAACTGACAACCACCTTGTTCTATGGGATCTC
CGCCCTCTTGGCTTGACTGGTACGCCAGTTTATTTGTGCAGAGTTGATTTTCTGGCTGTC
CTATCATCACTTGTTCTAATATTGGCTTATGTCTGTAGGAAACAAGGTCGAAAAGATGTG
TGACCTTTGTAGCATTACATTGAACAAGAATGCTGTCTTCGGTGACAGCAGTGCATTGTC
CCCGGGTGGTGTCCGCATTGGTAAGAATCACTCAATCTGCTTTTCTGTTTTAATTACATC
TGCTGGTACTGCAAGCCTGAAGAAATTATTACTACCTCCATCCGAAATAGATGAGTTTCT
AGAATGCGTGTAGTCAAACTTTTCATTCATTAGATTGGTTATTAGAAATATTTCCATATT
TGCAATTTATAATTAATGGGCGGAGGCTACTTTATTCATGTTGCATACATTTCAATGTGA
GCAATCAGGGTCATTCTTGACTTGTTATTTACTGCTGTTGACCTGATAATTTTTCTCTGA
AATAAAAAAGCCCTCAGTACAAACTATATTGCCCGGGCACTATATTTGGGAACTGGGAAT
GACCTTTTTGATCCCTTAATATAAAGTAACTCTGAGAGAGAGAATCTTCAATAAGTTGAG
AGATTTGCCTGTGATGGGATACCAGGTACCTGATCTACAAGCCCTGTTATGCATGTTGAC
ATAGCTGAGAGGCTTTACATGATGACTGCGAACAATTTCATAGTTAGGGATCATGTTTTA
GTTCCTACTTCTTTCGTGCCACATTAACTGCAGAAATGTCGTCTGAGTAAATTCTGGCTA
TTGTTTTCAGGTGCTCCTGCTATGACCTCCAGGGGTCTGGTTGAGAAGGACTTCGAGCAG
ATCGCCGAGTTCCTCCACCAGGCAGTGACCATCTGCCTGAACATCCAGAAGGAGCACGGG
AAGCTGCTCAAGGACTTCTCCAAGGGCCTGGTGAACAACAAGGACATTGAGAACCTCAAG
GTCGAGGTCGAGAAGTTTGCCCTCTCCTTTGACATGCCCGGCTTCACGCTCGAGAGCATG
AAGTACAAGGAGTAGGATGATGATACATATGCCATGGTTGTCTCGCTTCTAAGCCTTGTT
GGCCGCGGCGCAATGCCCACCGTGCTGTGCTTCTATGAGATTTATTGGCTCGCCCTGGAG
CCCTGGATAGTTTTGTAAACGCCTCCCACCTCTTGTGCTCTGTTTGCCGTCCACATCCCC
ATCATATTTCTTTGTAGGAATTGTTCGCGTGGGATCATGGAATGTCGAGTATTTGCCAAT
AATCTTCCATATTATTTTTGTGTACGCAATGCACATGGGAAAAAAATCTGTGTTGTTTTC
CGTTTTGAGAGAGGTCTGATCAATCAACTCGACGTTACACTCACGTGTTGGCTAGATTTA
TGTACGTGGTTTTAGTTTACTTTTGTTAAACTATACTTGTTCAGATATCAACGCAGGATA
ATGCCACCGATATAGTGTCTAGAGAAAGAAGGCGTATTCAGATATCACCGCAGGATAATA
CCACCGATAGTCTCATAGTGTCTGACAAAGAAGAAACCACAGTTCTCCATCGATACTGTG
CGGGGCGGGTTTGGCTAGGACTAAAGCCCTTGCCGTCGCCGTCAAGGAAGCCCACCATCC
GACATCTTTTTTGGCGACTCTCCTCGGGGGGAGGGATCGTTGGATCCCATTTGTGCAGAT
TTGTTTTTTCTTTAGATTTAGACCCTGGTAGCTTAGGGTTCTTGGATCGTCTGACGTCTT
GGCTTCGACGATGATGGCGATGCTAGAGCTCCAGATTCTTCACCGACAAGGCGATCATAT
CTATGGTCGGTGATGGATTTAGAAATCAGTCTATTCAAGCGGGGATATCGTAGCGGCGAT
AGCATCCTTGTGGTGGACTTGTGTCCTCGGGTTCCACCATTGCGACGACGTCTGCTCCAG
CGTCGACGCAGAGCTTGAGAGGTAGTCCAGGAACGGATGCAGATTGTGGTATGCATTAAC
AACATCTGGAAGACGAAACATGTGTTGGGTTCGTGGTTGATGGTGGCAGGTATGGTTTCT
TCCTTCGGCGTCTTAGTCGTGGTGGGATGTCAGACCTGGAGTTTGATGGCGCGTCCCGGG
TGTTGCCCCGGTCTGATTCGTTCAACAGTAATGGTTTCATCTTTGGTGAGCCAACTTGGA
GATCCGCAAAGGTACATATCAACGATGGAGCCATGTCGAGCTCGGATGAGGAGGTAATCC
GTCATTATTTTTTTGGTGGCTGCTGTGGTGGTACCGGAGGCAGGTGATGGACGTTGGTGT
CAAGTTCAACGATGTTTTGATATATTTTCAATTTTGTCGTGTCAACATGCCTTGTAATTT
GACCTTTATGATATAAATGAGAGACGTATTACCATGTAAAAAAAAGAAAAGACTGTTTCG
ATAGTAAAATGTGATATTTTCGAATGTCCATGTTCATCTGCATCCGGTCAAGAAAAAAAA
TCATAAAATATATACAATAAATTTTAAAAAACATTTTTTCATGGTAGATAATTTGATAGG
CGGGGTGCATTTAAATTATACTCCTTCCGTCTCAAATTAAGTGTCGCAAATTTATAACTA
AACTAGTACAATATTTATACTAAGTCACCGACACTTATTCTGGGACGGAGGAGTAGATCA
TTTGAACATATGAGTAGCTCTTAACAAACAAATAAAAATTGAATAAAAACAGAAAATGAA
CAATATTTTTTACATACCTCAAATTTATCTTTTTGCGGAGAGATACTCAGATTTTTAAAT
GATTTGAAATTTAAAACACACCTCATGCATCAAATTATCTATCATGAAAAAAGGTTTTTA
TTATTTGTTAAAAAAAATCAACGCGGGTGTAGATGAGCCTAAACACTGAATCACTGCTAT
TTGAATATTTGTGTTTCTTTGGCACATTCTCGTTCTTACAACATCTCCAGCCGTTCGGCC
CCTCACGGGCTTGAAATAGCACCGTCTTGGGGCGTGCCGCCAAAAAAATCGATTGGCGGG
GGGGGGGGGGGGG
