Contig Data
morexGenes
Links



Map Locations of contig_88783 (6504 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_88783

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80126 1 394 bp None Available Available None
MLOC_80125 1 2018 bp MLOC_80125.1 Available Available LOC_Os12g39300.1, FRAME:+1, EVALUE:0.0, 13112.m04065 protein cytochrome P450, putative, expressed





CDS Structure of MLOC_80126






CDS Structure of MLOC_80125






Contig Sequence (6504 bp)

>contig_88783 6504 assembly3_WGSMorex_rbca.fasta
GCGATTTCTAAAAATTATCCGTCACCTAGCCAGCCGTTGGATGCCCGAGCTAACAGTCGT
TTGATCTAACACCAGCATCCCGCCGCATGGTCAGTCGTTATTTCCTGCAACAACCAGTCT
ATTGCGGAAACTAGACACTCTTCCTTGGTCCCTATAGAGCTGCGCCCCGCGTGAAGCCGT
CGCCAGCCCGTCGTAAAATCAGCCCGCCGCCCACGTGCGGGAGCTAAACTACCGTCTTCG
AGCAGATGGCATCGAGAAGCCTAGGTTAATTTCTAAAACATCATCTCCGTCGTGGAAATA
ATAGCCATGTTGTAGAAACAATTTCTGAAACAACAGTCGCGTTGCAGAAATAACTCCTGA
AACAGACAGTCAGTGGATCGCCGTCAGATCTCGCAATCTATCGGTCGCCTGTGGTCCTTT
ATTTTTGCAACAAAGATCATGTTGCAGAAACATTTTGTAACATAGATCTTGGTAAAAAAA
ATACAACACAGATAATGTTACAAAAAAAATCGCAGCAAAGATCATGTTGTCGAAAGAGGA
GCAGAGAACCAAGCGGTGGAGGAAAGCAAATTGTCCGAGCGAGAATAGAGTGGAGCGAGA
CGAGCCCCCGAAACATCCCTACTGTTATCCAGTATCAAGAATACCTGCCCTGAAACAACA
TGCCAGTTGCAGGAAACGAAAACGGCTTTGGGAGAGGATGTTGTGCAATTGTCTAATCAA
ATCGAACGGCTACGGAGATGGGGGACAGCCGCGCACGATTGGCCGGTGAAAGATAATCCT
TTCCCATGTAATAATGGCACACCAGTGACGTACATCTTGCATCAATTTTTTTTAGAGCAA
GCCTTCCGTCCTCTGGTCGGAGGCAAACTCCAGCAATTCGATCCTATCCTTAAATTTGAC
CTTGGCAGTTCATCCAATCCTCACATTTGACCTTAGCGGTTCATCCAGTCCAATCAGGCA
TTTTCCTAAAGAAAAAAAAGTGGAAGATGAATCCTAGAAGCAACGCCGAAAACGAGATCC
TACGGCATCTCCGAGGAAAATAAAATAAAAGGATAAGAGATTCTACAGCGCATTACACCC
GAGAAAGAGACCTTGTAGTCTTGCAAATACCCAGCCAGCCATGAAATAAGTGGAGCAGCA
GCAATGGCTGGTTGGTCCACACGCATGCGGATTGTGGAGACGATTCCCTTCCCTTTCCGT
GGAAAGGTGTCTATAAGTCTCCTGATTCCATAGCAAGCATGCAGCTCTACTACAAGTCTA
CAACGTGGAAAGGTGTCTCGGACTGGTGGTACACGAGCCATGGACGCCGCCACGGAGGGA
ACGGCCAGCGGCGGGCTCTTCCTGCTCCTGCTCCTCCTCGTCGCCGGTGTCGTCGCCGTC
TTTGTTCGGCTGAGGCGGAGGCGGGGTGACGGGAGCAGCAGCGCGCCCAGCCCGCCGTCG
CTCCCGCTGCTCGGCCACCTGCACCTGCTCAAGAAGCCGCTGCACCGCTCGCTGGCCGCG
CTCGCCGGGCCGGCGCCGCTCCTGTCGCTGCGGCTGGGCGCGCGAAGGGCGCTGGTCGTG
TCCACGCACGCGGCGGCCGAGGAGTGCTTCACCGCGCGCGATGCCGCGCTGGCAGGCCGG
CCGCGGATGCTCGCCGGGGAGCTCCTTGGCTACGGGCGCACCACCATCGTCTGGGCCTCC
CACGGGGCTCACTGGCGCGGCCTGCGCCGGTTCCTTGCCGTCGAGCTCTTCTCGGCTTCC
CGCGTCGCCGCCATCGCCACCGACCGCCACGCCGAGGTCGCGTCCCTCGTCCAGAACCTG
GTACTCGACGCCAGAACCGCGGGTGGGGGTGGGACTGTTACCCTACGGCCCCGGCTCTTC
GAGCTGGTGCTTAACGTGATGATGCGCGCGCTCACCGCGCGCCGGCATGCCGGCGGCGTG
GGCAGGATCCAGGAGATCATCGAGGAGTCGTTTGCCGTGACCGGCACTCCCAGCTTCGGG
GACTTCTTCCCGGCGCTTCGCTGGGTCGACCGTCTCCGCGGCGTCGAGGCGGCGCTTGCA
AGCCTGCAGGCAAGGCGTGACGCGTTCGTCACTGCCCTCATCGATGACCAACGCCGGATG
CGCGACGCAGGTGGCCGAGAAGACATGGACAAGAAGGGCGTAATCGACGTGCTCCTGGAG
CACCAACAAACCGATCCCGAATATTACAGCGACACCGTCGTCAAAGGCATCGTCTTGGTG
AGTAGCTACCATATTTTGCAAACTGCATGCGTGCCCTTTTGGCAATCTGTGACAGCAACA
TGGTTGCCATGTCCATGCTGACTGACATTCAGGTACTGCTCACCGCCGGCACCGACACAT
CGGCGCTGACCACCGAGTGGGCGATGGCGCTGCTAATGACGCGCCCGGCGGCGATGGCTA
AGGCGAGGGCCGAGATAGACGCCGTTGTTGGCATGGGCCGACTGGTCGATGAGTCGGACC
TAGCCAACCTGCCTTACCTGCAGTGTGTCGTCAAGGAGACCCTTCGGCTCCAACCCGTCG
CCCCGATCATCCCGGCACACGAGGCCATGGAGGACTGCGCGGTGGGTGGCTTCCGTGTCC
AGCGTGGCACAATGATCCTCGTGAACGCATGGGCGATCCACCGGGACGCCAATGTCTGGG
ACGCGCCGGAGGAGTTCATGCCGGAGCGGTTCATGGACAAAGACACGGTCACCACGCCCA
TGCTGCCGTTCGGGCTTGGCCGGAGGCGATGCCCCGGGGAGGGCCTGGCGATGCGCCTTG
TTGGCTTGACTCTGGCAACGCTCGTGCAGTGCTTTGAGTGGGACGTTGGTCAAGGCGACA
CCATCGACATGGCCGAAGGTGCTGGCCTGTCAATGCCAATGGCGACGCCGTTGGCGGCTG
TCTGTCGGCCCCGGGAGTTTGTCCAGAGTGTGCTCTCTGCTTCCACATGAGGGACGGCAC
ACAGGTGTCTAAAGGAAAAGGAACGAAAATCTGGACTATAATTGTTTAGCAGTGGTGCAG
TGGTGCTGAATATTAGAGGTCTCATCCTCTTCTATGCTCATGCTTGGTAGCAAGGTCGTG
GCGTTAGTAACAGCGCACTTGTGGATTTTTTTTATGATATGATTTCTGTTGTTTGGTTTT
TTTTTTTGTTGCTCTGTTTTGCACGAGGGTTTCTCTCTACCTTATATTGTTTGGTTATGT
AATACTGTTTATACAGCGATATGAAACCTACTTTCAGAAAGTAATGCAGAAGTTTATATT
CTCTCCGTTCTTAAATATAATTCTTTTAGAGATTACACTACGAGAATGACGTTTTGGCTC
TCGGCCTTTATGAAGGTCGAATTTTTCAAAAGAAAAACAAAATTCAAATTTTTGATTTCA
AAATAATCTGAAAATAGTTGTGCAACTAAACAAGGGTCTGATCTCTGTGTGTGTAAAATT
TCAGGTCAAAATACTTTGAATGCGACATGTACAAAAAAGATAAATATGTAAAAAAAAACA
AATTCATGATCTCGAAGGATGAATAGTATCATGTGTTAAAAATCCCCACATTTGTCTTTT
TTACACAGGCCTCATTTCAATGTATTTAGTCCTGAAAAATTACACACTTGTGTATTATAC
CTTCATCAATCTATGTAAAAGAATCAGATTTTTTTAAATGTAAAAATATGAATTTTCATG
AAATATGAATTTTGCATTTGGAGGCCTCCATGAAGCTCGGCCTCCAAAACAATTTTCGTT
ACACTACGAACTACATATAGATCTATATAGACATACTTTAAAATATATGTTCATTTATTT
TATTTTGTATATAGTCCATAGTAGAATCTTTAAAAAAGACTTACATTTAAGAACGAAGGA
AGTATTTGAAACTTATGTGTAAAGGTTGAAACAAATGGAAGATTGCCCCAAGGAAGAGTT
AGAGTGAATGTGGATCTCACTTGTCATTTATACACTGTGTATTCCAAAATTTACCTACAA
TTTTTCAAAGTCAAACTTTATCAACATTTTTGAAAAAATTATTGACATCTAGAATATTAA
ATCAGTACCATTATATTAACCATGAAACGTGTTTGAGGTATCTTCACGACAATATTCATC
CAAGTGCGTTACTAAAATCAGTCACTAGCCTCGATAGGGTGGAGAGCGCGATCGGATGTT
CATATGCGATCACATACGGGGATTTTACCTAGGTTCGGGTCCTCGTGCTCGAGGTAAACA
CTACTACTTTGCTTTAATTGATTGTGGAAAGAAAAACCTCGTGTGAGGTGATAGACTACA
AGTGCACAAGATTTAGTTTGTCGCTTTTTCGAGGTAAAAATATGGATTCCACATGAAGCA
CGTGAAGTGATCTTTGTTCGATGTGGTGCGAGACAGGAGGTGTGAAGCGGACGCGTTGTG
ATATGGAGTTAAGGGTGTGGTCGCCTTTAAATAGCAGCTTTCGGTGTGATCAAGTGTCCG
GATGCGTCAATGTGTGGCGTCCAAGTTGGTTTCTCAGCCAACGAGCCAAATTAATGGCGA
CATACAGACGAACATGCATTGAACAGGCATGAAAGATATTCGTCATGTCCTGTCCAGTAA
ATATCTCTCTAACATTGAACAAGCGTGGACACCCGGGATGCGGCACGGATGACGCTCCCG
GTCGGCCCACCGCTTGAGTGCCGCCACCAGTGAGAGGTTGCGTTCGCTTTGGGCCGACGT
CAAATGTGGAGTGGCCGCTCTACCGTGGTAAGAATGCGGGCGAGACGGGAAGGTTTTTGA
TGGGCCATGTTAGTCAGGAGCGGGCGTGACAGGAGACGCTCGCAAAGCCTCTCCCTATTT
TGTCTTCGGTTTATGAGAAAAAACATGCTCGGACCCGCTTGCGGACAGATGCATGACCGT
GGTGGATGGTAAGACACGTCCAGCGTACGCTCCGGATGGTTGCGAATGGTTTGAGGGTCG
GCATTGGAGATGTCCTTAGAGCATTTACAGCCGGACTTAGCAAATATGACCCCCTATATG
CCCGCGGACGCGTCCGGTCAGTGACCGGGCGTGTTCGTTTTGAACCCTTACTTTTTTTTC
GTGCAGCCACACTTCTTAAAAAATAATTCTCATATGTCCGATCACTTGCACGTGATTGAC
GGAGAAGAAGGAAGAGAAAAAAAAAAGATAGATGGTCCAAAGTGGTGTTGCGTCCTACAC
GGCATGTCCGTGCGCGTCCACAAGCTCTCATGTCTTCTTCATTTTTTAAATAGATATGTG
GGTTACCGGTTAGTCCGAACGTTTAAGACGGTTTAAAGGAATCAATTGAATCGCTTTTTT
CATGACAAGACAGCATGTCCGGATATTTAAAAGGGATATGAGAAATCCGTTTGCCGATGC
TCTTACACCTGATAATGCTTCGATTACGACATGTTCTTAGAACGTCAACAATAGGCTACT
AACTCGTCGATGTAGCCACGTGCACTGGCTGAACGTACAGTGCTATAACAGCCACGTAGA
GCGCGCTACCTGATGTCGGACGGATAATAGTGTGTGGTTGTGGACGGATAGTCCACCCTG
CTTTATAGGAAAGCAAGAGGAGATCATGAGCTCAATCATTTTGAACAGCCACACCCAGAG
ATCAAGTTAAGCGCCCACTATGCAGCAGCTGAGCCGTACTAGTCCGAGTTAATGTCCGAT
TAGCCGTCCACACGTACGTCCACCAGTCATGCCGGCCGTGTATAAAACCAAGCCGCGGCG
CCACGCTACGCCACAAAGCAGCCCACCGGCGACATGGCATCCTCATCCCGTTCCCCTACC
ATAGCCCTCACCATTGTTCTTCTCCTCGTCGCTTGCCTCACCTGCAAAGTCTCCCCATCT
TCTCTCGTGTTTTTTCCACTCCGACTCATCAACGGGTACTTTCAACTTCCCGTCTATTTT
ACGATCTTTTTAGTGCCATCACATCAACTTGGCATGTTATTTGTTTCTGAACAAACGTTT
CAACTGAGGTATTATAGAAACATACCACATCACCTTTGAAGAAACCCTCTTCCTGGGGCA
TTGGTCATCAACATCATCAGGGTCATCTCGTCTGATCTTATACCGCAATGCACCGCATAA
CGGGCATGCATTCAAATCCTCGTACTCATAGCGGTAGAGGATGCAGTCATTAGGCATGCA
TGTATCTTCTACACCTTCAATCGTAGAACCTTCTTTGCTTCGTACGTATTATATATCAGA
CAATTCGTTATCCTTTGGAAGCTTCGTCTTCATTATATTCAGTAGCTTTCCAAATCCCTT
GTCAGATAAATCATTCTATGTCTTTCATTGCAGCAATTCCAGTGNNNNNNNNNNNNNNNN
NNNNNCATCTTTGCAATTTGGGTACAACCTTTTTTTGTGATCTTCTAACATGTGCCCGAA
CTTCAACTTCTTCCTTTCACTTTCGCATTCTCTATGTGCATCGACAATGACCCGGCGAAG
ATCATCATCGGGCACATCGTCTGGTGACTCTTGATCTTCAGCTTCCCCCGTTGCAGTCTC
ACCGTATTCAGGGAACATAGGATC