Contig Data
morexGenes
Links



Map Locations of contig_88729 (4656 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_88729

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80115 1 1173 bp MLOC_80115.1 Available Available LOC_Os08g13920.1, FRAME:-2, EVALUE:1e-114, 13108.m01491 protein glycosyl hydrolases family 16, putative, expressed





CDS Structure of MLOC_80115






Contig Sequence (4656 bp)

>contig_88729 4656 assembly3_WGSMorex_rbca.fasta
TACTGGCTACTTCGTTCGTTCGGCCACAGCTGTTAAGCGCGTCGATGACGGACACGAACA
TAATGCCAAAGCACGTGAAGATACCCCAAAAAGCAGCGGTCTCTCCACTCTCCAGCGAAG
AGGGCTGGCAGACTTTTGCCAAAGCGTCAACCAACGAAACGATATATGTCATGTCGGCTA
GTTCGTTATCTATACTATAATATCAACAGCACCAACCGATATATATTATCAGTGGAGGAC
AGCACAAAAGTATATACATTCAGTTCGCGGTGTCGGAGAAAGGATAGGTATATCATATAT
GCCCGCGGGTCTAATCCATTATTGTGACTGGCACGGCAGGGTATAAAGATGCATACATGA
TTGATGATACTACAAGGCGCTGTTTCTCTTCTTGGATAAGCAAATGTACGTGTCCATATA
CCAATATTCTTTTCCAGATAACTGACCGAACACGCTTTGCCGCGCAAAAACATATTTAAG
ACTGCATTTTCTACAAAAGTAGTGCATAATGTATGTGAATATATAAAAGGCACATAAAAT
TATGTGTTTATAATTTAGAACATGGGTGTAGGCACACCCAATTAAGCAAACAAAAATAAT
ACTAAAAATCAAAAACATGTGAAACTTTTTCGCGACAACCATAGTTCAGCATAATACTCA
AGTTTAAAGTTTCGAGGCAAAGTGAGTCATAGTGTACTCCGAGCGAAACGGTAAAGGTGC
AGCTACAAAAACCATGAATGGTATCGTTTATATAGTACTGATTCTGTTGTAATTTGCTCG
GAATATGGCTTTTTACCGTGGGTTATTATGTTATAGACCATGTATGTTGCCAAAAAGTTT
TGAAAATATTTGATTACTCTTACTATATTTTAATTATTTGCACCTAGACCCGGATTACAT
TGTGTATTTTCGGGTGCCCTACCACTAACGTTATACGTTTGTTTATGGTAGTTAATATAG
CAATTATTCTTATGAAGTTTTTTTGCTCAGTGACACCAAAATAAAATTCCAACCCATAGC
TCATATACTATAAAAAAACAAAGGCACAATAAAATTTACATGCTTTTTTCTTTAGGAAAA
AAAAAACAAGTGTACAAACAATCGCCCACACATTGCTGTAGGGCTGCTTTGTAATCACAA
ATTCACAAAAGAAGAACAAGAATCATGTACTGTATCCAAGAAAAAAGGTAGTATCAATGT
CAACACTGGATGCCCGGCCGGTGTGGATGGATCAGAGCTAGGATCAGTAGCGGTTGCACT
CGGCGGGAAGCCCCTGTGGGAACCTGTACCCATCCTCGCAGTAGTTGTACCGCATGTAAC
TTCGCTCCGCCCACTTCACGGTGCCCCATTCGGCGCCGTCGAGCTGCTTCTTCATCCACC
TGTCACTGCCGGCATGGCACGCGCCGCCGCTGACGCAGGCGTTGGCGTAGTAGTTGCGGT
ACGAGACAACGAATGGCGCGTTGGACCAGTTGATGGGGATCTTGCCCTTCTCGGTCGCCC
AGTAGCTGCCGTCCCAGAGCGTGGCGTGCAGCCTCATGGGCTTGGAGGTAGGGTAGGGCA
GGCCGGCGAAGCGCTTGAAGGATCGGATGAAGAGGTTGTCCACCTTGAACAGGATGTTCT
CCGGGTTCCAGATGATGGTGTAGGTGTGGTAGTCGGCGGCGGGGTCGAACCAGAGGTCGA
ACTGGTGCTCCTTCTTGCCGTCGCCGTTGGCCCACACGTTCGTGTTGAGCACCACCGGAT
GGCCGCTGGAGTTGCCCATGAACTCCATGTCGATCTCGTCGCGCCACTCGTCGTCACCGG
AAGAAAGCTGCAACCAATAGCAACGCTGGCTCAGCTCAAGACAAATGAAGATCGACAGAG
CGAGGTTAATTAATGTTAGTCCTGGTCAAAATTAACTTGGCTCATGAACTTACGTAGAAG
CAGGAGACGGTGCCAGCGGAGTTCCCCGGGATGAGCTTCATCTGGATGCTGAACTCACCA
TAGAGGTACTGCTGCTTGGAGTTGAAGCCGGCGGCGCCGGATTGCTGGTTGAGGTTGAGC
ATCACCACCTGCTGGCCCGAGGCGTCGTATCCCGTGCGGACGGTGCCGTCCGTGTTGAAC
CTCTTGTCGAGCCAGGACTTGGCCGAGGCGGCCTGCAAGAGCGCAAGAGCCACGGCGAGC
ACAGCGAGAAGACGCCGTGCCATGGTAACTGCTGTTCTAGCAATCTAGCCTAGAGAGCTT
CCTGGAATCAAATGAGCTTTATAAAGTGGAGTGCCTTGTGTGGTGTGTGGTGTGTGAGAA
GAAGCACGGGAGATGTCGCGGTTTTATAGTGCGTGGTGCCGTCCAGCATCACTTTCTTTT
GCATGCATGCATTATCGATCTGGTGGGCGCGAAGGTGGTTACAATTATTCGGGCAGCACA
TGGGTACAATCTGTCATAATCCCTCGGGTGTTCATACGTACATCGATGGTTTGATTTGAT
GAGGTGTCTTATAAAAGGAACACTTAGATTACCGTGGGACCCAGAGATTGGGTGGTGGAA
CCATTGATTGATGGTTGATATATATCAGCAAAGCACATATTAAGTGATGGAATCCAGTCG
AGCGACACGTACGTACGTAGGTACCGCCACTAATCTCCGCCATTCATTCATCGTTGTAGT
TGCGTGCTCGTCGGTTAACCACCTCGCCGCGCTCGAGCATGCCATGTTACTCGCATGCAT
ATACCGAAATTAAGGGACCTAACTCTAGTTAGCATCTTATTAATCGGACAAATTAAGTAA
GCTATGATGGGGTCATCACAAAGAAAAGGCTATGATGGGGCATGTGGGCCATCACTCAAT
GATGCATTGCGGATTAGAGATAGAGTAAAGCTTGCATGCCACATTGGAACTAGATAGATG
GTTATAGCATCTCCAACACTGAAACGCAAACCTTTCTCGATGGCTTTGTGAGGACCATAA
AAGTCATCCAACGTGGCCTTGTATCGGTTTATGGTACGGTCTGAATATATTTTCTTTCGC
AAACTGAAGACAAATGTAAAAATCTTTGCGGGAGTCCGGACCGCTCTCATGTCCGATTCT
GACCGTCCTGACCCGCCCAAAACACCTCCTTCATCCCGCGTGCTTTTGGTCAGCGTCACT
TCAGAGCATCAGCTTTTGCATTCATGCCCGATCAGAGCAGACGCGGCCGCTCACTCGCGC
CGATGTTGAAGCAGTACGCCGGCAAAGAGAGCGCCGCCGCCCACATTGCTTGCCGGTGCA
AGCATCTGTTGCATGTTCACACGACACGACGACCGGCCATCTGTCCGTCTATCGTCCACA
TTGATGGCACGCGGTTGTCGAGGCATCTTCTCCCGCGCCACTTCTTCGTCCCTCTATCGC
CCACTATTGCTATATAAACCGTTGCCCTACCATAGCCGCAGTCATACGTCTTTGATCCCC
CTCCGCACTACTCCAACCATGGATTCCTCAGCCACCAAAGCTCTTTAGGACGGGCTGACA
CTGGACCAGAAGAAGGAGACGGTTGTCATTGCTGCCGACCGGCTTGCCGGCAGGAAATCA
TAGGACGCCGGCGTCCACATGGAGGACATTGACGACGATGGACCGGTGTCACCACCCTCC
TCCGTGCCACCCTCATTGGTGCATTGCACCATGACCATCGACGAGGCATGTGCCCTTTAC
ATGGACATGATGCGCGAGGAGTAGGAGGAGAAGCTCTGGGAGGCGCAGGCCGACGCAGCC
TACAACCACCACCTCTTCACAACCACGTGCACGCGGAGGAGCAACTCCCCATCGACACGG
CGGTCGCGTCGGACGCGAACTTGGCGATGCAGGAGGCGTGCTCGAGTCCTATGGCTCCAC
ACGCGAGATCCGCCTCGCCCGCTGGCGGTCCCGCCAGCGAGTGGCGGAGGTGACGGCCGC
CTACAAGAGTGCGGCGACGCGGGCGATACGGTGTTCGGCGAAACCGACGACGAGAAGGAG
GACCTCACCGATGCCACGCCCTGTGATACGTCCATTTTGCATCATGATTTTCTATTTATA
TTTATGCTATTCTTGTCCATTATTTCACATTATGATACAACTCTTATGTCTTTTCTCTCT
AAATCTACAAGCTACATCACAAAGAGGGAAATTGTCGAAAACCAGAATTCTGGACCTGGA
AACCTAGTAAAAGGCTAAATATCACTCGACTCCAAATGACCTGAAACTTCACGAAGAATT
TTTCTGAAATATATCTGAAATATTGGGCCAAAGATATACCAGAGGGGGGCCATCTTCCAT
AAGGTGTATTTTGACCACAAGCCAATAGGGCGCCCCCCGGTGCGTCATGTTATCTTGTCA
CCCCGTCATAGGTCCCTAGGCCTGTCTCTTCTGCTATAAGGTGTGTTTTGACCTAGAAAA
TTTAACAAGAGACTTTCCGGACAAAGGGCCGCCGTCTCGAGGCGGAAACCTGGAGAGAGG
CCCCTTTTTCTCTCGGGCAAAGCGATTCTGTCGGGGAAACTTCCTTCCGGGATGGGAGAT
CAAAGTCGTTGTCATCACCAATGCTCCCTCCTTCATAAGAGGATCAATGAAAGGATCAAT
ATAGTTGACTAGAGGGGGTGAATAGGAACTACCAATTTTTAGCTTGTCTTAACAAATTCG
CATTAGCAACCAAAGGTTCTCTATGTGAACAACTAG