Contig Data
morexGenes
Links



Map Locations of contig_88516 (4022 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_88516

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80078 4 1678 bp None Available Available None
MLOC_80077 6 2355 bp None Available Available None





CDS Structure of MLOC_80078






CDS Structure of MLOC_80077






Contig Sequence (4022 bp)

>contig_88516 4022 assembly3_WGSMorex_rbca.fasta
AAGGGGGGGCAGCCCGGTGCATGTAGCTCCCGCTTGTGCAGGGTCCGGGGAAGGGTCCGA
CCACTTTGGGTCTATTGTACGNNGCCTTTCCCTACATTTCTGTAAGAGGCTGTTTCCAGG
ACTTGAACAACGCCAGGGCTCTCCTTCAATTCCAAACCTCCAATAAAGCACCAAAATTAG
CACGACGGTCAGAAGTGTGATATGTGTAGACACATAGATCCTACAAATACTAAATGAATT
GTGAAGGACGGAAGTTTGACCTGGACACATAATAGGCAAAATAACCAGTCAAAAACTTAG
AAGCAATAAACTACAACATTAGATACACTCACGGGCTAGAACAATACAAAGAGGAACTAT
CTCAGCATGCCCTAATTTCTATCATCTATTTGAAAGCATCAGACCACAAGATTGGATATA
CTCACAGTCAGAATGATACAAAATGCACAAAATGCTCCAAGATATCTCACATGCCCCCAA
TGGTTTTCATAAAAAAATAGCAAGACTAATGTTACAAAATTGCTCATGGATTAACATAGG
CACTAATGACAGACTGCCAACACCATGGTACAGGGAATGAGAAGGAATTTACTCTCGATA
CACGCATGATCTATTAAATACATATGAACCAATTATAGAGACAAATTTAAGGCAGTGTTG
TCAATCTAGAGTTCCCGCAAAAGAAAGCAAGTAGAAGACCTGATTAGCAGCAACACATGA
TTCCACCGGATGACATTATTAATATTGTAGGTGCAGTTGCTTAATAAATGATGATTAGCA
TGAATATTGACCCAAGAGCATAATCATTGGTCTTGGATAACAAAGTCACTGTTTTTCTGG
ACAATGGCAGAATAAATCAGTGAGACAAGTAGTGACAAGAAAGGATAAGCAACCACCAAA
TACAGTTAGATTTCAACAAACTAAAGGTATTATGTGCATTGGATACTAAAGGAATCCTAA
ATTTAATGTTTTTAGTATATCATTCTGTGAGCCTAGCATGTACTGCGATCATTTTATTTG
TACCATGCCACTAACACAAAATCCCTTTGTCCACTTAATGAGGGTGCCTAACGATATCAA
GGTTTGGTGTACTGGGAAAGAAAAGGTGAAACCCAGTTCCCTTTGCCTTCCCGCAGGCAA
GTGGAAATCATCTCCTTCGGTCTCAAGTCTCAACAAATCTTTCCAACTGAGCCACAATGA
AATCAAATAGTTCCTGTATTTGTGCTTTTGAAAGTATGTAAATCATGTAAAAATAAACAA
AAAATCTAATAGAAGGGACTTAGCAGACCAATCAAATGCACTTACGGTGGAAGTCACAAC
TATCAGATAAAGTGGAATGGGAACCTCTTCATATTGTTGGACAACACGTTTCTTACTATT
AGCAATTTGCCATGCATTAATAGCAATTTATTTGTATGAGCGTATAAATAGAAGACTTGT
AGAAAAATTGGTGAGGCACAATTTGATCTCAGAGCAATTTAGTGAATAACAGACTGCATA
TATTCTTTGTGTGGATCTTACTATTAGTGATGGAATTAAATGTCTAATGGTTGGGTGCTT
AACATGTACTCCCTCCGTTCCAAANNNNNNNTCTTAAGCTTAGTACAAATTTGTACTAGA
GCTAATACAAAGTTGAGACAGTTATTTTGGGACAGAGGGAGTATGTGATAATAAACAAAG
GAAATAAGTAGTGGGCTGTTTCGTTTATGTGGGATGTGGGAGGACACAAAACAAAGATCA
CGCCATCAGGTACGACAGTTTGGTAGTGATAAAGCATTGTCCATATATCCACATTGGTAT
TGAACAACATATCAAATATATTCAGTTCTAAAAGGAGAATAGAAGGATCTCTTGTGAAAT
CTGAAGGAAAAGTTTATTCAAGGGGTAGACGTTCAGCTACCACTTGAAACCCAACTGAGT
TTTTTATCCCATGGACACTACGTCTTAAGGGCACATATATTTGAACCAGTGTTGGACAGG
CCCTGAAGAACGAACCCCAAACTGGATAGAACAACATTGCCAAATAGGGAGATTTAGAGT
GGATTGATGAAGCTTACCAGGCAGTCCGCACGCCGCCTTGAGAAAGCAGCTGTGGCGGCC
CTACGCGCAGTTGCAGTCCGCACCGCCCAGGGCGCACCGCGCGCAGGGCCATTAGCCCCA
CCAAGATGCAGCATCGGGGATAGAGACGGCACTGCTGTTTGCCGGCCCATCGCACACCTG
TTCGCTGCGTAATCTGCCACCAAATCACTCAATGAAACACTAGAGAGGGGTGGAGGGGAA
AGGGGTATCGATTGGCGTCGCATGCGTACCAAAGAACTTGATGACGATGGCGGCTGAGCC
GTTGAGCGTGATGATGTCCTTGGATGCCGTCCGCGATGCCATCTCTCCTCGGCATCGCGC
TCACCTTAGGAACCAGCATCCATCACACGTGCATGGAGCCCGTCGGGCGACGCCGCTGAA
GAGGCCGCCGCGACGACCGCCCCGAGCCTCATCAGGAAGGGAATGAAATTTGATATGCAG
AGCAATAACCTTGAGTACTGATTATGTCATTGGCATAATACATCAAAGAACGAAAGAGAG
ATGATTTACTTCGGTAGCACCTAGTACAGTATATATGAAGGATTATATATTGCATAACTG
ATCAATTAACAAATCCTCCATGTATAGAAATTCTATCAGCCGCACAGTAAATAGATGGGC
CAACATTTGGTCCTTTTTGGTGAGCCAAAACGTCAGCAGCTCTTGTTAAACAAGTTGATT
AAAGGAAATCGCAACAAAATTCATAGTAACAATCATCTAGTATTACGGTGAACTTATTTG
TTCCTACAGGGAGCCAGGACTGCAATTCAAATCTTGTAAATACGTGGTATGGTACATATT
AATCTGGTTCAGTTAATTTGCTGCACCAATTTGATGCACACACGCACAGTTTGCTGCACT
TTCCTTCAGAAGTGGCGAGCCAAAAATGAACCAAAACGTCATGGCATCCATTTCAGATGT
GGGGGTCAATTCGATTGGGGGGAGCTCACTCACCACGTTGGCTTTGTTGGGTGGGAGGTG
AAGATGGATGGATCTTGGCCTGCTGCTCCACCTCCTCTCCTCTGACCGCTCTACCATCTA
CAGAGAAGAGAAGAAAAGAGACAGGGGTCAGAGCAGAACAGAGGAGACGGGAAAAAGTTG
CCTGCACATTACTCACTCATGCATCAGAGGAAGAAGGAAGAAAGCCAGAGGAGGAAGAAG
AGAAGGAAGGGGAGGAGGGATCTGACCTAGGGCGCCGTCGGTGGAGCTCTCGGGCTCGCT
AGGGTTTCGGTCGGAGGTTGAGGTTGGACGTTGCGGCTATGGGGTGGAAGGAGGAGGACT
CCTCTGCCGTTGCTTCGTGATGGAGGAGGAAGGAGCTCCAGCCGGCGGCGGTCCTCTCCT
GGACGCCGCAGCCCGACGACGGTGGCGGCGCCAAAGGAGGCTTCTTTGCATTGCAGCGAC
AGGAAAGAAGAGGAGTTGTGGTTGTGGTAGCCGTCGTTGTCGCTGTGGCCGGGGTGAGGG
GTAGATGGTGGCGAGGAAGACGCCGGAGATGGCCGTCGCGTGGAGGTGGAGGGCGGTGGC
GGTGGCGGTGGGTGGGAATGGATTTGGGGATGGACGGAAGCTCGATCGCCATGGCAGCGA
GTCGGTGAAAGTTAGAGGGGGTAAGAGCACATCTAGCAGACCCCCCATAATCCTGACCCG
CAAAAGGCGTTTGCATTTGCGTAAAACTACTTTTACGGGCTGGCACATAAGCACATCCTT
TAAATGGACTGATATAAAAGTATATTCGTTAAATATGCTTTTTTACGGGTCGACTTTTAC
GGGGTCTGTTCGGACACGGCCGTGACGACCCGCAAACAGAAAACGTTCAATTCTCGCATT
TAACATAAGTTCACACAAATAAGTTCAAATTCAAACAAACATAACACGGTTTTACGCGGA
AATAAAAGCCAAGTTCAGTAGGACAAACGCAAAAGAGGGTTGATGGGGTTATAGTCCTAG
GG