Contig Data
morexGenes
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Map Locations of contig_88427 (3276 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_88427

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80060 2 1138 bp MLOC_80060.1 Available Available LOC_Os02g45570.2, FRAME:-2, EVALUE:7e-92, 13102.m05113 protein growth regulating factor protein, putative, expressed





CDS Structure of MLOC_80060






Contig Sequence (3276 bp)

>contig_88427 3276 assembly3_WGSMorex_rbca.fasta
ACGAAGTTATACGACGCCGCGATGGCTTCATCCCTCGCGTCCGCCGCGCGCCTGCAGTCC
TTCCTCTTGGGCGACACCCTTGCGTGATGTTCGGGCGTCAGCGTCTTCTTTGGTTTGGGC
GCGGCGGCGGTCTTGCGGGGGGTGCGAGGCTTGCCTTTGTCGGAGGGGACGGACGTCATG
ATGGACGAGGCGAGGGAGGCGAGGCCGGCGGTGGCGGCGAGGTCGTCGTCCATGACGGGG
ATGGGACGGGAGCGCACGCGGGCGAGAGGATTTTGGGAGAAATGAAGGAAAATGGTGAAA
GCTGCCCGAGAAATGAAGGAAAATGGTGAAACCTGCCACCGACCAACGGGGCCGAGGGAA
GGAGAAGACGTGCATGTCGGTCTCGTGTGCGTGCCAACGTAAATTCGACATAAAAATGAA
TCGCGTCGACAGACGGACACCAAACGGATGCCAGTTTGTTTGAATCGACGAGCCCGATTT
TTATGTTCACCCCGACCCAAACGTAACGAAATGGATGGCCCGTTGCTCTTATCCCGTTTC
CGAACAGGATTCACCGATGGCCGTTCCCATGCGGCAAAGGAGCAAGACGGTGCGGCGCGG
GGCCACTGCGCCACGCCAAGGCCAGAGTGCAGCAGCATCCAATGCCTCGCTCTGCCCGAG
CCACCGCCTTCTGACACAGGTCAGTGCATGCAAAGCTACAGGCCTGCGGACTGCTCCCGA
GCCGTGCCGAGCGGAGCCGCAGAAGAATCCACTCCCCCGCCACCGCGGCACGACCCCCCA
CAGCCCAACACGACGAGAAAAATAATCGCCTGCCTGCCACACACATATCACAGGCGCACG
CACAGCAACGAGCAGGGACGCATGCCATCGAACCCAGCAGATTTATACTAGTAGTTTCAA
AAGCTGCCCAAGAAAAAGTTACATGACGCGACAAAATCCCTGCGGATTTCCTTCTTGCAC
GATTTTGCCCCACGCCCACGCGCCATGACGGACGCGGTGGGAACGGGATGAGGCCCTCGG
CCTCAGGTGGCGTGCGCGGCGGCGCTGTGGGTGGCGTGGAGGATGCCGGCGGGGGAGAAG
CCGATGCCGCGGGACGGGGCGGCGGTGGCGGCGGTGCTGCTGCCGTTGTGCGCCGGTGCG
GCGGGGGCTCCTTCCACAGGCTTTCTTGAACGGCCGCGGCCCCGGTGGACGTGCCGCTCG
CAGTACTTGTGCCCCTGCACCACGTCGCGGGAGCACCGCCACTTCTTGCCGTCCGTGCGG
CGGCACCGCCCGGGCTCCGGCTCCATGCTGCTCCGGTAGTCGAAGCACATGCTCCCCAGC
CCAATCACTGCCATTCAAAGACGACCAACGGCTCATCCAACAATCCGCCGACACTGCACG
GGATGGCATAGGAAACACAGATATCTATTTCTTTTCGTTTTGTGTCGTGGCACGTACGCG
AGGGGAAGCGGTGCGGGCCGAAGGAGGAGGCGGCGACGCTCTTCCAGATGGGAAGCACGA
GGTGCACCGGCACGGGCGCCCCCGCCGCGAAGTAGCGGTAGATGAGCACCTGGTGCTCCA
GCTCCTGCTGCTGCATGAACGTCAGCACCGACTTCGCCGCCGCCGCCACCGCCCGTGCTT
CCAAGGCGTGCTGCTCGCCACGGCTATCGCCGCCGAGCCCCAGGCCGAGGCCAAGACCCA
GCGGCGACGAGACCGCCATCGTCACCGCCCCTACCATGCAACAACAACACATCGAACAAC
TCAACATCTTCAGGTGAACACAAGCTTACGGCTTTCCTGGTGTGCCTGCACGTACCGGCG
TTCTCGTCGGCGGAGGAGAGGCGGGGCAGCTTGGACGGCGGCTGCAGCGAGTCGCCTTCT
TTCTCGTCGGCCATGAGGAGATTCCGGCGTGCGCGTTGTTGGTTTCGAAGTCTATGGAGG
GAGAGGGTTCTTGACTCTTGAGACGGGGGTCAGTGCTTTTGTCAGAGGAAGTGTGATGCA
GTGTGGATATATTTATGCGTGAGCGTGATGATGGCTGGACTCCCCCATCGTCTGGGTCTC
TCTCTGGACGCTCGGTAAGTTCTGTGCTCAGGCAACGGTAACTGTCAAACTGACGGGATG
CAGAGGGTGTAGAGCGAAGCTGGCACGGCATGGAGAGGGCCCTGGTGCCGCGGTGCAGGG
AGACGACACGCATGTTTTTTAGACCTTACATGCTCGTGTTTGGCATTCATTTCAACGTCG
GACGGACACCGCCGCGTGACTTCGTGAAAATGCGGTGTAAGCTGTACCCCGGTTTAAAAT
AATTAAAATAACTTTAACCGATCCATCTAAATAAACAATGATTTTGTTCGTCTATTTTTA
CGTTTGGGTCGATCCATAGATCCAACGCTGTCCCGTCCTATTTTGACGACACGTAAAGAA
AAAATTCAAATATTTTTAAAAATAAAAACAAACATTAATTAAACATTAAAGCCAGTCACA
AAGGCCGACGAAAGTCCACACGTCTCCATTACATTAATTGAATATTAAAAACTTACACTA
GAAGGCTGCCCTAGGCGTCCTCATCGTCGACTTGGGGTCGGTGAGGTCAACCAGCGTCGG
CGTACGGCCGGTCCAGGAAAACGTCGTGTTCCACAGCGCCACTGCGTGCGACTCCGTCGT
CTGTCCCGCCCGCGCGGGCTGTGCTGGTGACGGTGACAGCTCAGCACGGGCGCGCTCCTC
CTCCTCCATGTCTAGTCGTTCCTCCTCCGCCTCCCGCTCGAGCTCCATCTGTTGCGCCCT
GTCAGCGTGCTCCTCCGCCAGGTGCAACACCCTCTAGTGCTCGAGGTAGGCGGCCTCGTA
CTGCAGTGTCGCACCCAACCAGATGGGTGGCGCGTTGACCCACTCGCGGAGGCAGCCGGT
CCACTCGTAGACCTTCGGTTGCGACTCACTCTTCAACGGAGGGGGCACGATGCAGTCGCC
CGCGGCTTACAACATGATAGCCTACGCGAGCTGCGCCTCGTACGCCGCATCCTCCTCCTC
AGCCGTGCGTCACTCTTCCTCCTCGCTCTCGCGAAGCGCGGCTGCGAGCGCCGCCTGGTA
GGCGGCCTCCGCCTCCTGGTCCTCGTCGTGAACGACTGGCGGGGCGGCGGAGGGCCTGGT
TGCACGTCGCGCATCCCGCGTCGGCGCTGTTCCTCCTGCTCGAGCACGAACCAGACCTCC
GAGTGGGGAGAGTCGACCATCTAGATGGGGTTGAGCCGCTGCTCCGGCGTCAGTTGCCGC
CGCCGGTGACTCACCTCCTCCGCGTGCGCCCGCGCC