Map Locations of contig_88353 (3944 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_88353

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_80043 1 1312 bp AK373353 Available Available None





CDS Structure of MLOC_80043






Contig Sequence (3944 bp)

>contig_88353 3944 assembly3_WGSMorex_rbca.fasta
TATTTCTCCGGGATCTCCGGTTTGAACGTGCGGGAACTGGGCCACTGGGCTCGCCGCAGC
TCACGAGTAAATGTTGGACAACCCACCTCGTAAGGCAGGTCGCGAGGATACCCTGCCACG
GGCTCGTCGACAGTGGGCCCTATGCGCTTATCATATTGATGGCGTGCTTCCTGTCGTCAT
TCAATGGTGGTCCGGGCGTCTTCTTTGCGTCGCTCTTTAAGAACTTGACGCTGAACGCGG
AGGGTCCATGGATCAGATGACATCGTTGAATCGTGAGAGACGTTGATCCGTCGAGGCAGC
GATCGCTTCTGCCACCGTGGAGGAGAGTGCACCATGGTCGTGGCGCCTCTAGCCTTCTCG
CCATTATCGTGCACTTGCTTGCTGGACTGATGTTTCGAAGGCCCCGCTTACGGCAGCCCA
TCGCCATTAGCGAGGCCGATGAGGCTCTGAATGGTAGCTCTCCATTCTTTGAGCTTCTCC
GCCACAAGAGGAAAGTCTAGGAGCATCTGGGCTCGTGCCAACGCTTCCGTTGTTGTAGGC
GTCGTCGTGAGGTGCGAGGAACGTGAGGTGCTCTTACTCCTAACCGTGTTAGAAGGAGCA
CCATCACGGTCCTGTGACCGCATGCCGCTTCCACCAGCTTCCTGACGTGCATGTTGGCCC
TCCGCATCACGAGAGTGATGCTCAAGAGTCTTCCCTCAGGGATGCTTGGAACCGCCAGCG
TTGCGGTGTCGCTCGTCGCATGCGGCTTGGGAAGGCCGCAGTGTATGTGCCGACGTGGGT
GCCTTAGAGGCGCCCCTCCGTCCTTGGAGTTCGCCACGCCGCCCGTAGGCCGCGCAGCTC
CATCCTTACACCCATCGGCGTGCGGGTTGTTGTTGTGGCTAGGAACGACGCCGCTCGCGT
GGCTTGGATCACCAGAATGTAGCGGAGGCTCAAGACCTTCGCCTCCTCCGCCCGCGCCCA
TACCATCGCCCGTCCGTGGAGTCACAAGCATACTGGATGCAGGTGGATCAGCCGCCGTTG
CACCCCTCTTCTTGGGGGCCATGGCGACGAAGGTGATGAAGAAACTAACGCGCCGATTGC
TAGGTCACGTTAGCGCAACCTCTTCCCCCCTACCTGGCGTGCCAAAGATGTCGGGGAAAC
AAACGACACCTATGGGATCGCGTGGATCCCTTTATGGTTCGGCGGGGAGAGAGGATCGCA
CCATGAGCAGAACCAACGATCAGCGCAAGGGGAGTTTTTACCGACGTTCGGGCCGCTGAG
AAGCGTAAAACTCTACTCCTGGCTTAGGTGTATTGTATGTGTTCATGGTTTTGGCTACAA
GAGCGCTATGTGTTACACAACAGCTACGCAAAGAGTCTAAACCATAGACTGAGAGTAGAT
GCGAGAGTATCTGTCCGAGACTATATGTGTGAGACTCGATCAGACCCCCCCCCTAAGCTA
TGCCTTGGGCCTCCTTTTATATGTCAAAGGGGTCACCAACAATGGCGTAACAGGACACCC
ACGAGGTGCACAGTTAACTGTGCACGCACGGGGTGTACAACTATTATAGTGTTTACTGAC
GGTTTAAGACAGACGCATTAAACGCTCTGTCACGCATCCGTGACCTTGTGTGACACGGGA
CAGGGACGCGTCCCATTGGCACTGCTCAACCCCCAGATGTCGCTCGACACGTACCCAGGA
GGAACGACACCTGGCCGCTGCGCTGGAGCAGTGGCAGGTTGGTGGGATCTTGCCGGGTGC
ACGTCTTGTTGGGGCTCCGCTAGCTTCCCCGACAAGGATCTTGTCGGGATCCCTGCCTCT
GGTCTTTAGTCTTCTAGTCGTTGGCTTGAACGTCTTCTTGATATCTTCGTACTTGCCTTT
AGCTGTCCTCCGACAGGCTTTGCCGCGGGTGTGGCTACAACTGCCCGTGCACAAGTAAGG
GGTGCTAAAGGCCCAAACTTTAGTGCCATGTCTTCCTAGTGTTATATGGCAACTGAGTGA
AACAGTCGTGTGTGCATGCGTGTGAGTTGCCATGTCTTCCAAGTGTTACATGACAACTTA
GTGAAACTGTCGTGCCCGAATGCGTGCGAGTTGACATGTCTTCCTCGTGACAACTGAGTG
GAACTGCCATGCCCGCATGCCTGTCAGTTGTCATGTCTTCTCCATGTCAAATGAGTGGAA
CTGGCCGTGACCACATGCGTGTGAGTTGCCATGTCTTACGAGTGTTACATGGCAAGTGAG
TGAAACTGACCACGTTCGCTTGCCTGTCAGTTGCCATGTCTTCTAAATGTTACATGACAA
CTGAGTGAAACTGTCACGCGGGGGCATGCGTAACCGCGAGGTGGCAGGCCGGATGTACGG
GTCGTCAGGTAGGAGACCGGACGTGTTGACGTTAGCTGTTTTGCTCACCGAGAGACGTAT
GTGCTGTTTTCCTTACACATTATACGAAATGTAGAGGCAACACTCCTTAACGCACATACG
TGTGGGCGTTAATTACGGTCAACTTTAAGAAAAAAAGGTACGCGAGGCAGACCTTTGGAC
GAGATAATTACGGTCAACTTTGCTGGCGGGCGACTTGAGACCCGGTAGCCAGGCGAACGG
CCTTGATCGACGAATGGGGAAGCGCATCGTCCAATCAGATCGCGCGGGCCACGTCACGCA
GCGCGAGCGGACTTTGGGCTCGACCCGACCCGGAATGCGGCTAGGCTGTGCGTAGATATA
AGGGACACGCACAGCACGGAGAGTATTCCGCGCTCGAATTTCACGCACCAGGTTTGGAAG
CCAGACGGACAAGAGCAGGATCAGCGAGTTCGTCAGGTACGCGCGCGTAATCCTCCCGTC
TCATCGTCACCATGCTCGATTGATTGATCCCCCGCCTGCGCGTCGTGTGTCCGGACAAGA
TACGTTACCTTGCTGTCTCTTTGTGGTTTAGATCGCCTCGGCTTGCGTCCTATACATAGG
GAGTTCAGATTTGGTGAGATCTTGATGAGATTTCGGTTCCTTTGATCCGTTTGATGGATG
CATGGTTGGGAGTCGGAATATGTGTGCCGATCCGCCCGTGTTTCTCTGATTCTTGTTCGA
TCGCGTTTTCATCCGTAGATTTGTGGTTTCGTAGATTCAGGTTGGGCGTAGGAGATTTAT
TATGTTCCGTATGATCAGTGCGACCCGTTTATATGTGGTTGGATAATTTTCGCCCTATAT
ATTTGAATTCCCAATTCGATCCATGCTAACATCCAAATTTCACTGTTTGTGTTATTACTT
TACCTGACATGTGGTTCTAAGGTGCTGGCATCCAGATCAGTGAAAAAATTAGGCACGCGA
TAGCAGCATAATGTTTCGCTAAATAAACCAGTGTATAATCATATTTAAAGGGCAATGCTA
TTTTTGTAATTGATCCGTACAGCCTACTTAGATTGAAAAAGAGTACAGTACTCTGATCAG
ATATACACCTTCTTAAGACACTGAAGTTTAAAATGGATCAATCTGAGGATTTAGAAAATT
ATGGTTGAGTAGTATTTATCAAATTTATTCTTCCCTTTACTGGCAAGACTCTAATTTTCA
CTAAAAATTGCGTATAGATAATGTAAAATAATTCTCCTGGTGTCTTGATGATTTATAATT
TTGTTTTCGTGTCACCCCACACTGAATAAGTGTCAGCTAACTGTTGAAGAAATTCAGTTT
TTTGTCTGACAACACATGAACACAGTTTGTTGACAAAATTCAGTCTTTTATTCTGACTAA
ATCATAGGATTCTGTGAAGGTAGCTTAACTTCATCACAGCTCATGTTATACCTGGAACTA
ACCATGGTATATTATTTTCATTTCCATAGGTTTTCAATCAAGTTACTTTCCAATAGTAAG
TTTGTAGCCTCCAACAAATTGATGTAGCAGTTTAGCTATGCATCTTAGGCCATGTTTGGA
ACCATAATAGATTATGATAATCTGGATTATGAAGATAGATTATA