Contig Data
morexGenes
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Map Locations of contig_87846 (3593 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_87846

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79958 1 638 bp MLOC_79958.1 Available Available LOC_Os04g24520.1, FRAME:-1, EVALUE:2e-37, 13104.m02295 protein ribosomal protein L51, putative, expressed





CDS Structure of MLOC_79958






Contig Sequence (3593 bp)

>contig_87846 3593 assembly3_WGSMorex_rbca.fasta
TACATACGGATGTACATAGACATATTCTAGAGTGTAGATTCACTCATTTTGCTTCGTATG
TAGCCTTCTAATGAAATCTCTAAAAGGTCTTATATTTTGGAACAGAGGGAGTACTATGTA
TGCAACTTATATTCTTGTGTTTTTATTTTGTTCATCATAGTTATACAATATTTGGTTATC
GTCGACATTTGTTTTCCATACCATTTGGACATCACAATGATATATGTCCTGACATAAGCA
ACATAATCATGGCAGACGATTCAACAGGTTCATGATTATACATGCAAACATACTTTCAAG
CTTTGGTTCATGTTGTTGCAGATAGTATACAAAACATAGAGAGTTTAGCTACAGGCGGAG
AAGCAAATTTCATGAAAATCACACGTGGAAGTTTTCAGAAAAGATCCAAAACAGTTTGAA
CTACAGGTGAGGGCAAGATCGACATCGATGCAAAACCATCAAGAACAAACCCAACCCCAT
TTGTAACATACGAAGTATGACCAGTATGGTTTTAGAAATATAACTTTTCTGGTGAAAACA
GTCCTTGAAGAACGATAGGAAAAATAGTTACCTTCTCAGTAATCAGTTGTACAAATTCAA
CACTTGAGTACAGTCATGGTACTGAAATCAAGACAACGTAACATCCCATGTTAACTTTTT
CTCTTATTTGTGAAGACTTAATGCAAGAAAACTTGGCTAGCCAGACAATCTTTTGCTTTA
AGCAACTCCTGCCTTGGCTAGCTCCTCCAACTTCTTGTCAATCTGGGCTTCTGTCAAGCC
ATCCAAGCGAACGCACCTCTCCACACCCATATCTGACCAGTAGACACACAGTTATATGAC
ACACCGAATACATTAGCTTCGATTCATTAATCCAGTATTATATGCATGAAACAAAAGAAA
GGGCGTATATGGAAATTTCAAGCCAAAATTAAGCATCAAATGTGAAGGAACGAAATATTT
GGTAATCCATATTCAGTTCTTTGTTAATCATAACATGCCTAGCCCTGTGTTTGCAAAACC
GTAATAGTTTATCACTTTTTCTCAGTTAGTATGGGTTGTCTGCTTCCTTCAGTACATGAC
CTATCTCTAAATTGACAGTGCAAGACACAAGTGCCGCAACTGAGTAAACAATTGCATAGC
CTTTTCTTCATTTATTATTTAGTTCTTTAATTAGCACATATCCATTTGGAGCATTGTGTG
CAGGATTTGAAGGCCCGTTACATGATCTTAATCCGTGCTTCCTTTCTCAGCTACCAGGAA
GCCCGTAGGCATCAACATTCCAGACACACTTGAAGAAGAAAGAGAGCTGAGTCAGAGCCC
AGGAAAAACTACATAAAATAATTACTGGATTCGCTATAATGAGTTCCAAATCCCAATCCC
AGTCGATTGACCTAGATCAGGAGTTGTGGTAGCTTCAGATAGGCCAGAGTTTGCACAGAG
TCATTGATCTTGAGTGAAACAAAAAACGGTACCACACGCAGCAGCTAACACCAAAAATCA
TAATATGCATCAGTTAACATAGTTCCCAGGGTATTTACAAATTGAAATGGGCCAATCATT
TTTCCAAAATGAATCTATTTTCTTCACAATATTGCTTATCGGCATAAATATATTAGAGTT
ATATGTTTGCGGGTCTGTGAGATAAAACCTGATTGACATAATAAGGCCCTACTTCTATAA
GGATAATGCAGTCATATACATTTTACTTTGGATAATTGCATGATAGTAAGTTAGCAACAT
AGAAGAGTTATGACAAGAAGAACTTAGTGGTCGAAGGCTGCAAGAAAATGCTTATTAAGG
ATATCCTACCTTGTATTAGAAAGTTTGGCATTGGACCAAACTCTTTCCTGGTTTGTTTCC
TAGAACTTTTTTAGGGGGCACGAAGCAATTTCGTCAAGCTATTGCATTCAACCACACACA
AGTCTTACCAACTTCTGTTTCCCCGGGACGAGACTTAAACAATTAAGTCTCGTCTCGTAG
AAACAGATGTTGGAAAGACTTAATTTGACAACCGCATTCACGCAACATGATTGTTCAATT
GTAATATACTTCTGATACTAAATCATCTTAATGCACTATAGTTTACCTATAGCAAAGAAT
GACAGAGCAAGAGAAAACCAAAGGAAATGGATGCACTATGCTGCGTGATACAAGTGGTGA
GGGCAGCATTTGGGCAACATCAAAATTCTTTTCCACACCGACGCATAAAGATGAAAATTC
CTCCCATCTCACGTGCTCAAAATTTTCGAGATGAACGATAGAGATCTCTGTGGAACCGTA
CAACCTCGCATGGATATCTGGACAGGTCCCAAGTCCCCGCTTGCAATATCTCGCAAGATA
ACAAGATCCGGTAGTTCCAATCGAAACATTTCACACTTGAAAGATGCAAGGGTTCCGATG
ATCGATAGACCGGGTCAGACCCTCCGGGTAACCATGGCAAGAGCAAGATCTCGCGTTCCT
GGCAAAGATGGGATCGAGGGCTGCTTACCGTAGCGCGCCCAGAGCTGAGGCTCGACGCCG
GAGCACTCGCGGATGAGGACGGGGAGGGTGGGGTTGCGGGTCTTGATGTCACCATAGTTC
TTCTTCACGAACTCCCTGCGAATCAGATCACAAATCCAACACCACGACATGAGGGACGAA
TCGATTGCAGAGAGAGAAATGGGGGAAGAGAAGCAGGTGCGTGGGTGCTACCGGGCGGGG
CCGCTAGCAGGCGAGGACTGGCAGAAGAGGAAACGGATCTCCTTCACGTTCCGGGATAGG
CTCGCCCGCCACGCCATCGCCGCCGGTTCCTTCTTCCTTGGATTCTCTTCTATTCTGTTC
TCGAACCCCTTCGCTGCCCGAGTTGTATCTTCCTCTGCTGGGGAAGCCCAGCTGCAGCTG
TCTCGTTGGGTTGGATTCACATCCACGCCGTCCGATGCGGAAAACGGTGTATGGCCGTCA
GATTAGGGTTCCGCTCCACAAAAGTATATTTCCCCGGAGAAAAAGATAAAACGATTTCCT
ACGAGTGACCCGGCTCAAAACTGCGCCGGTCGCCTCACGGACACGAAGCGCCATCATGCT
CTTGGATTTGACTACATAGCCGCGCCGCATCATCGTCTTGTCGTGCGGCCGCTACTAATG
AATAATCACTTACGATAGCGTGTCTCGCTGCGAGCTCATAAAATACAAAAAAAAGTTGCA
TGCAGTGGCAGACTATCGCAGAGGTGCAAGGCAGGCATGCATACTCCAAAAGTCACGGGA
CCGACAGTAAACTAGTGTCCTGTGCTGCGCATGCATACTCCAAAAGTCACGGGACCGACA
GAAAACTAGTGTCCTGTGCTGCAATACAAAGGAATAGGGTCCTCAAATCCATCCTTGAAC
GTTGCATGCAACTGTTAAATATCACTATTTTTTCTCCTTGACCCTAAACTGATAAGTTGT
TCTTGGTTGTCAGGTTTAAACTTCTTACTTACTACATTACAAGTAGTCAAGTTTAAATTG
TCAATTCCCAAAATTACGAACTACTTAATTACCAAAATTTAAACATCTTAATTGTCAGAT
TGTAGGTACTTAGTTTCCTGTTCTTACAAAAATAGATGTCAAATTTACATGTA