Contig Data
morexGenes
Links



Map Locations of contig_87688 (4216 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_87688

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79926 1 1748 bp AK375388 Available Available None





CDS Structure of MLOC_79926






Contig Sequence (4216 bp)

>contig_87688 4216 assembly3_WGSMorex_rbca.fasta
TTCGAGTTCCTCGCCAAGGCCTACCTCGGAGTAGAGGTGCATGAGCTGTTCGGGGCCGTG
GGCTCGTCATCATCATCAGCCGCAGCAATATCCATCGAACCGGGGCCGGCGAGCAGATAC
GAAGCGGAACCGGGGGCTCACCTCTGGATCACCTGCAGCAGGGGGTTGACGACCCTGGCG
CTGAGCCACGCGAGGACCACCGCCATCTCTTCTCTTCCCCCCTCCCTCCGCGCGGATCGG
GGCCCGGGTTGGTCGATAGGCGAACCGGAGGAGCGAGGCGGGAGGAGGAGGGCCTGAGGG
CCGGGGAGGCGGCGGAGACGCGGCGGTTAGGGCGTCGTCGTCGGCGACGGCGGCACAGGG
GAACGCCGTCGGCGCAGAGTGAAGGGAGGACGGAGACGGCGAGCGGGCGCCGTTAACGGG
CGTCTGCGCGGGGGCGTCAAAGGTGGCCATGCTGGCACCTGACATGTGGACCAGCCTTGC
CAGAAAAACGGTTAGAAGAGCTAAATCGGGCAGTTAAAACTTTTGCTAATCTTTTGTCAT
TGATTAGGAAGATTTTGGTAGTTTTTCGTATAAAATTGTATTGTGGTACCTACTGGACAC
GGTTGCGCAAAATGTGATAGTTTTTGACAATTTACTCACATTCTATATAGAACTATCTTG
TGTAATTCTTTTTTTTTTCAAGAAAACGCAAAGACTGCGTTTCTTTTCATTGAAAAGGGA
GAGAGTTTAACAGTACACGCCTCCGAAAAGGAGGCTCACAGGGGTGCAAAACGTCCCAGG
TCAGCGGCATAATCACTCCAAGGCCACTAGCCCCAGCCCAAACCCAAAGGGATGCCTCCT
CTCTGATTCTTGTCGCGAGCAGGGTGGTGGATGCCTCCTCGCCATCGAACACACAGGAGT
TACGGTGTTTTCAGAGCATCCATGCCGTCGGGTGAGCTGTCGTGGCTAGGCCCTTGCGCA
TGGGTTTTGGCGTCTCCGGCTTGGCGTGCATCGACCAATCGTTCAGTGTGACCTCTTGGT
CTGATGATCGGCAGGTCAGCCGAAGCCAGGAGAGCGTCTCATGCCATACCTGTCGCGAGA
AGGGGCAGGTGACCAACAGGTGGCGCATCGTTTCAGGCTCTTGGTAGCACAAGATGCAGC
GTGGAGGGTGCTAAAGGCCGCGGCGGCGCAATCGGTCCGCGGTCCAGCACCTGTCCAGAC
TGACAAGCCACAGGAAGAATTTGACGCGTGGCAGGGCCCAGCTCTTCCAGGTCAGCTTCC
ATGCATCGCAGCTAGCGAAGCCGTGGAAGGCGGCCAGATAGGCGCTGCGCGCAGAGTAGG
AGCCGCTCGAGGTCCACCTCCAGATTAGCTGGTCTGGCTGTGTGTAATTCTGAACTCATA
ACTGGCCCGAAGTGTGGTAATATCAGCAGCATTCGCTAGAAAGAATAGAGTTAGTTTTTA
CAATGCTTTATTAAGAGTTAAACTTCAATAAGATCGATACGTATGACACCATGAGCACAA
CTTTGTTCAAATCATTCAAATAGTCAGGTTACATGCATTTACTGCTAAAAATCACTAGCA
TGAAACACCAGCATAGAAGCTACACAGTACAAGGTTCAGCATGAAGAAAGAAAAGGTACC
CCTTGGATCATATGGTAACACTGCCCCCACCATCCCTGTGTTCCGACATTACCTACCATC
TAGGATAGCTGGGAGCATGGAACAACGACGAAACTCAGGCCAAGTCAGTTTTGGTTTTGC
AGCACGGGAGGGCGCCGCCACATGGCATCTACTTCGAGCATCAGATACAACAGCAGATAC
AACGCCATGGAGGAACAGGAACTATGAAGATTGGTCCTTGGCGACATCCTCACTTTGGTC
CTTGGCGACCTCCTCACTCGGTCCATCTCCGGCAGACGTCGTCGTTCCGTCCAAGAAGCG
AACAATGACGACGGTGATGTTGTCAGCACTGCCCCTTCGGGAAGCTTCTTGAAGTAGTCC
CTTCGCTGCTTGCTCTGGATCCTCTATTGGCTTGACCATGGCAACAGCTTCCTGGAAGGA
GAATATTTGGATTAACCCATGGAAAACTAGAGGAAAATAGCACCATGTCAATGAGAATCT
TCAGTAAATATGCACTTACATCGTTAGTTACAACATCCCACAGCCCGTCACTAGCGAGGA
TGAGGAATTCGAGTGAGCTGTCGACCACCTCCTCCTGTAAATACATAAGAAGTTCAATCA
ACATTAGTAAGAAAGGGTACCCATTATTTCTTCCTTGCACAAAAACAACGAAGAATTTGG
ATGAAAAGTTACATTGCACTGGTCAATAAGAAATCTCTATAAAGAGACTACCTAGAATAT
CTAATCGAAAACCTGCAAGTCTAGGTTGTAGTTGAGAACTAGGCAAGGAAACAAAAGCCA
AACCTTGATCTCTGGGTCAGCTACAACATACTGCTTTAAAAGTTTATCACCAAAGGCTCG
AGAAACAGCAAGAACACCACCAACACGCCATGTCCCTGCAAAACAAAGAACAGTAAATAA
ACAGGAATAAAGCTAGTAATAAGCACCTGCTGAAGTAGGGAGTTTTTTTAGGCCTCATAA
AAATACCAGCCCACATCACAAAGCCTCCAGCTTCCTCAATTCTCTGTCTCTCGTCTGTCT
GGTCAGGTTTGTGATCCCTGGAAACCGCAATAGCTGAAATGGTGGGGTGCAGAAAACATC
ATGATCATCTAACGCAAGTGAATGAAATGAGATAACATGACATCATGTTATGCAGTTAAT
TTCAATGCCATGTACCCACGGAGAAAAACTACAACCATATGGACTTTCCGATGAAACCAA
GAGTGCACGAATCACAGTATTACAGACACTGGACTTACCCTTCCCTCCTTTAGAAACAAC
AGCTCTAGAATCACCAACATTTGCAACCACCAAACGACCACCGACAAGAATAGCTGTTGA
GGCAGTTGAGCCAGCATCTCTGGTGTGGCTACTATCAGCTTTCAGAAACTCTGAATCGGT
ATGATTGAATGTTTCAGCTGCAGAAAAGAAACACAAGGAAATCTTGATCACACTCTGCCT
GGGTAGAAATATTTTGGTCCGCGATAGTTTATGCATGATAGGCATACCAATAGCAGCCTT
TGTATCTGTCATGAATTTCGGATGCTTGATTAAATTGCTGAAAAGGTGCTTCTTCACATA
TTCAGCTGCTCGAGCTCCACCGTGACCTATAGGAAAAGCCAACTATACTAGTAAACACAG
TTGATCAAGGAGCTGCTGACATATGAAAACCCTGAACAATTAATATATAAAAACTGGCAC
AAGGCATCACATACCATCAAATACGCCAAACAACCCAACAGTCTCTCCATCAACATCATC
CACTCTTGTCTCGTAGAAATCCTCCATTGATGCCCTTTTCCCAGCACAGCTTGCGAACCC
ATAACTGAACCTGCCTTTTTCACTGCAATGGCAAGTGGGGGAAAAACAGTTTAAACACTT
AAGCTCACGGCACATATTATACCACAGCATTTCGTGTGAAACCAGATGCGTCATACTTCC
TTCTAAAAACACGGCTACTTTCTGAACTTCCAATGTATGAAACAGAGTATTTTGAGGTAA
CAGTTTCACATATTTTGTCTTCACTTTCATCAAATTTTCTTCCAAAGTATACAAAAGCAC
GCGTGAGTAAATTTGCAGAGTCTTGTATTAAGTAGGAGTATCTCACATAGATATGGTTAT
TATACATGCCATGGATTTCCATCTGCTGTGATTATTTAATGAATCTCTCACTATATCTCG
CCATAAATTACAGTTGATTAAAAACCGTGTGGACACGAAGATGGTGAATCAGGTACGGAG
ACACGGTAATACTGCAGTTAATACAAGGGCCAAATTAGATCGATATATTTCATTTTCCCA
GATCCTCGCGGCCGGACTTGTCGTACATGTGGCATACGATCCCTCAGAAAATTCATTAGC
ACCCAAAACGCGAGCATATTATCATGACAATGAAATCACCGACGAATTTCAATTCGCCAA
TTGGACAGATCCAAACGAAAGGGCCCAGACGGATTCGCCCATACCCACTCGACGCGCAAA
CCACCAGGCACGGCAGAGGCAAGAGGCAGCCTACCGCGCTGCTCTAAACAGATACGGATC
TCTCCTCCTCTCCCTCTCGCAAAGAGGCTACCGAGCCACGCGAGCACCGGGAACGAATCA
GCGAACCGAGAGAAGC