Contig Data
morexGenes
Links



Map Locations of contig_87276 (6291 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_87276

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79857 1 1778 bp AK250457.1 Available Available None
MLOC_79856 1 1169 bp MLOC_79856.1 Available Available LOC_Os03g02390.1, FRAME:+3, EVALUE:3e-69, 13103.m00195 protein mitochondrial import inner membrane translocase subunit Tim17, putative, expressed





CDS Structure of MLOC_79857






CDS Structure of MLOC_79856






Contig Sequence (6291 bp)

>contig_87276 6291 assembly3_WGSMorex_rbca.fasta
GTGACTTAAAGGAAGCAAATTTGTGGCACATTGTATGTAGGGACCTAACAGTGCAACTAA
TGTTAGAAGCAAATTAGTATTGCCATGGAACAACTTTTCTAGTGGATGGAAGCAAAGTTT
TCTTGTGTTTGAAACATAATAAGAATATGTATATATATATATATATATATATATATATGT
ATGTAATTTGAATTTCCCATGTGGAAACAAATTCTTTGATGGCACAAAAATATTTGTTAC
GTAGAACAAATTTCAATTGCAATGGCAATAGAAGCAAATGTGTTGTGAGTGGAAGCAATT
TTTTATTATGTTGGAGTTAAAATTAAATGTTACACCGGATGAAAGTTATATTGCATTGAA
GAAATGAAAGGAGTTTTTGTTAACATCCAAAAAACATTAGATATTTTCTCTCAAAACAAA
TAAGTAGGAAATTTAACTAGCATAAGATGAGACATCGTCACTTTTTCAAGTGATGGAAGC
ATGTACAAGTGCAGAAGTGGGATGTACAAGGCGTACATTCCCGGAGCAGTTACAAGGAAC
AAGTGGCATGTTGGGTAAAAAAAAATAGCATTAGCATTCTTCTTGCATAGATCTATGCTA
CTAATCCTACGGTCGCAGACTGGTCTGATAGACGCTAGGGATCAGTAGTCTTTGAAGTTA
AAATCTGAAATCTGAAATGCATTAGGGCTTGACTTGACTTGAGGGATCGGCCCAGCACAC
CGGCCGGGGCCTTGGTCATCATGGGCCTTGAGCCCACAGTCCAGAAGACGGTTGGCCTCT
CCACCAAGACAAAGAGAAGAGTCTTCATTCTCGTCCGTCCGTCCGTCCACGAGCCCAAAC
CCTCTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCTTTCTTTCTTGCACCCCACGCCCA
CCGCCGCCGCCGCCGCCGCCGCCGTCGCCATGGCCGATCCGCGGCTGCACCCGTCGGGGT
CCCGCGACGAATCCGACGGCCGTCGCCTCTACGACCCGTACCAGGACCTCAACATCCCCA
CCGCCTACAAGAACCTCTACGACCTGCCCACCTCCCCCGAGTTCCTCTTCCAGGAGGAGG
CCCTCGTCCACCGCCGCTCCTGGGGCGAGAACCTCACCTACTACACCGGCGTAGGATACC
TCTCCGGTGCCGTCGCGGGGGCCGCGCTCGGCCTGCGCGAGGCCGCACAAGCCGCAGAGC
GCGCCGACACGGCCAAGATCCGAGCCAACCGCCTCCTCAACTCCTGCGGCTCCGCCGGAC
GCCGCGTCGGCAACAGGCTCGGCGTCATCGGACTCCTCTACGCCGGCATGGAGAGCGGAA
TGGTCACCGCCCGCGACGGCCACGACGACTGGATCAACAGCGTCGTCGCGGGACTCGCCA
CCGGCGCCCTCTTCAGGGCCGCACAGGGGCCACGCTCCGCAGCCGTCGCCGGAGCCCTAG
GTGGGGTCCTCGCAGCCGCCGCCATGGCCGCCAAGCAGGCTGCCAAGAGATACGCGCCCG
CCGCATTCTGATTCATGCTCCCTCCCTCATGGTATCACATCACATCACATTACAGTACAT
TACTCGCTGCCGCCGCCGCGATCAATCGAATCAGAATCCGATGGTCGGAACAATTGTTTG
ACAAGGGATGTACTAGTTTCTTCTTCGTTCATACTGTATTATTATTTGATGAGAAGGGTC
ATCTTCTCGACAATTATGGTATTATTAAGTGTTATGCTATATGCAATCGATGCCATCGGT
ATCGGATCAGCAGACGAATTTTTGACATGCCTTGTTGCAATGTAACATCTTCTTCATCAC
TACAACTTAGTTAGCGACTTTGTTGGTGGGTGCCAGACTTAATAATACAACTGTCAGCGT
TTACATTATGCTGGAGAGTCCAGGACATTGTGGAATGTAATGTTCATTTTGTAGATAATT
TGGCTAGATTGTCGTGGTGCTTGCTTTGCTTCGTGTGTGATAAAGTATTTGGCCGCAGAA
TGGTTGATGAATTGGGTATTTCTCTCATGTTTCTGCAGATTGCTATTGTTACGGAACGCT
ACACTGCTAACTTGAATAACTAGAGTCCATGAAAAAGCTGAGCTTTTTTGCATGCTAGTA
TTGCACACCTTGGGTCCTTCTCTGACCCTTCTGCATATGTTATTGCTACAGAATGTTGTA
GTGCTAATTCTGATGACTAGAGTTGATGAGAAACTTGATCCTTTTGCATCCTGGTATTTT
AACAACACATTCTACTAGAGTCCTTTTCTTAACTTCATGCATGAGTTGTTACAAAACATT
CTGGTATTTGGATCACATAGTTATTTTTTTCACTGCTGCCTATATCCCTTATTCAGTAAT
ACGACATTCTTCCCTATTTCAATCCTGGCAGTTTGCTAGTGTTGGCATATACATCCTGGT
GTAGTGGTGCACTCTTCCAGATTTTAATGTTACTAGATTGGTGTTCTACTTATTTCCAAT
AACTTTGTGAAAAAATTGAGTTTTTTTGCATTCAGTATTGCTCAGTGGCCTTCATTCTAG
ACTCCTAGTGTACATTACAATTCTTGCTTATTTTATTGTTACTGCAAGTTTCCAATAATT
TGGTTAAAAGCTGAGTTCCTTGCATTCAGTATTGCTCAGTGCATTCAGATCTTTCGGCAG
ATGTTATTAGCGCTGAAACTGCTGTTTCTCTTGATTAAAAAAAAAAAATTCGATCGCAGG
GTTCTTTTTTTTTATCGCAGTTATTTTACATTTCTTCCCGTATCCCTTTAAAAATCATTA
TGCTCGTCTTGGCCATTTGAATCCTGGCAGTTAACTAGTACTGGCATATATATGCATCTT
AGTGTAGATTAATATTCTTGCAAATTTTATTGCTACAGCAACACTCTAGTGCTATTTCAA
ATAACTTGATGAAAACCTGAGTTGTTTGCGTTCAGTGTTGCACAGTGCATTCGAATCTTT
CCGCAGATGGTATCATCACTGAAATGTTTGTTGTGCTGTTACTGTATCCATGAAAAGTTG
AGCTTTGTGCATTTTGGTATTTACATACAAAATAAAAGTGGGTCACAGGGTTGGTTGCCA
TTAGTCGCTCTCTATCACATTATGCAAGTTCAATTTATCCCATTTGGGCCTTGACAGCGT
ACTGTTAATTTGCTTGCGCATCTGTCGCGTACATAACTCTTTGATTTGAAGACAATTTGG
TCAGGTGTTTTGAGTTTTCATACGAACCTACATGTTTTGCATATGAATCTTTAGCTCAAG
ATGTTGTGCTGTGACACCATGTACATTGTTGTTGATGTTCCAGCCTATCAATCAGGGCAT
CATTCATGTTGTGCTGTGACACCATGTACATTGTTGTTGAATCGAGTTGCTCTTGCAACA
ACCTTTGGCTTTGCCTTGGTCTTTTACCGGTTTAGCCATCGTAATTGTAGCGTATTGTAC
ATGTCTTGAACCCATTCATTCCTTTGTGGCAAATGTGTTTAGGTCTGCGAAAGGCCATAA
ACCGCCTTGTAGAGGAAGAAAATTTGTATGTATGATCCTTGCTTCATTGGTAATAATAGA
GTCCACCACCCAAACCGATCGATCACACATCGACCTGGGAGTGCGATGCCTACACCTGAT
GACCTATCCATTTACGCGATAAGTAATTCAGGACAAAGTGATATTAATTAATTAATTAAA
AACGTTCATACAATCGTCTGTTACAACTTCAGCCTCACAAGACGAAAGACTAATTAAGAA
GCACACCATCAGCCCTATGAACAAAACTGAACTTTATAAATGATGAAGCACACCATCAGC
CCTATGAACAAAACTGAACTTTATAAATGATTACGCATATATAAATACTAAATAAATGAA
AACATCAAGTTCAATGATTTTCTACGAGTTGCATGCATCTATGATTACCCAGGAAAATTC
AATACCAGCATGCAAAGCACAAAAGAACATGAGACACAACATATAATTCCTTTTTTTTTT
TGCAATAGATTCACTCAGATATTGTTATCTGGTGTAATAATAATATATGTATAGCTTGGA
CAAAGATATTCGTAGCACATTAAACACAAATAATGCCATGCCGATGAACAAATCAGCAGC
CTCTCAATTCTTCCTCCCAACTATGTATTCATCGATGTCCTCGTGTGCCTAGCCAATAAT
ATTGATCTACGCTACAGAATAAATATTACAAGCAAAAAGCATCTTGCTTTCCCCACTTCC
ATCTTATTCGGCACCCAGGCAGGTGGAGTATTCAATCAATGGCGTATCTGATTCGCTCCC
GATTCTGTTGGCCTTTTAAGGATTTAGCGGCTCGTCTTCCCCGGTCATCTCTTGTGATTC
TGCATTATGGTTGTTAGCAGTTAGGGAAACTGAATCAATACATCGATCAGAAAAGAACAC
ACTGGTTGTTTTCAACTCCGCTGGAACAAAGGAAAAAAAACAACTTACTTGTCGAGAGCT
TGTGTAGGTCAGCCACAACCATCAGCCGTCTCTGCAAGATTGCCGCCATGAAGAGGAAGA
TTGAACACATGCCAAACATGACGGTGATAGGGAAAGCATTCACCTGCAACATAATGATGT
TTATTAGGCATCCAATGGATATGGTGATAATGGTTGCTAAAAGAACATTTTGCTCACATT
GTAGAGCACCACACACACAAACAGGTTCAGTGGTATGCGGAAGAAGTTCATGATGGTGCT
CCTTGCCTCCTCAGGGATATACTGAGATCTCATCTTCATGATAGATGGCCAGAAAATGCC
AACACATGACTCAAAGGTACAGAAACCAAGCAGCTGCAGGGAGCCACCGAACGATATGCC
GCTTCCTTTCACTGAAGACGCCGGCACCAGAAGCTGTCACACATGCGAAAATGCTTATCA
GTAAGAGATGTTAGAATGGCAGAGAAAGAAATGAACAGTAGAGGTGAGCCGTGGCCTTAC
GCTGGTGGCAACTGGGAGGAAAAGGGTGAAGGCTGATACTGCAAACACGATCTGCATATA
ACCTTCAACCTTCATTTTCCGGGCCAGTAGGCGTGAGGCAATGGAGCTACCCAACATAGA
TGACAGCATGAAGGTAGCGAATATAAAGCCATGGGGAATGTCTTCGTCGTTCGGGCTCAA
TGCTGGAGTCCAGAGGAAGACAAAGGTGTACATTGAGCCCTCGAACAGCGACTGAATGGC
TCCCAGCAATGCGATTTTCTCATCTGAAAATTTGTGATTGCCGTTAGAATGCCAATTCTA
AGTTGACACTGCAGTCCAATGAAGCGCTAACTGCTAAGCATACCTGAAGCAATCGCCTTA
GCGGCAACCTTGAACTGGGACATCAAGTCCTTGCCTTCAGATTGATCTCCATAGTTTTCA
CTCCATGAAGACATGATGATGGCCATGCCTATCGCCAGGAAGCACGCAGCGGCATCAAAG
GGAGCCACGGGACCGAAGCCCAAGTTGTCAGCGAGCAGGTTAGCAAACAGCCCGGCTATA
ATGGCGATGAGACCATTTCCGAGGAATATAGCCTTTGAGAATGTGATGGACAGCCACTGC
GGGTCATAGCCTCTCTGTGAAACAAAAACCAGTAGTACAAATTAGCAGGGTATATTATAA
TGCATAGTTTGCAAATGACAATGATATCTTATCAGCTTTCGGCGAATGACAAGGATTTCT
GGTTAGTTAATCATTGACAGCAGAGCCTTGGATTAGGGGCAGAAGAAGAAGACTAAATTG
AGTGTCACGTGCTGCAGATACTGTAGTGGGATCCTTGGATTCTCTTTGTTAGGATCCTAA
TTGTGAGCACAGTGAGTGTTAATTGATAATGGCGACAGCACATGGGCGAATAAAAGGACA
ATGTTCCAGTTTGGCTGGGAGACCCGGACCCCAACCAAAGAAAGAGCTTTTACGTATTAT
TTAAGCTGGGCCATGCATGCCTTGGTTAAATGCCAATGGGAAGTCGGCAACCACCTGAAA
TCCTCATCTATCTATTCCACCGACACACAAGGACAAGTGATTGATTGATGAAACAAAACA
AAACATGGTGGATTGCATCATTTAAGCTTGCATTGCAGGCAGCAGGCTCATTTCATTGCA
GTCTTTTTTTGTTTCAGATGCTGACAATAGTTAGTGAGGCAGTAAGTAAGTATCCTACTC
CCTCTCTCCAATATTTAAATATAAGTCTTTTTAGAGATTCCAATAAACAAGAACATACTG
AGAGCAAGTACAATAGTATAGCCAGNTGCTGGCTATAAGCCATTGACATGTCATCTATAG
CCCGTCTTATAGCCAACATGTACAATAGTTCATTGCAAAAGTGTGCTACTT