Map Locations of contig_87151 (9381 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_87151

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79833 1 400 bp AK368102 Not available Available None
MLOC_79832 1 869 bp MLOC_79832.1 Available Available None





CDS Structure of MLOC_79833






CDS Structure of MLOC_79832






Contig Sequence (9381 bp)

>contig_87151 9381 assembly3_WGSMorex_rbca.fasta
TTCCTTGCACCTCAAGTCATGTGTAATANNNNNATGCCCCTTGGGCCTTCAATATAGACA
AGTTGCTTTCCTAACAGAAATCACAACTCAAGATTTAGCATCCATAGCACATGGGCCTCA
CCACAGCTAAACCACATTCATAGTAAAGTAATTTTTGCAATGAAAATCGCGAGGAAATAA
CATGATATTCCAGATTCACAGGTTTCATCTAAATGCATACTGCATCAAACACAGATATAT
ATGCAAAAATCCCATCCGTTCCTCCTCATCAATCATATATAGTGCAGAGTGTAGATAATC
TACACTCTGCATGGTCTCAGGCTATGTCACTATTAACATTTTCAGTTCAAAGGTGATGCT
GTCGCGTGCCAACTCTGATTGACAAATTCAAGCACAGTTTACCAAGATATGACAAGGAAT
TATTCAGCATATGAAAAACTATGAAAGTTTCAGTGAGCAAGTAGAGAAGCTTTCTGAAGG
CCCACTTCTTTATTCAGAACAGATCCCTATTTGAACTCAGCATTTGTCAATCTTAGAAGC
CAAAAGTTTTGAAACTAAAAACCAATGTCCTGATGCTCGACTGGCTATACTACTCCACAC
ACTATAAAGGGTCAATAAATTTGAATAAAATTGTAAAGCAAACTACGCTCAGTCTAAATA
TATATTGCTTTCTCCTATCTCTACAACCATAATGTCACCTCGGTTTTTTGTGATCGGAAA
ATTAGGAAGAACATTAAAGGCAAGTGCTAAGGACATGTGTCGACTATAGTAACCATTTAT
TCAAGTTGACCTCCAATATCAAAATGTGATAGATATAATATGAGTTTGCTTCACGAAAAA
GATATTTGCTTGTACTCTGGTGATAGATATAATCGTTCATAAGATAACCAATGTTTATTT
CGATAAACCGATGCATATCTTATCCAGTTTCAATTACAGTCCAGCTAAATGAATTGAACC
GAATTAAAATTGTACACAAGAGTAGAAAGGTAGTAGGATACAACAAAAATTATTTACAAC
TCAAACCATAGCAATCCTAACTCTTCTCTTTGAACATCAGAGCAAGAATTTGAAAAAATG
ACCATTTGGCGGTGACTCGGATGAGCCTTTATGCCATTGCATTAGTTAAAGCATGTGTGC
AAAATAGTAGCCATGGAATGATATTGGTAGGAACAAAAATTTAGGCCAAGTTTTTAAGAT
AATCATGCATAGGAGGATGGGACTATTTCAATTTTGTTCTGCTAGGGGGGCTCCAAGTTC
TCTGTCTCACCGGCCTACTAATATTACTCATGTTAGCACGAAAAATTCAGTCCCGCAAAG
CTGCAAACAATGTAACAAAAGCACAACTGCATCAAAGTACTCCCTCGTGTCAAAAATCAT
CTTATAAAAAGTTACAGAGGTAGTAGATCGGAAGATGAAAAAACAGATCAGCATTATAAG
AAACATAGATAGATGAGTGGGTGAATAAAATAACTGTTTCTCCTAAATCTAACATATCAG
AGTATGCGCATGTAGGTACTAAAGTTACTATACAAGTGCAATGTAGTTTCTTCAAGATTC
AATAAGCTAACAACCATGCTTAACACATTGTCTACACAAATGCTACGAGGATTTAGATTT
TAATACTAAAAGAGAAGTTCCAAGGAGCTACACAATTTCCTTGATTTACATTCAGTTTAG
ATATTTGGATTTGTTTGAAGGAGTGTCTTTATGAAATGGATATGTTTAGTAAAAACAAAC
GTAAAGAAAGTTGGCATTGTTTTATCCTTACCAATTAATGTGCATTAACAAAAAAGTGAA
ACTTCTTAGTAGCAGGTTGCACAAGTGAAAGCAGGCTTCCTTGCACTAGATATAAAGAAT
GGATTAAAAATATTCTGCGGACTGATTTATTTTGTCATCCACAAGGAAGTTGCTCTGCTC
ATGGAAAAAAACAAAGAGAAATGAATAGCCATGAAAATTAATCAATTAAACTACAAAGAA
AGTTAGAAAAGTGGGAATAATGTTACCAAGTAGGGAATGCAAATATTCAGCTACATCAGA
GAGGACGCACATGTGTTGTGACAGGCAAGAGATAGGAAAAGACTTCATCCCAAATTTTAG
TGACATTAACCAGCAGTAATTCATTGTATGATAATGATGTTGCGCTGAGGGCCAGGCCAT
CCTCATCTTCCGTCTCCTAGTCCGTCAAGCCATCAGCAGTAATCCGTAGTCGTTGTACCA
GGGGCAGAGAGGTGGTAGCAAACCTGTGCAACAACATCGCCTGGGTCAGCACCAATGATG
AGTTGATGATAGAGGAGGCAGACTCAAAGTTCGTATGCAGTTCTAATTCTTTAGGAAAAA
AAATCAAGGATGATGAGTTCCAACTTCCAAGGCAGCTGACTAGTACACTTCGAGTTCATA
CAAAAGACAATCCAAGTTTAAAGCTGATGCATTCATCAAAAGCAACATGCAACAAAAACT
AATTGATCACATTAAGCAAGAAATTAGGGGCACATGCAAAATTAACTTCCAAAAAGCATA
TTGACAAGTAGAGGCACTCCATTGGACGTTGTGCATCATCACACATGACGGGTGATCAAG
CTAGCCAGAACCAAAATCACATGCTTAACCATGCGTCTAACATTGCTGAAGAAACTCAGA
AAGCCAAAATTGCCTACCGGCAGTGAGGTAGGAGGAGACATGTGCGAGAGCAGCGTCGAT
GTTGCGCTCATGATGATACAGGGGAAGTGGACCAGTTTGAGGTCCTCTCGTAGACCTTCC
TCGAACTCCGGGTGTGGGTCGTCGTCAGAGTAGAAATCCATCAAGCTGCCACGATAGCAG
TAGAGGTGCGGGCGGCAGACGCGAACGCGAGCAGGGCGTACAGGGGTGCCACGACATACA
GAAAAGTGATGGTGAATTGGTGATGGCGACGAGCCTCCGATGATGGCGCGACGGAAACCG
AGACGTGGGCATCGTGATTGCGGCAGAGAAGCGCAGATTGGCATGCAGAGGAGAGTGGCG
CTGGGGTGGCATCGCCCGCAACGAGATCTGCGGCCACCGCGACCGCGAGGCGGACCATGA
GGCGGATGAGGGCAGATCGAGGTGGTGCGCTGAAGAGTACGGGGTCAAGGGCTCAAGGCA
ACGGCGAGGAAATGGAAGTCAGGGGCTTGGGAGATATGGGTGACGTGGACGTGTGAGGCG
GTTCTCCTTTTTGATTTATTGTTTCCCAAGTCCTTAAGGAGTGTGCATGCTCCGAGCGGC
CGCACGAGAGCCGTAGGATCTGTACGAGACAAACAGGCGCGACGTGATACAACAGTTACC
CGAACGGCAGGGTTTGTCGTTTTCCTTGGGATTTTTTCCTTCCGAAACTCCATTTTCCCC
ACCCATTTGTTCGTCCTCCTCCTCCAGCCATTTTTCTCTTTCTGCCACAGTGGTAAGATA
TTCGTCGCCTATCGGTGTTGATGCGGCAGTGGTGAGGTATGGAGGAGTCGAGGTGGATCC
ACAGCGGGTTGCTGGCCACTCGATATCGATAGTTGAAGTGGAGGAGGTCGCCGCGCTACC
GCGCATGGGAGGAGGCGCATCCGCATGGTGACGGAGCTCGCCGCCAGCAGCTTGAGCGCC
CGCGGTTGGGGAGGAGGCAAGTCCGCACGGTGACAGAGCTAAGCCGCTTATAATCAACAG
TCGCAAGGTAAGTCCCAACAAAAACCAGGGGCTAGGCAGTTATGTGGATTCATGTGGAGA
TTGAGAGGCAATTTTTCATATCCATCACGACATATTTTGTTTGCATTGCTGGAAAATTTG
AGGGGCATTCACGTAGCTAGTCAATTACGTGGGTCCACAAGAAGGATTGAGAGGCGAGTT
ACCAATCCGTCACAGGGGATTTTGTGGTGGGTTGGGAAATTTTGTGGGGAATTCAGACAG
GGTGTAACCATGTGGATTCATGGGAGGATTAAGAGATAGACATTTTTGCATGCAACGAAT
AAACATTTTTGTTTATCATGCAAGAACCATTTTATTGATTTTGTCTGGCAATTTTACATG
CATCAAATAAGGCAATTATATATACTAAATAGATGATATTTTCCTGTCAAGATGACACTT
TTGGGTAAGAACAAGGTTGTCTGGAACTAAACTGAACAAGGCGATATAGTTGGCTCTTAT
CCCCTACAGTTCGACGCTCATGAAATCTGCCTCTAGGCAGCAGCAGCATCAGTTAGTCTG
GATTAGTATCGTTAGACTGGATTAGTGTTACAGATTTAAGTACCATGGCATGGTACTAGT
AGACATATCTGAGGGATAATAAATTTGTAAGTGCATGATATTGGTTGATCATGCAATGTA
AACTTCACCGATTATATACTAATAGTACACACGTGAGATGACTTTGTAAATGACATATTA
GCTAATCAGTCCAGGGGTAATAGAGCAGGAGCATTTTCAGTCATCATACGGGGAAAACTT
TTATTTGAAATTAGCTTGCAATCTTACATGCATCAGTCAGGCAATTATGCGCTAGACAGA
GAAGACATTTTCTACTTTTTTTTCTTATTTTCAAAACTAGAAATAAATCCTTTCTACACC
AGCTAGTTAGATGATTTTTCTGAACGATTGCATGCCTGTTTTCCTTTCTTTGCAGAGATA
TGACTGACACCATTCGGGTGATTGGGGGGAGATGCACTCGCCTGAGGCATGAATGAATCC
AGATGGGACATGCAATACGAGCAGCTGCCCAAGGACGCAAACACCGAGGTAAAAACGTGA
ACCATTATGTTCTCTATGCATCACTTCTGCTCTGTATGGATCGACAGGCGCAACATAGGA
AACAAATGCGTGCACGGCGTGATGGTCAGTTGGAATGTAAACTTCCTTGATTGAATCATA
GATTACATGTACAAAGCAATATATAGGAGGGAACTGCACGTCCTATACATGTGGTTGTAG
TGGCCGACGTGGTCTACCCTAGATCCTATTCTTATGCTACATATAACGTTACAAGAGTGT
CTAACACCCCCCTCAGTCGGAACACCGTTGGGGAGGATGTTCAGGCTGTAACGAAAATCT
TTAAAAATGGGAGATGGTAGTCCCTTGGTGAAGACGTCTGGAAACTGAGAACTCGAAGGC
ACATGGAGGACGCGAACTTCGCCAAGAGCCACCCGATCGCGGACAAAGTGTAGGTCAATC
TCAATGTGCTTGGTACGCTGATGTTGCACCAGATTACATGCAAGGTAGGATGCACTGATG
TTGTCACAATACACGATGGTGGCCCGTGTGGGAAGGAGATGCAGCTCATGGAGAAGTTGG
CGCAACCAACAGGATTCAGCCACACAGTTGGCCACGCCATGATACTCTGCTTCGGCACTA
GATCGAGAGATGTTGTGCTGTGTCTTGGAGGACCAGGAGACAAGGTTCGAGCCGAGGAAC
ACACAGAATCCAGAAGTTGACTTACGGGTATCCGGGCAACCATCCCAATCTGCATCAGTG
TAAGCAATAAGATCCCTGGAGGTAGACTTATACAGTTGGAGACCATAGTGGGAAGTGCCC
TGTAGGTATCATAGAATGTGTTTGACAAGTTGCATGTGACTATCGCGTGGAGCATGCATG
AATAAGCAGACTTGTTGAACGGCATACGCTATATCATGCCGAGTGAGAGTGAGGTATTGG
AGAGCTCCGGCAAGGCTGCGGTATTTGGTGGGATTAGATAGGCGTTGTCCGTCCTGGGAG
GAGGCCTTGGAGCTAGTTTCGATGGGTGTTGAGACTGGCTTATAGTTTAGTATCTTGGCG
CGCTCGAGGATATCTAGTGTGTATTGTTGTTGGCATAGGAAGAGACCCGAAGTGTGGGTG
GTGACATTGATGCCCAAGAAATGGTGGAGAGGGCCAAGATCCGACAACAAAAATTCTGAT
TTTTGGGATGTGATGATGGAGGCTAGGATGGCGGATGAGCTAGCCGTGACAATGATGTCA
TCGACGTAGACTAGCAAATAAGCAAGATGCCTGCCACGTTGCATAATGAACAGAGAGGAG
TCACTCTTTGAAGCCTTGAAACCCAATGACAAGAGAAAAGCTTGGAACCGAAGGAACCAT
GTGTGTGGAGCTTATTTGAGGCCATATAAGGATTTGCGAAGAAGGCAGACATTATCTGGC
CGAGAAGAATCCACAAAAACTGCCAGTTGGGAGGAATACACCGTCTCGTGGAGGTCACCA
TGCAAAAATGCATTCTTGACGTCGAGCTGGTGAATTGGCCAGGACTGAGGTGGCAATGCT
GAGCACCACGCGGATGGTTGCCGGTTTCACGACCGGACTGAATGTTTCACCATAGTCGAC
GCCCTCTTTTTGAGTGAAGCCGTGAACAACCCATCTAGCTTTGTAGCGAGCCAATGAGCC
ATCTGGGTGGAACTTGTGACGAAAGATCCACTTGCCCGTGACAATGTTAACACCTGCAGG
CTTAGGCACCAAAGACCAAGTAAAGTTATCCATTAGAGCATGATATTCTTCTAACATAGC
TTGTTGCCAATGTGGGTCTTTGAGGGCTGATCTGTATGTGGGTGGTATGGGTCAGATAGG
TTGGGATATGGAAGTTGCAACAAACAAATGTTTGGGCATGAGGGAACCGGTTTTGGCACG
AGTGGACATGTTGTGTACGTTTTGGGGTGGCCTAACTAGTATTGCATGGGTATGGATGCG
TGGTGCAGGCGGAGTGGACCGCGCGGAATGCGAGGAGGACTCGGTGCAGCCGCCGGGTCT
GTTGGCGGGCGAATCTTGTGAGGAATGTGAGGAGGAGGCAGGCGAGCCAGTTGTGGGAGG
CGAATATGGTGGCAGGGAGGCAGGTGACATGCTGCTGGGGCCGGGCGACGAGACCGAGGC
GGAGTGGGCGGGAGAATCGGTCGAGCGAGGTGGGTAGGAGTATGTGTGAGCTGCAGATAC
GGGGGTGGGTGGATCACGAGGCGGATCAGGAGGTAGTGGGGCGTGGGGCCCGTACGAGGT
TGGTTGGGCGGGATCCAGAGAATCCAGCCGGTGCATGGGATCTGCATGGCGATCTGGTGT
GGACGTGGGAGTGGTGTGGTCTGGTGTGTGTGGGCGGTACGGAAATACCGTTTAGTTGAA
AACGTCATGGCGTGACACGATAACACGACGTGTGGCGAGGTCGTAGCACCCGTATCCTTG
TGCTCCAAGGGGTATCCGAGGAATATGCAAGGTGAGGAACGAGGGGATAATTTGAGATCC
ATTGTGGCATGTAGGTTGGGGAAACACAAGCACCCAAAGACCCGAAGGAGGGAGTAATCT
GGTTGGACGCCATGGAGGAGATAGTACGGTGTGTATGGTGTGATGGCGCGAGATGGTCAT
CGATTTAGGAGATATGTGGCGGTGTTTAAAGCTTCTACCCAAAATGGAGGTGGTAATGTG
GCTTGGAGAAGTAGAGTACAGACAATGTCGTTTGTGGTGCGAATAAGCCTTTCCGCTTTG
CCATTTTGGGGGGATGTGTGAGGGCAGGAGAAGTGACAATGCCATTGTTGGAGAAGAAGG
AATGAAGAGACATGTTGATGAATTCACCGCCATTGTCGCATTGCATACTTTTGCTGATTA
CATTGAATTGGGTGTGAACAAAGGTGAAGAAGCATTGTAGGACGGTAGATGTATCAGATT
TTTGGCACAATGGAAACGTCCATGAGTAGTGGGTGTAGTCATCTAGTATAACAAGATAAT
ATTGATAACCGGAAAAGCTTACAATGGGTGATGTCCACAAATCACGGTGAATTAAATCAA
ATGGGGCAAACGTTTTGCTATGAGAGGAGGGGAACGGAAGCCGTGGTTGACGCCCTAGTT
GGCAAGCACTACATGGTGAATGAGGATCTTTATTACAAGAACTAAGAAAGTCTCGAGAAA
TGGAAGAAAGGGTAGTGGTGGTGAGGAGGCGATGCCATAAGTCCGAGGTGGTGGTGAGGA
GGGCCGACGCCAGGGCTGTTTTTTGCCGACGAAGGGGTAGAGATCGCCGGTGCTAGCGGA
GATCATGAGAACCTGACAAGTGCGAAGATCCTTCACAAGAAAACCACATGGAAGAAAATC
AACAGAGCATGAGTTATGTTTGGTAAACTTGCGTACGGAGATAAGGTTAGTCACAACAGT
GGGAGAGACAAGTATGTCCGTGAGGCGAAAGTTGTGTGGGTGAAGGACTGTGGAGCCGGT
GGCCATGACGGGGAGATGATGTCCATTGCCAACGAGAATGCTAGAAGGAACATGCTGTAA
TGAATGACTAGACGAGGTTAGGATACCTTGGGTTCCGGTCACATGCGAGGAGGCTCCACT
ATCCAAGTACCACTCGGGGGCGGGAGGCGGGTTGATGGCGGAGTTGCTGAAGGCGGCGTT
GAGCTTGGCAAGGTGCTCCCACGATGGTTGTGTGGGTTGGTAGGGAAACGACGTCGGCGG
GGGAGGGTACATGGCATATGCGTGGGCGTGAGCACCGGGGCGGGGTCCCAAAACACCAGC
GGCATTGGGAGGGATCCAACCAGGGCGCGGTGATGGCAAGGCCATGCCGTATGGAGCGAA
GTAGCCGGTGAAGGGAAAGAACACCGGCGGAGAAGACTGGTTGCATACAGAAGAATCGTT
GCGCCCGCGGCCACCATCGCCGCGGCCACGTCCGACGGGTTGTTGTGGGGGGTGCGGGTG
GCCCTGGGCGCGGTTGGAGGAGGTGTGATCAGAGGGGCCGGTGCTGGGGCCGCGGTCACC
CGATCCACGAGCACCGGCCTCGGAGCTGCTACCTGGGCCGCGGCACCATCGGGGAAGGCG
AAGGCCGAGGCACTCTGCTCGGCGGCGCGTTGCGCTTGCGATTCCTCAGTGAGGACTACC
CTGGAGAGGACGGTGTCGAAGGGCAGCTCCTGGTCGCCCAGGACGACGCGAATGGTGTCG
AGGCGCTTGTCCAGTCCATGGAGAAACTGGGTGGTGAGGCCGGTTTCGCAGACGGCGTGG
TCGATGTCAGCGAGACCGTCGGTGAGGAGCTTCATGCAGGGCGCGTACTCGGAGACGGGG
ACATCACCTTGCTTGAGGTTTCAGTACTGCCGGTTGAGGACCATGAACTGGGCGACACGA
TTCGCGAGGAGGAAATCTTTGATTTTCTTCCAGATGGAGTAGGTGGTGGTGGCGCCGACG
ACGTGGTCGATCATGGGATCCACAAGAGTGGCATAGAGCCAGAGGGCGACATGGGCATCG
AGCTCAAGGTAGGCAGCATCGGCGTTGGGAGGCGGAGGGTGTTCGTTGAGGTAGAGGACA
CCGTAGCGGATCAGGACCATGAGGGAGAAAGATTTCCACTTGTGGTAGTTCTGATCGCGT
GAGATGAAACTTGATGTGATTTGTGATATGGTCAGAGAAGATGGGGTGGTGTGGTATAGG
TGTGGCCGGCGGCGACGGCGG