Contig Data
morexGenes
Links



Map Locations of contig_87007 (3016 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_87007

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79804 1 292 bp AK354016 Not available Available None
MLOC_79803 1 426 bp MLOC_79803.1 Available Available None





CDS Structure of MLOC_79804






CDS Structure of MLOC_79803






Contig Sequence (3016 bp)

>contig_87007 3016 assembly3_WGSMorex_rbca.fasta
CCTCGGCAACCTTCAAGCGGAAGTCAGTCAGAGTTTGTGTCCGGTCCATTTCCTCCTTGA
ACAGGTTGTCGCTTTTAGCTAGCAGTTTGTGAAGCTTTTCAATAGCTTTTTATTGCTTAG
TGGAAATATTAGCAAGTTTGTAATACCTAAGTTTTTTATATTCATCAGGCTCATCACTTT
AATCAAACGAGGAAGCATGTCTGAGTACCTAGGCACCTTTTTCCTTGAAGCAATAGGTGG
GGGCAGAGTCGTCATCACAATCATCAGTATTGTTGATGAAATCTTTTTCTTCAACTGTAT
ACAATGAGGAATCCAGGGATCTTGAATAAATTCCAACTGAGAGAATACCTCATGATTCCT
CATGGTCTTGAATCGTCAAAGCAAGTTTATACATTGAGGAATCAAGGGATCTCAGCAATT
TCTTCACCACCTCATGATCGGTGATGTCAGTGGCACCAAGATCTTGGAGATCATTGGAGA
TATCCGTGAGGCGATCGGAAGTTTGCTGAACATTTTCTTTGTTGAGTCTTTTGAAGCAAT
TGAAGATATTTTGAAGAACATCAACTCGAGAGTCATGTTGAGTTGAGATTCCTTCGTTGA
CCTTGGACAACCTGTCCCAGATGGGCTTTTCGGATCCCAAAGCACTCACTCTATTATATT
GACATTTTCTCAGATGGCCACATACGATGTTCTTTCCTTGAGAGTCAACTTGCTAGAATC
TCTTCACATCAGCAGCTTTGATAGTTGGGGTGACGGAGGGAATACAATTTTCCACAACAT
ACCATAGATCGTTGTCGATTTCTTCAAGATGCGTGCACATCTTGTTCTCCCAGTAGGGGT
AGTCTATCCCTTGATAGGTAGGACACCCCACAGATGCCTTGATTAGAACTAGTGTGTCAA
ATGATGGATCNNNNGATCGTAGCAGTTTCTTCACAACTTAATGGTCAGTCACTACAAGAA
ATATGCTAACTTGCGACCTTCAATATTGTTCACCGAATGGTTGTTGATTTCCATTTGCGA
CTTTTTTACGACCAAAAACAGACGGTCAAAAGCTGAGGGTCTCTAATGAACTATAACGAC
GTTTCTTCTCGAATGGTCGAAGACATTTACGACCAAATGAAAGCTTTGAAATTATTTTGG
TCGTTGGTTTTCTGCCCAAGCCACATCGGATCCAACATGGCAAGCTGACGTGGAATTTTT
TTGACCAAATGAATGGGTCATAGACTAGAATCAGCCCGGTCTAGTTTGGTGTTTTAGATG
GGCCGAGCCCATTAATTCAGCCTTTTTAAGTCATTTTTATCAACCACATGGGCCAAGGCC
AACAGTTTAGTTTTTTTTGGGCCATGGCCTTCTTACAATCAATTGATTTTTATTTCCAGC
CATTATATTTTAGATTTTTTCCCACTAGTTAAATGGGTCCCACTTGTCATAATTTCATAC
ATCAGTCCCACATGTCAAAAATTTCAAATTGCTCAAATTATTTTCAATGATTCCTACTAC
TCAAGGTTCCGTTTCGCATTTGTTCAACATAGATAATCACTATTTCAAATAGACCAGAAC
AAAAATAATTCATCAAATAACAATAAATTAATATATTACAATCTGCTAGATATTACAATT
TACATTCTACTATAGTCAAACTGATCAAACAAATCTTTGTTGACTAGGGCTTCACTGCTT
TGCACTTGGTTTCACGGCTTCAAACTTCAAATTTCATAGGCTTGGGGCTCCTATAAAAGA
GTGAACATAAATGCTTCTAGAATTAGATTGTACTGAAATGGCATCACTAATGTAAGCATC
AAAGCAGATCTAAAAAGGCAAACAAAATATGAATTATGGTGCACTTAATAAGATGTGATC
AATTTCAATACATGTTTAAGTGCACTAGTTTAAATACAATAGGCCAGCTTTATAAGGAAG
GAAGAAACACTTCACACATCCATCTAATCAGTTTCAAAACTAGTTCAAACGCCACTGTAA
TTAGATGACCATAGAGGTGACCAGGAGCATGTAGCATACTTCATGTTCAAATGTGTTGAA
CCCACAAAGCCAGGCGACTGGGTATTTTAACTGTTTATTAAAACCTGTTATAAGTTGGAC
AAGAAAAATAGTAAAAGCGACATTTCCTAACATAACAAGTGAAGCACAGTAGCAAGCCTA
ATTAATGGCCGGTGCTGGGAGTGCTGAAGACAAAACATGCATTATCTAATACATAGGAAA
AATTTTGATTTTCCAAATGTTTGAAGGCATTACCATGCAAAAAAGTTTGATTTTCCAGAT
CCATTTGCACGAACTTTGACAAACAGTTAAATCAATGTCAGTGCACCAGCAGAAAAAAAC
AATGCGATGAACTCTAAAGTGGACTTCTATGATACTTACAATAAACTGATACTTAATTGA
GTACTTAACCAATATGTCATCAGGGAAGACAAAGAATGGAAATCTCTACCATGGAAGCAA
TAATGAAAACATGATAGAGTGAAAGGTTTTAACGAAAAGAAGTCATCACAAGAACATATT
TCATTTATTAATTCGAACGTGAGCTTGCCACGTTGGATCCAATGATAGCATAAGCACACT
ATACAGACTAAAACTCAAACTCCACCCACATTGCTCTCTGTATAAACCAGTATAGAATGA
AGCACATAAAGTTAGTACATGCTACCAGAACAACACTATGCCCATCAAGAACGACAAAAT
AAACGAATTTCACACATTCTAATGTCGGGAGATCTGCTTCCAGAAAACCACTATGTCAAT
CCCAAGACTAGACTACAAAGTACTGGATGAGATATCATCTACTTGTACTACGAAAGCATG
TGTAAGATGTTAGTTAACAACATCATAACCAGTTGAATCTAGCACCTAATCAATGATCAA
CCACCAAACAGTATGAAGCAAGCACAAAAAAGGGGATTACCTCTTCTTGTGGCGCTTTGA
GTGCTAGTGATCATCCTTCACGGCATCGTCCACGAACTAACGACTACAGCCACTATCGTG
GCTTTGTCACGACAGA