morexGenes - Barley RNA-seq Database

Contig contig_86942

Source Contig contig_86942

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_86942 (2294 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_86942

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_79788	1	989 bp	MLOC_79788.1	Available	Available	None

CDS Structure of MLOC_79788

Contig Sequence (2294 bp)

>contig_86942 2294 assembly3_WGSMorex_rbca.fasta
AGGCCGCCGCTGCGCGTGCGCCACCCAAGCGGCGTCTCCCGCGACTCCGTCTTGACGGGA
AGGAGCGTCGGCAACCCGGAGGAGCCGGAGCGGGAGCCGGACGAGGAGGAGGATGCCGTC
TCCATGCGCCTCGTCGTCCATGAGCTGTCACGGTGGCGGGAGAAGGAGGGGGCGCTGGGT
ACTCCAACTGCGGTGAGTTGTCGTCCTTAATCTGCTCGAGGACGGCGTCCAGCATGCAAC
CGGGGACACCCCACCATAGGCGTCGCCCCTTGGAGTTGAAGCGGCCGCGGGGCTCAGCGT
CGTTGGTGGCGGCGAGTTGTTCGACGTGGCGGCGTAGTCCGCCTCGTAGAGGAGGCGGGT
CTCGGACTATGCAGGTGGCGGCGGTCGAAGCCATTTGCCGCCGCTCCGTCGTCGGGGTAG
CGCTCGGTCATGGTGGTGGAGAGAGGGGGCGTCGATGGTGAAAGAGGGAGAGAGTCATTG
GCAGCGAGAAGGGGGTGAGAGGTGTGCGGCCACCGGTGAGGGAGGGACGGCTTTATATAG
TCGCGGGTGGGCGGCGAGCGGTCGGCAGCTGTGTGTATGCGTGGTGGGAGGGGGCGGACG
TGCATCGGCGCGCCTTCACTGCGTCGCCCGTGAAGAATCAATGGAAGGTTAACCGGTGGC
AGCCTTCGCATTGATTTCCCGCGGCAAAACGAGGCGATGAGGACGAGACGATAGCGCCTA
GTCGCTGACTTGGCGGGCCCACGACGAGTTCCCGCTAAAAACATTTCCTCAAGTGACCCT
AGCGCGTCGGGTTTGGCCTACGTCAGTCGGCGGCAAAATTGGCCCTAACCGATGAAAAAT
GGGCTTGTGAGAACGCGACTAGGCCGTTTTCTTAGTCTCGGCCTGTCGGGGATGCAGTTG
GAGATGCTCTTGCTCTGGTATGTAGGCGTAGTAGTACTTAATTAGTAGCTAGGCATTGTA
ATGAACGTGTATGGGTGAGCAGTAGTGCGTACTTGTTTTGGACTGGCAGCATGCAAGTAG
CATCTGGCCAGCCAAGATGGTTGATTCCATCTTCCTAGTATGATCCAGCTCTGAAATATT
GATTTGAAATGCTGCGGTGCCAATATGATAGTGAATCATCTCTATTGATGTTCGAATTGT
CCCTGAAATGCAAAATGTGCATGAATGGTGCTAATGTGCATGAACGGTGCCAGTATGATA
GTGGATCTTCTCTATTGATGTTCAGATATGCATTCTTTGGCCTGAATGCAAAAGATAGCC
TAATCTCAATACAGTTTCACTGCTCTTCAGATATACAAGTACAAACTGGCTGTTTATATA
TCATCGTACCCGTTTGATCATTTCAGGAAGCCTGAAATCTCAGCATTCGGGCAAAATGAT
AAAGATCCTTGGATGCATGAAAACATGGGAAACTGTAAACCAAGCCCAGTAGCCATGAGC
CTAATGTCTGCACCTTGAGCTGCACCCCGGTCCATCTTTTCCATCTGCAATCAGGTGATA
TCTGCAGCCAAAGAAAACAACTGCTTCTTATCATGATTTAAAAACTAGGGTCAGGTAGTC
AGAAATCCATGCTGAGCCAAAAAAATCAGATGCCTCTTATCACAATTAAAAATGCATCAG
ATGGTCAGCATCTATGTTCAAAAAGTAGCAAAAGAAAAAATCAGCTGCTTCCCGTGCACT
AGTTCAATTGCAGAGGACTCAAACATTTAAATGTTGAAATTGGGGAAACGTGAGACACCC
AGGTCTCAAAAGGGCACCACATCCTCATATTTCAAGCTTGGTTCAATTTGCGGAGCGTAC
TGCAAGATGAAGTGATTACAGCTATGGGATTGGGGAAAGTTCCATCTGAGCATCGAATCA
CCTCATGGTGGGCATTTGACAGTTGACATTCAGAGATGCAGGGATGGTTCGAGTGTACTG
CAAACTGAAGCCAACACGGTCGATTTGGGGGCAGAATATTAAAGCGACGAACAATGGGAA
ATGGGGAACAAAGTGACAAGATTTAACAACAGAGCAAGAGATTGAAGGCGAATTCAAGGA
CAAAGCGCTGAGATTTCCATTCCATGCTAATGCTAGCAGTAGTACATCGAAACAACAGAC
AGCAGCGAGATGCGGCCATTCCGTTACACCGGAGACAATGAAGACTGAACAACAACCATG
GCTAGCTACGAATCCGACGGCGCGAGGTGGATCCGACCGGAGCGGCGCGGACTAGCCGCC
GAATCCGTAGAGGGTTCGCCCCTGTCGCTTGAGGGCGTAGACGACGTCCATGGCGGTGAC
GGTCTTGCGGCGGG